RNA–Protein interactions for RNA: ENST00000585594.5

NEDD4L-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-212ENST00000585594 BRD3Q15059 726 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 E2F4Q16254 413 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 ZNF394Q53GI3 561 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 SOGA3Q5TF21 947 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 C9orf131Q5VYM1 1079 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 DUSP27Q5VZP5 1158 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 KRT77Q7Z794 578 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 TAX1BP1Q86VP1 789 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 ARHGEF25Q86VW2 580 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 IQCF2Q8IXL9 164 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 RPUSD2Q8IZ73 545 aaKnown RBP2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 MYO1HQ8N1T3 1032 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 KIAA1958Q8N8K9 716 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 JMYQ8N9B5 988 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 PMFBP1Q8TBY8 1022 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 SMCR8Q8TEV9 937 aaPredicted RBP2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 SMARCC1Q92922 1105 aaPredicted RBP2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 GLMNQ92990 594 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 BHMTQ93088 406 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 TEKT1Q969V4 418 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 CCDC102AQ96A19 550 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 CDHR1Q96JP9 859 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 ZNF396Q96N95 335 aaPredicted RBP2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 AGAP3Q96P47 875 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 IWS1Q96ST2 819 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 PIF1Q9H611 641 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 RMI1Q9H9A7 625 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 AS3MTQ9HBK9 375 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 BRMS1Q9HCU9 246 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 CASS4Q9NQ75 786 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 IFT57Q9NWB7 429 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 USP25Q9UHP3 1055 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 HDAC9Q9UKV0 1011 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 IKBKGQ9Y6K9 419 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 DDX49Q9Y6V7 483 aaKnown RBP2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 SHTN1A0MZ66 631 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 H0YHG0 523 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 IFRD1O00458 451 aaPredicted RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 DNAJC6O75061 913 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 PPFIA2O75334 1257 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 VAMP4O75379 141 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 RNASEH2AO75792 299 aaKnown RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 TRIM37O94972 964 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 COL6A1P12109 1028 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 SKILP12757 684 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 ZSCAN20P17040 1043 aaPredicted RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 XBP1P17861 261 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 RPL17P18621 184 aaKnown RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 HSD3B2P26439 372 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 PIK3CAP42336 1068 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 MAGEA8P43361 318 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 TNNT3P45378 269 aaPredicted RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 TRAPPC10P48553 1259 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 GTF2A1P52655 376 aaPredicted RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 SARNPP82979 210 aaKnown RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 CHAF1AQ13111 956 aaPredicted RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 TMED1Q13445 227 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 RAPGEF1Q13905 1077 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 RASA3Q14644 834 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 AMOTQ4VCS5 1084 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 CCDC93Q567U6 631 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 NOM1Q5C9Z4 860 aaKnown RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 CCDC158Q5M9N0 1113 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 ODR4Q5SWX8 454 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 SWT1Q5T5J6 900 aaKnown RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 NUTM2GQ5VZR2 741 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 CCSAPQ6IQ19 270 aaPredicted RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 B4GALNT3Q6L9W6 998 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 PPP4R4Q6NUP7 873 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 KANK3Q6NY19 840 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 JAZF1Q86VZ6 243 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 RELL1Q8IUW5 271 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 CHPFQ8IZ52 775 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 MIER1Q8N108 512 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 MICALL1Q8N3F8 863 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 TEX19Q8NA77 164 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 PHC3Q8NDX5 983 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 FRS2Q8WU20 508 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 STAG1Q8WVM7 1258 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 C17orf50Q8WW18 174 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 TSC1Q92574 1164 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 TAF4BQ92750 862 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 CENPTQ96BT3 561 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 VMP1Q96GC9 406 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 CDK5RAP3Q96JB5 506 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 C8orf48Q96LL4 319 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 RMDN2Q96LZ7 410 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 TTC14Q96N46 770 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 MAP3K14Q99558 947 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 LZTS2Q9BRK4 669 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 TEX13AQ9BXU3 409 aaPredicted RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 TRIM6Q9C030 488 aaPredicted RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 PDGFDQ9GZP0 370 aaPredicted RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 IQCGQ9H095 443 aaKnown RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 DHX36Q9H2U1 1008 aaKnown RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 RWDD1Q9H446 243 aaPredicted RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 CD248Q9HCU0 757 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 MED4Q9NPJ6 270 aa2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 AVENQ9NQS1 362 aaPredicted RBP2.08□□□□□ -2.08
NEDD4L-212ENST00000585594 RABL2AQ9UBK7 228 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms