RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 VRTNQ9H8Y1 702 aa9.33□□□□□ -0.92
NF1-223ENST00000584328 PEG3Q9GZU2 1588 aa9.33□□□□□ -0.92
NF1-223ENST00000584328 SFI1A8K8P3 1242 aa9.32□□□□□ -0.92
NF1-223ENST00000584328 DKK1O94907 266 aa9.32□□□□□ -0.92
NF1-223ENST00000584328 FOXK2Q01167 660 aa9.32□□□□□ -0.92
NF1-223ENST00000584328 MROH2BQ7Z745 1585 aa9.32□□□□□ -0.92
NF1-223ENST00000584328 LORP23490 312 aaPredicted RBP9.31□□□□□ -0.92
NF1-223ENST00000584328 CRTC2Q53ET0 693 aaPredicted RBP9.31□□□□□ -0.92
NF1-223ENST00000584328 TBCELQ5QJ74 424 aa9.31□□□□□ -0.92
NF1-223ENST00000584328 SLC9A9Q8IVB4 645 aa9.31□□□□□ -0.92
NF1-223ENST00000584328 TRERF1Q96PN7 1200 aa9.31□□□□□ -0.92
NF1-223ENST00000584328 PARP3Q9Y6F1 533 aa9.31□□□□□ -0.92
NF1-223ENST00000584328 NCAPD3P42695 1498 aa9.3□□□□□ -0.92
NF1-223ENST00000584328 M0R2N6 131 aa9.3□□□□□ -0.92
NF1-223ENST00000584328 THBS1P07996 1170 aa9.3□□□□□ -0.92
NF1-223ENST00000584328 RFX1P22670 979 aa9.3□□□□□ -0.92
NF1-223ENST00000584328 PTK7Q13308 1070 aa9.3□□□□□ -0.92
NF1-223ENST00000584328 GAS6Q14393 721 aa9.3□□□□□ -0.92
NF1-223ENST00000584328 NBPF1Q3BBV0 1214 aa9.3□□□□□ -0.92
NF1-223ENST00000584328 TSEN2Q8NCE0 465 aaKnown RBP9.3□□□□□ -0.92
NF1-223ENST00000584328 ATAD2BQ9ULI0 1458 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 USP17L15C9J2P7 530 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 USP17L10C9JJH3 530 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 USP17L13C9JLJ4 530 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 USP17L12C9JPN9 530 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 USP17L11C9JVI0 530 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 USP17L21D6R901 530 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 USP17L18D6R9N7 530 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 USP17L22D6RA61 530 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 USP17L17D6RBQ6 530 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 USP17L19D6RCP7 530 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 USP17L20D6RJB6 530 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 ATP4AP20648 1035 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 SEC13P55735 322 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 USP17L24Q0WX57 530 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 LBRQ14739 615 aaKnown RBP9.29□□□□□ -0.92
NF1-223ENST00000584328 EFHC2Q5JST6 749 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 C1orf216Q8TAB5 229 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 STK17AQ9UEE5 414 aa9.29□□□□□ -0.92
NF1-223ENST00000584328 FAM196BA6NMK8 535 aa9.28□□□□□ -0.92
NF1-223ENST00000584328 TATP17735 454 aaPredicted RBP9.28□□□□□ -0.92
NF1-223ENST00000584328 DPYDQ12882 1025 aa9.28□□□□□ -0.92
NF1-223ENST00000584328 TEAD4Q15561 434 aa9.28□□□□□ -0.92
NF1-223ENST00000584328 C14orf37Q86TY3 774 aa9.28□□□□□ -0.92
NF1-223ENST00000584328 ZDHHC1Q8WTX9 485 aa9.28□□□□□ -0.92
NF1-223ENST00000584328 TSPAN10Q9H1Z9 355 aaPredicted RBP9.28□□□□□ -0.92
NF1-223ENST00000584328 CRISPLD1Q9H336 500 aa9.28□□□□□ -0.92
NF1-223ENST00000584328 NOS2P35228 1153 aa9.27□□□□□ -0.93
NF1-223ENST00000584328 CDCA8Q53HL2 280 aa9.27□□□□□ -0.93
NF1-223ENST00000584328 ARSJQ5FYB0 599 aaPredicted RBP9.27□□□□□ -0.93
NF1-223ENST00000584328 ANKMY2Q8IV38 441 aa9.27□□□□□ -0.93
NF1-223ENST00000584328 L3MBTL2Q969R5 705 aa9.27□□□□□ -0.93
NF1-223ENST00000584328 ZDHHC3Q9NYG2 299 aa9.27□□□□□ -0.93
NF1-223ENST00000584328 ZNF232Q9UNY5 417 aa9.27□□□□□ -0.93
NF1-223ENST00000584328 RSF1Q96T23 1441 aaPredicted RBP9.27□□□□□ -0.93
NF1-223ENST00000584328 ARID3CA6NKF2 412 aa9.26□□□□□ -0.93
NF1-223ENST00000584328 MBIPQ9NS73 344 aa9.26□□□□□ -0.93
NF1-223ENST00000584328 HMGXB3Q12766 1538 aa9.26□□□□□ -0.93
NF1-223ENST00000584328 SMARCA2P51531 1590 aa9.25□□□□□ -0.93
NF1-223ENST00000584328 SERTM1A2A2V5 107 aa9.25□□□□□ -0.93
NF1-223ENST00000584328 TXLNAP40222 546 aa9.25□□□□□ -0.93
NF1-223ENST00000584328 PSMA6P60900 246 aaKnown RBP9.25□□□□□ -0.93
NF1-223ENST00000584328 SRSF11Q05519 484 aaKnown RBP9.25□□□□□ -0.93
NF1-223ENST00000584328 UBAP2LQ14157 1087 aaKnown RBP9.25□□□□□ -0.93
NF1-223ENST00000584328 A0A1W2PNR3 127 aa9.24□□□□□ -0.93
NF1-223ENST00000584328 FAM181BA6NEQ2 426 aa9.24□□□□□ -0.93
NF1-223ENST00000584328 ADAMTS2O95450 1211 aa9.24□□□□□ -0.93
NF1-223ENST00000584328 SLURP2P0DP57 97 aa9.24□□□□□ -0.93
NF1-223ENST00000584328 SH3PXD2AQ5TCZ1 1133 aa9.24□□□□□ -0.93
NF1-223ENST00000584328 BICDL1Q6ZP65 573 aa9.24□□□□□ -0.93
NF1-223ENST00000584328 CCDC97Q96F63 343 aaPredicted RBP9.24□□□□□ -0.93
NF1-223ENST00000584328 HINFPQ9BQA5 517 aa9.24□□□□□ -0.93
NF1-223ENST00000584328 CFHR5Q9BXR6 569 aa9.24□□□□□ -0.93
NF1-223ENST00000584328 PHF24Q9UPV7 400 aa9.24□□□□□ -0.93
NF1-223ENST00000584328 CHMP3Q9Y3E7 222 aa9.24□□□□□ -0.93
NF1-223ENST00000584328 EML1O00423 815 aa9.23□□□□□ -0.93
NF1-223ENST00000584328 PPP1R12BO60237 982 aaPredicted RBP9.23□□□□□ -0.93
NF1-223ENST00000584328 MX2P20592 715 aa9.23□□□□□ -0.93
NF1-223ENST00000584328 NLRP8Q86W28 1048 aa9.23□□□□□ -0.93
NF1-223ENST00000584328 ARXQ96QS3 562 aa9.23□□□□□ -0.93
NF1-223ENST00000584328 ZIC5Q96T25 663 aa9.23□□□□□ -0.93
NF1-223ENST00000584328 C21orf2O43822 256 aa9.22□□□□□ -0.93
NF1-223ENST00000584328 LGR5O75473 907 aa9.22□□□□□ -0.93
NF1-223ENST00000584328 FIGNL1Q6PIW4 674 aa9.22□□□□□ -0.93
NF1-223ENST00000584328 SCG3Q8WXD2 468 aaKnown RBP9.22□□□□□ -0.93
NF1-223ENST00000584328 ZCCHC2Q9C0B9 1178 aaKnown RBP9.22□□□□□ -0.93
NF1-223ENST00000584328 SERPINA10Q9UK55 444 aa9.22□□□□□ -0.93
NF1-223ENST00000584328 GJA3Q9Y6H8 435 aa9.22□□□□□ -0.93
NF1-223ENST00000584328 IGF1RP08069 1367 aa9.22□□□□□ -0.93
NF1-223ENST00000584328 ATAD2Q6PL18 1390 aa9.22□□□□□ -0.93
NF1-223ENST00000584328 BNIP3LO60238 219 aa9.21□□□□□ -0.94
NF1-223ENST00000584328 ZNF385CQ66K41 422 aaPredicted RBP9.21□□□□□ -0.94
NF1-223ENST00000584328 FAM200AQ8TCP9 573 aa9.21□□□□□ -0.94
NF1-223ENST00000584328 WHAMMQ8TF30 809 aa9.21□□□□□ -0.94
NF1-223ENST00000584328 ABHD17AQ96GS6 310 aa9.21□□□□□ -0.94
NF1-223ENST00000584328 ATXN7L1Q9ULK2 861 aaPredicted RBP9.21□□□□□ -0.94
NF1-223ENST00000584328 NSFL1CQ9UNZ2 370 aaKnown RBP9.21□□□□□ -0.94
NF1-223ENST00000584328 HCN4Q9Y3Q4 1203 aa9.21□□□□□ -0.94
NF1-223ENST00000584328 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.2□□□□□ -0.94
NF1-223ENST00000584328 SVOPQ8N4V2 548 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms