RNA–Protein interactions for RNA: ENST00000585535.2

PTBP1-205, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-205ENST00000585535 ZPR1O75312 459 aa15.18■□□□□ 0.02
PTBP1-205ENST00000585535 YBX3P16989 372 aaKnown RBP eCLIP15.18■□□□□ 0.027e-13■□□□□ 9.8
PTBP1-205ENST00000585535 FKBP8Q14318 412 aa15.18■□□□□ 0.02
PTBP1-205ENST00000585535 TAF7Q15545 349 aaPredicted RBP15.18■□□□□ 0.02
PTBP1-205ENST00000585535 MCM10Q7L590 875 aa15.18■□□□□ 0.02
PTBP1-205ENST00000585535 SRP68Q9UHB9 627 aaKnown RBP15.18■□□□□ 0.02
PTBP1-205ENST00000585535 PARP3Q9Y6F1 533 aa15.18■□□□□ 0.02
PTBP1-205ENST00000585535 MYBBP1AQ9BQG0 1328 aaKnown RBP15.17■□□□□ 0.02
PTBP1-205ENST00000585535 C4AP0C0L4 1744 aa15.17■□□□□ 0.02
PTBP1-205ENST00000585535 KCNQ3O43525 872 aa15.17■□□□□ 0.02
PTBP1-205ENST00000585535 NFE2L2Q16236 605 aa15.17■□□□□ 0.02
PTBP1-205ENST00000585535 KIF13BQ9NQT8 1826 aa15.16■□□□□ 0.02
PTBP1-205ENST00000585535 A0A087WZG4 1122 aa15.16■□□□□ 0.02
PTBP1-205ENST00000585535 IL6STP40189 918 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-205ENST00000585535 COL15A1P39059 1388 aa15.15■□□□□ 0.02
PTBP1-205ENST00000585535 SNRPA1P09661 255 aaKnown RBP15.15■□□□□ 0.02
PTBP1-205ENST00000585535 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
PTBP1-205ENST00000585535 C10orf71Q711Q0 1435 aa15.15■□□□□ 0.02
PTBP1-205ENST00000585535 CANXP27824 592 aaKnown RBP15.14■□□□□ 0.01
PTBP1-205ENST00000585535 DDR1Q08345 913 aa15.14■□□□□ 0.01
PTBP1-205ENST00000585535 USPL1Q5W0Q7 1092 aa15.14■□□□□ 0.01
PTBP1-205ENST00000585535 PELP1Q8IZL8 1130 aaKnown RBP15.14■□□□□ 0.01
PTBP1-205ENST00000585535 PNISRQ8TF01 805 aaKnown RBP15.14■□□□□ 0.01
PTBP1-205ENST00000585535 PRKRIP1Q9H875 184 aaPredicted RBP15.14■□□□□ 0.01
PTBP1-205ENST00000585535 BCL2L12Q9HB09 334 aa15.14■□□□□ 0.01
PTBP1-205ENST00000585535 POLRMTO00411 1230 aaKnown RBP15.13■□□□□ 0.01
PTBP1-205ENST00000585535 USP16Q9Y5T5 823 aa15.13■□□□□ 0.01
PTBP1-205ENST00000585535 MAPK8IP3Q9UPT6 1336 aa15.13■□□□□ 0.01
PTBP1-205ENST00000585535 DLG5Q8TDM6 1919 aa15.12■□□□□ 0.01
PTBP1-205ENST00000585535 A1BGP04217 495 aa15.12■□□□□ 0.01
PTBP1-205ENST00000585535 NFIXQ14938 502 aa15.12■□□□□ 0.01
PTBP1-205ENST00000585535 ZNF784Q8NCA9 323 aaPredicted RBP15.12■□□□□ 0.01
PTBP1-205ENST00000585535 A0A0G2JLW4 131 aa15.11■□□□□ 0.01
PTBP1-205ENST00000585535 KCNA3P22001 575 aa15.11■□□□□ 0.01
PTBP1-205ENST00000585535 BABAM1Q9NWV8 329 aa15.11■□□□□ 0.01
PTBP1-205ENST00000585535 PXDNLA1KZ92 1463 aa15.11■□□□□ 0.01
PTBP1-205ENST00000585535 KIAA1551Q9HCM1 1747 aa15.1■□□□□ 0.01
PTBP1-205ENST00000585535 RGL2O15211 777 aa15.1■□□□□ 0.01
PTBP1-205ENST00000585535 DPEP1P16444 411 aa15.1■□□□□ 0.01
PTBP1-205ENST00000585535 TMPOP42166 694 aaKnown RBP15.1■□□□□ 0.01
PTBP1-205ENST00000585535 RIPK4P57078 832 aa15.09■□□□□ 0.01
PTBP1-205ENST00000585535 MIS18AQ9NYP9 233 aa15.09■□□□□ 0.01
PTBP1-205ENST00000585535 PRAMEF22A3QJZ6 481 aa15.08■□□□□ 0
PTBP1-205ENST00000585535 GIGYF1O75420 1035 aaPredicted RBP15.08■□□□□ 0
PTBP1-205ENST00000585535 SERPINB2P05120 415 aa15.08■□□□□ 0
PTBP1-205ENST00000585535 EIF4A1P60842 406 aaKnown RBP15.08■□□□□ 0
PTBP1-205ENST00000585535 CLEC4GQ6UXB4 293 aa15.08■□□□□ 0
PTBP1-205ENST00000585535 NPM2Q86SE8 214 aaKnown RBP15.08■□□□□ 0
PTBP1-205ENST00000585535 TBC1D2BQ9UPU7 963 aa15.08■□□□□ 0
PTBP1-205ENST00000585535 NBPF26B4DH59 902 aa15.07■□□□□ 0
PTBP1-205ENST00000585535 CAMTA2O94983 1202 aa15.07■□□□□ 0
PTBP1-205ENST00000585535 LMOD3Q0VAK6 560 aa15.07■□□□□ 0
PTBP1-205ENST00000585535 NBPF10Q6P3W6 841 aaKnown RBP15.07■□□□□ 0
PTBP1-205ENST00000585535 NBPF15Q8N660 670 aa15.07■□□□□ 0
PTBP1-205ENST00000585535 RUNDC1Q96C34 613 aa15.07■□□□□ 0
PTBP1-205ENST00000585535 PIM2Q9P1W9 311 aa15.07■□□□□ 0
PTBP1-205ENST00000585535 ADAMTS8Q9UP79 889 aa15.07■□□□□ 0
PTBP1-205ENST00000585535 NRXN2Q9P2S2 1712 aa15.06■□□□□ 0
PTBP1-205ENST00000585535 THUMPD2Q9BTF0 503 aaKnown RBP15.06■□□□□ 0
PTBP1-205ENST00000585535 N4BP2Q86UW6 1770 aaPredicted RBP15.06■□□□□ 0
PTBP1-205ENST00000585535 WDR43Q15061 677 aaKnown RBP eCLIP15.05■□□□□ -0
PTBP1-205ENST00000585535 TBC1D9BQ66K14 1250 aa15.05■□□□□ -0
PTBP1-205ENST00000585535 DZIP3Q86Y13 1208 aaKnown RBP15.05■□□□□ -0
PTBP1-205ENST00000585535 PDZRN3Q9UPQ7 1066 aa15.05■□□□□ -0
PTBP1-205ENST00000585535 AFDNP55196 1824 aaKnown RBP15.05■□□□□ -0
PTBP1-205ENST00000585535 BRCA1P38398 1863 aaKnown RBP15.05■□□□□ -0
PTBP1-205ENST00000585535 KDM3BQ7LBC6 1761 aa15.04■□□□□ -0
PTBP1-205ENST00000585535 DALRD3Q5D0E6 543 aaKnown RBP15.04■□□□□ -0
PTBP1-205ENST00000585535 BCS1LQ9Y276 419 aa15.04■□□□□ -0
PTBP1-205ENST00000585535 SETDB2Q96T68 719 aa15.03■□□□□ -0
PTBP1-205ENST00000585535 BRIP1Q9BX63 1249 aa15.03■□□□□ -0
PTBP1-205ENST00000585535 TRIM35Q9UPQ4 493 aa15.03■□□□□ -0
PTBP1-205ENST00000585535 ZNF330Q9Y3S2 320 aaPredicted RBP15.03■□□□□ -0
PTBP1-205ENST00000585535 ADCY9O60503 1353 aa15.02■□□□□ -0
PTBP1-205ENST00000585535 CARMIL3Q8ND23 1372 aa15.02■□□□□ -0
PTBP1-205ENST00000585535 ERBB4Q15303 1308 aa15.02■□□□□ -0
PTBP1-205ENST00000585535 ZNF316A6NFI3 1004 aaPredicted RBP15.02■□□□□ -0
PTBP1-205ENST00000585535 CHL1O00533 1208 aa15.02■□□□□ -0
PTBP1-205ENST00000585535 CHRNA5P30532 468 aa15.02■□□□□ -0
PTBP1-205ENST00000585535 TSPYL4Q9UJ04 414 aa15.02■□□□□ -0
PTBP1-205ENST00000585535 ZNF652Q9Y2D9 606 aa15.02■□□□□ -0
PTBP1-205ENST00000585535 SCN7AQ01118 1682 aa15.01□□□□□ -0.01
PTBP1-205ENST00000585535 ERVV-1B6SEH8 477 aa15.01□□□□□ -0.01
PTBP1-205ENST00000585535 PIP4K2AP48426 406 aaPredicted RBP15.01□□□□□ -0.01
PTBP1-205ENST00000585535 BICDL1Q6ZP65 573 aa15.01□□□□□ -0.01
PTBP1-205ENST00000585535 CCDC146Q8IYE0 955 aa15.01□□□□□ -0.01
PTBP1-205ENST00000585535 WWC3Q9ULE0 1092 aa15.01□□□□□ -0.01
PTBP1-205ENST00000585535 ARFGEF1Q9Y6D6 1849 aa15.01□□□□□ -0.01
PTBP1-205ENST00000585535 H0YIN7 160 aa15□□□□□ -0.01
PTBP1-205ENST00000585535 PDE6BP35913 854 aa15□□□□□ -0.01
PTBP1-205ENST00000585535 PRR5LQ6MZQ0 368 aa15□□□□□ -0.01
PTBP1-205ENST00000585535 ARHGAP27Q6ZUM4 889 aa15□□□□□ -0.01
PTBP1-205ENST00000585535 RRP7AQ9Y3A4 280 aaKnown RBP15□□□□□ -0.01
PTBP1-205ENST00000585535 LAMB4A4D0S4 1761 aa14.98□□□□□ -0.01
PTBP1-205ENST00000585535 KLRG2A4D1S0 409 aaPredicted RBP14.98□□□□□ -0.01
PTBP1-205ENST00000585535 NEUROD2Q15784 382 aa14.98□□□□□ -0.01
PTBP1-205ENST00000585535 C2CD5Q86YS7 1000 aa14.98□□□□□ -0.01
PTBP1-205ENST00000585535 TTLL6Q8N841 843 aa14.98□□□□□ -0.01
PTBP1-205ENST00000585535 CNBD1Q8NA66 436 aa14.98□□□□□ -0.01
PTBP1-205ENST00000585535 BCORQ6W2J9 1755 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms