RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 NRXN2Q9P2S2 1712 aa22.78■■□□□ 1.24
MBD3-204ENST00000585967 SRP68Q9UHB9 627 aaKnown RBP22.78■■□□□ 1.24
MBD3-204ENST00000585967 A0A0G2JLW4 131 aa22.77■■□□□ 1.24
MBD3-204ENST00000585967 FKBP8Q14318 412 aa22.77■■□□□ 1.24
MBD3-204ENST00000585967 NARFQ9UHQ1 456 aa22.77■■□□□ 1.24
MBD3-204ENST00000585967 A0A087WZG4 1122 aa22.76■■□□□ 1.23
MBD3-204ENST00000585967 FCHSD2O94868 740 aa22.76■■□□□ 1.23
MBD3-204ENST00000585967 PRKAR2BP31323 418 aa22.76■■□□□ 1.23
MBD3-204ENST00000585967 NEFMP07197 916 aa22.75■■□□□ 1.23
MBD3-204ENST00000585967 DPEP1P16444 411 aa22.75■■□□□ 1.23
MBD3-204ENST00000585967 USPL1Q5W0Q7 1092 aa22.75■■□□□ 1.23
MBD3-204ENST00000585967 ZNF790Q6PG37 636 aa22.75■■□□□ 1.23
MBD3-204ENST00000585967 PIM2Q9P1W9 311 aa22.75■■□□□ 1.23
MBD3-204ENST00000585967 ZBTB1Q9Y2K1 713 aa22.75■■□□□ 1.23
MBD3-204ENST00000585967 HEG1Q9ULI3 1381 aa22.75■■□□□ 1.23
MBD3-204ENST00000585967 U2AF1L5P0DN76 240 aaPredicted RBP22.74■■□□□ 1.23
MBD3-204ENST00000585967 U2AF1Q01081 240 aaKnown RBP eCLIP22.74■■□□□ 1.23
MBD3-204ENST00000585967 RTF1Q92541 710 aaKnown RBP22.74■■□□□ 1.23
MBD3-204ENST00000585967 DLG5Q8TDM6 1919 aa22.74■■□□□ 1.23
MBD3-204ENST00000585967 CEMIPQ8WUJ3 1361 aa22.74■■□□□ 1.23
MBD3-204ENST00000585967 PPP2R1AP30153 589 aa22.73■■□□□ 1.23
MBD3-204ENST00000585967 FMNL2Q96PY5 1086 aa22.73■■□□□ 1.23
MBD3-204ENST00000585967 RSPH6AQ9H0K4 717 aa22.73■■□□□ 1.23
MBD3-204ENST00000585967 BCORQ6W2J9 1755 aa22.72■■□□□ 1.23
MBD3-204ENST00000585967 DDR1Q08345 913 aa22.72■■□□□ 1.23
MBD3-204ENST00000585967 DALRD3Q5D0E6 543 aaKnown RBP22.72■■□□□ 1.23
MBD3-204ENST00000585967 POLRMTO00411 1230 aaKnown RBP22.71■■□□□ 1.23
MBD3-204ENST00000585967 CANXP27824 592 aaKnown RBP22.71■■□□□ 1.23
MBD3-204ENST00000585967 ARHGAP27Q6ZUM4 889 aa22.71■■□□□ 1.23
MBD3-204ENST00000585967 IL17REQ8NFR9 667 aa22.71■■□□□ 1.23
MBD3-204ENST00000585967 ZNF526Q8TF50 670 aaPredicted RBP22.71■■□□□ 1.23
MBD3-204ENST00000585967 SBF1O95248 1867 aa22.71■■□□□ 1.23
MBD3-204ENST00000585967 TM4SF1P30408 202 aa22.7■■□□□ 1.22
MBD3-204ENST00000585967 LAMB4A4D0S4 1761 aa22.69■■□□□ 1.22
MBD3-204ENST00000585967 BTBD11A6QL63 1104 aa22.69■■□□□ 1.22
MBD3-204ENST00000585967 ZNF496Q96IT1 587 aaPredicted RBP22.69■■□□□ 1.22
MBD3-204ENST00000585967 IL6STP40189 918 aaPredicted RBP22.67■■□□□ 1.22
MBD3-204ENST00000585967 NFIXQ14938 502 aa22.67■■□□□ 1.22
MBD3-204ENST00000585967 ZNF330Q9Y3S2 320 aaPredicted RBP22.67■■□□□ 1.22
MBD3-204ENST00000585967 HTATSF1O43719 755 aaKnown RBP22.66■■□□□ 1.22
MBD3-204ENST00000585967 EIF5P55010 431 aaKnown RBP22.66■■□□□ 1.22
MBD3-204ENST00000585967 PHACTR3Q96KR7 559 aa22.66■■□□□ 1.22
MBD3-204ENST00000585967 CCDC88AQ3V6T2 1871 aa22.66■■□□□ 1.22
MBD3-204ENST00000585967 TNRC6CQ9HCJ0 1690 aaKnown RBP22.65■■□□□ 1.22
MBD3-204ENST00000585967 PDZRN3Q9UPQ7 1066 aa22.65■■□□□ 1.22
MBD3-204ENST00000585967 ANKRD31Q8N7Z5 1873 aa22.64■■□□□ 1.22
MBD3-204ENST00000585967 SERPINB2P05120 415 aa22.64■■□□□ 1.21
MBD3-204ENST00000585967 KCNA3P22001 575 aa22.64■■□□□ 1.21
MBD3-204ENST00000585967 PNNQ9H307 717 aaKnown RBP22.64■■□□□ 1.21
MBD3-204ENST00000585967 CACNA1SQ13698 1873 aa22.64■■□□□ 1.21
MBD3-204ENST00000585967 CARMIL3Q8ND23 1372 aa22.63■■□□□ 1.21
MBD3-204ENST00000585967 NPHP1O15259 732 aa22.62■■□□□ 1.21
MBD3-204ENST00000585967 CHRNA5P30532 468 aa22.62■■□□□ 1.21
MBD3-204ENST00000585967 KDM3BQ7LBC6 1761 aa22.62■■□□□ 1.21
MBD3-204ENST00000585967 H0YIN7 160 aa22.61■■□□□ 1.21
MBD3-204ENST00000585967 TIAM2Q8IVF5 1701 aa22.61■■□□□ 1.21
MBD3-204ENST00000585967 ARFGEF2Q9Y6D5 1785 aa22.61■■□□□ 1.21
MBD3-204ENST00000585967 SNRPA1P09661 255 aaKnown RBP22.6■■□□□ 1.21
MBD3-204ENST00000585967 BICDL1Q6ZP65 573 aa22.6■■□□□ 1.21
MBD3-204ENST00000585967 BCL2L12Q9HB09 334 aa22.6■■□□□ 1.21
MBD3-204ENST00000585967 C9orf131Q5VYM1 1079 aa22.59■■□□□ 1.21
MBD3-204ENST00000585967 MCM10Q7L590 875 aa22.59■■□□□ 1.21
MBD3-204ENST00000585967 ZNF652Q9Y2D9 606 aa22.59■■□□□ 1.21
MBD3-204ENST00000585967 COL11A2P13942 1736 aaPredicted RBP22.59■■□□□ 1.21
MBD3-204ENST00000585967 CEP350Q5VT06 3117 aa22.59■■□□□ 1.21
MBD3-204ENST00000585967 DICER1Q9UPY3 1922 aaKnown RBP22.59■■□□□ 1.21
MBD3-204ENST00000585967 KDM2BQ8NHM5 1336 aa22.58■■□□□ 1.21
MBD3-204ENST00000585967 MAPK8IP3Q9UPT6 1336 aa22.58■■□□□ 1.21
MBD3-204ENST00000585967 ZC3H4Q9UPT8 1303 aaKnown RBP22.58■■□□□ 1.21
MBD3-204ENST00000585967 PDE6BP35913 854 aa22.58■■□□□ 1.21
MBD3-204ENST00000585967 TTLL6Q8N841 843 aa22.58■■□□□ 1.21
MBD3-204ENST00000585967 SETDB2Q96T68 719 aa22.58■■□□□ 1.21
MBD3-204ENST00000585967 C2CD5Q86YS7 1000 aa22.57■■□□□ 1.2
MBD3-204ENST00000585967 PNISRQ8TF01 805 aaKnown RBP22.57■■□□□ 1.2
MBD3-204ENST00000585967 RNF181Q9P0P0 153 aa22.57■■□□□ 1.2
MBD3-204ENST00000585967 TBC1D2BQ9UPU7 963 aa22.57■■□□□ 1.2
MBD3-204ENST00000585967 HSPA6P17066 643 aa22.56■■□□□ 1.2
MBD3-204ENST00000585967 ST5P78524 1137 aa22.56■■□□□ 1.2
MBD3-204ENST00000585967 DZIP3Q86Y13 1208 aaKnown RBP22.56■■□□□ 1.2
MBD3-204ENST00000585967 C16orf71Q8IYS4 520 aaPredicted RBP22.56■■□□□ 1.2
MBD3-204ENST00000585967 KIF3CO14782 793 aa22.55■■□□□ 1.2
MBD3-204ENST00000585967 A1BGP04217 495 aa22.55■■□□□ 1.2
MBD3-204ENST00000585967 TAF7Q15545 349 aaPredicted RBP22.55■■□□□ 1.2
MBD3-204ENST00000585967 TBC1D9BQ66K14 1250 aa22.55■■□□□ 1.2
MBD3-204ENST00000585967 CNBD1Q8NA66 436 aa22.55■■□□□ 1.2
MBD3-204ENST00000585967 BRIP1Q9BX63 1249 aa22.55■■□□□ 1.2
MBD3-204ENST00000585967 FER1L6Q2WGJ9 1857 aa22.54■■□□□ 1.2
MBD3-204ENST00000585967 TOMM70O94826 608 aa22.54■■□□□ 1.2
MBD3-204ENST00000585967 RGL2O15211 777 aa22.53■■□□□ 1.2
MBD3-204ENST00000585967 KCNQ3O43525 872 aa22.53■■□□□ 1.2
MBD3-204ENST00000585967 CLEC4GQ6UXB4 293 aa22.53■■□□□ 1.2
MBD3-204ENST00000585967 NUP98P52948 1817 aa22.52■■□□□ 1.2
MBD3-204ENST00000585967 CAMTA2O94983 1202 aa22.52■■□□□ 1.2
MBD3-204ENST00000585967 RALBP1Q15311 655 aa22.52■■□□□ 1.2
MBD3-204ENST00000585967 LMNB1P20700 586 aa22.51■■□□□ 1.19
MBD3-204ENST00000585967 DCTN1Q14203 1278 aa22.51■■□□□ 1.19
MBD3-204ENST00000585967 PRR5LQ6MZQ0 368 aa22.51■■□□□ 1.19
MBD3-204ENST00000585967 USP16Q9Y5T5 823 aa22.51■■□□□ 1.19
MBD3-204ENST00000585967 NFE2L2Q16236 605 aa22.5■■□□□ 1.19
MBD3-204ENST00000585967 ZNF622Q969S3 477 aaKnown RBP eCLIP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms