RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ARHGEF1Q92888 912 aaKnown RBP15.44■□□□□ 0.06
CCDC47-206ENST00000584112 CLEC11AQ9Y240 323 aa15.44■□□□□ 0.06
CCDC47-206ENST00000584112 RTL1A6NKG5 1358 aa15.44■□□□□ 0.06
CCDC47-206ENST00000584112 AMPHP49418 695 aa15.43■□□□□ 0.06
CCDC47-206ENST00000584112 PIAS4Q8N2W9 510 aaPredicted RBP15.43■□□□□ 0.06
CCDC47-206ENST00000584112 CCER1Q8TC90 406 aaPredicted RBP15.43■□□□□ 0.06
CCDC47-206ENST00000584112 MAP3K19Q56UN5 1328 aa15.43■□□□□ 0.06
CCDC47-206ENST00000584112 COL6A3P12111 3177 aa15.42■□□□□ 0.06
CCDC47-206ENST00000584112 FYB1O15117 783 aa15.42■□□□□ 0.06
CCDC47-206ENST00000584112 HOXC9P31274 260 aa15.42■□□□□ 0.06
CCDC47-206ENST00000584112 ECE1P42892 770 aa15.42■□□□□ 0.06
CCDC47-206ENST00000584112 CNTROBQ8N137 903 aa15.42■□□□□ 0.06
CCDC47-206ENST00000584112 PIGBQ92521 554 aa15.42■□□□□ 0.06
CCDC47-206ENST00000584112 ADAMTSL1Q8N6G6 1762 aa15.41■□□□□ 0.06
CCDC47-206ENST00000584112 SCN4AP35499 1836 aa15.41■□□□□ 0.06
CCDC47-206ENST00000584112 GGNBP2Q9H3C7 697 aa15.41■□□□□ 0.06
CCDC47-206ENST00000584112 RTCBQ9Y3I0 505 aaKnown RBP15.41■□□□□ 0.06
CCDC47-206ENST00000584112 ATP6V1AP38606 617 aa15.4■□□□□ 0.06
CCDC47-206ENST00000584112 SMG6Q86US8 1419 aaKnown RBP15.4■□□□□ 0.06
CCDC47-206ENST00000584112 TRIOBPQ9H2D6 2365 aa15.4■□□□□ 0.06
CCDC47-206ENST00000584112 PITPNM2Q9BZ72 1349 aa15.4■□□□□ 0.06
CCDC47-206ENST00000584112 KIF24Q5T7B8 1368 aa15.38■□□□□ 0.05
CCDC47-206ENST00000584112 IQCA1LA6NCM1 817 aa15.38■□□□□ 0.05
CCDC47-206ENST00000584112 CA12O43570 354 aa15.38■□□□□ 0.05
CCDC47-206ENST00000584112 FBLN1P23142 703 aa15.38■□□□□ 0.05
CCDC47-206ENST00000584112 RFC4P35249 363 aa15.38■□□□□ 0.05
CCDC47-206ENST00000584112 FKBP8Q14318 412 aa15.38■□□□□ 0.05
CCDC47-206ENST00000584112 SRP68Q9UHB9 627 aaKnown RBP15.38■□□□□ 0.05
CCDC47-206ENST00000584112 MAP2K2P36507 400 aa15.37■□□□□ 0.05
CCDC47-206ENST00000584112 EIF4G2P78344 907 aaKnown RBP eCLIP15.37■□□□□ 0.05
CCDC47-206ENST00000584112 RRS1Q15050 365 aaKnown RBP15.37■□□□□ 0.05
CCDC47-206ENST00000584112 USHBP1Q8N6Y0 703 aa15.37■□□□□ 0.05
CCDC47-206ENST00000584112 DDX21Q9NR30 783 aaKnown RBP eCLIP15.37■□□□□ 0.05
CCDC47-206ENST00000584112 FLT4P35916 1363 aa15.36■□□□□ 0.05
CCDC47-206ENST00000584112 DLEC1Q9Y238 1755 aa15.36■□□□□ 0.05
CCDC47-206ENST00000584112 TTLL6Q8N841 843 aa15.36■□□□□ 0.05
CCDC47-206ENST00000584112 ASAP1Q9ULH1 1129 aa15.36■□□□□ 0.05
CCDC47-206ENST00000584112 FER1L6Q2WGJ9 1857 aa15.35■□□□□ 0.05
CCDC47-206ENST00000584112 CIAPIN1Q6FI81 312 aa15.35■□□□□ 0.05
CCDC47-206ENST00000584112 CARD14Q9BXL6 1004 aa15.35■□□□□ 0.05
CCDC47-206ENST00000584112 CGNL1Q0VF96 1302 aa15.35■□□□□ 0.05
CCDC47-206ENST00000584112 INSRP06213 1382 aa15.35■□□□□ 0.05
CCDC47-206ENST00000584112 L3MBTL3Q96JM7 780 aaPredicted RBP15.34■□□□□ 0.05
CCDC47-206ENST00000584112 MYH14Q7Z406 1995 aaKnown RBP15.33■□□□□ 0.05
CCDC47-206ENST00000584112 POLRMTO00411 1230 aaKnown RBP15.33■□□□□ 0.04
CCDC47-206ENST00000584112 CYP27B1O15528 508 aa15.33■□□□□ 0.04
CCDC47-206ENST00000584112 POLR3GLQ9BT43 218 aa15.33■□□□□ 0.04
CCDC47-206ENST00000584112 TRPM7Q96QT4 1865 aa15.33■□□□□ 0.04
CCDC47-206ENST00000584112 AFDNP55196 1824 aaKnown RBP15.32■□□□□ 0.04
CCDC47-206ENST00000584112 HSPA5P11021 654 aaKnown RBP15.32■□□□□ 0.04
CCDC47-206ENST00000584112 EPHX2P34913 555 aa15.32■□□□□ 0.04
CCDC47-206ENST00000584112 BRPF1P55201 1214 aaPredicted RBP15.32■□□□□ 0.04
CCDC47-206ENST00000584112 CST9Q5W186 159 aa15.32■□□□□ 0.04
CCDC47-206ENST00000584112 NBPF6Q5VWK0 638 aa15.31■□□□□ 0.04
CCDC47-206ENST00000584112 RAPGEF4Q8WZA2 1011 aa15.31■□□□□ 0.04
CCDC47-206ENST00000584112 NBPF4Q96M43 638 aa15.31■□□□□ 0.04
CCDC47-206ENST00000584112 ZIC5Q96T25 663 aa15.31■□□□□ 0.04
CCDC47-206ENST00000584112 HACL1Q9UJ83 578 aa15.31■□□□□ 0.04
CCDC47-206ENST00000584112 TLL2Q9Y6L7 1015 aa15.31■□□□□ 0.04
CCDC47-206ENST00000584112 PCDH11XQ9BZA7 1347 aa15.31■□□□□ 0.04
CCDC47-206ENST00000584112 PCDH11YQ9BZA8 1340 aa15.31■□□□□ 0.04
CCDC47-206ENST00000584112 TRAF5O00463 557 aa15.3■□□□□ 0.04
CCDC47-206ENST00000584112 C21orf2O43822 256 aa15.3■□□□□ 0.04
CCDC47-206ENST00000584112 HSP90AB2PQ58FF8 381 aa15.3■□□□□ 0.04
CCDC47-206ENST00000584112 SLC4A9Q96Q91 983 aa15.3■□□□□ 0.04
CCDC47-206ENST00000584112 HPS5Q9UPZ3 1129 aa15.3■□□□□ 0.04
CCDC47-206ENST00000584112 RPS6KA4O75676 772 aa15.29■□□□□ 0.04
CCDC47-206ENST00000584112 TATP17735 454 aaPredicted RBP15.29■□□□□ 0.04
CCDC47-206ENST00000584112 EMILIN1Q9Y6C2 1016 aa15.29■□□□□ 0.04
CCDC47-206ENST00000584112 CEP290O15078 2479 aa15.29■□□□□ 0.04
CCDC47-206ENST00000584112 ZNF541Q9H0D2 1346 aa15.28■□□□□ 0.04
CCDC47-206ENST00000584112 C2CD5Q86YS7 1000 aa15.28■□□□□ 0.04
CCDC47-206ENST00000584112 COLQQ9Y215 455 aaPredicted RBP15.28■□□□□ 0.04
CCDC47-206ENST00000584112 COL5A3P25940 1745 aaPredicted RBP15.28■□□□□ 0.04
CCDC47-206ENST00000584112 RNF123Q5XPI4 1314 aa15.27■□□□□ 0.04
CCDC47-206ENST00000584112 PPM1GO15355 546 aaPredicted RBP15.27■□□□□ 0.04
CCDC47-206ENST00000584112 TM4SF1P30408 202 aa15.27■□□□□ 0.04
CCDC47-206ENST00000584112 WASHC2AQ641Q2 1341 aa15.26■□□□□ 0.03
CCDC47-206ENST00000584112 ATG3Q9NT62 314 aa15.26■□□□□ 0.03
CCDC47-206ENST00000584112 NCAPD2Q15021 1401 aa15.26■□□□□ 0.03
CCDC47-206ENST00000584112 KDRP35968 1356 aa15.25■□□□□ 0.03
CCDC47-206ENST00000584112 USP42Q9H9J4 1324 aaKnown RBP15.25■□□□□ 0.03
CCDC47-206ENST00000584112 RC3H1Q5TC82 1133 aaKnown RBP15.25■□□□□ 0.03
CCDC47-206ENST00000584112 TAOK3Q9H2K8 898 aa15.25■□□□□ 0.03
CCDC47-206ENST00000584112 CARMIL3Q8ND23 1372 aa15.24■□□□□ 0.03
CCDC47-206ENST00000584112 CNTNAP4Q9C0A0 1308 aa15.24■□□□□ 0.03
CCDC47-206ENST00000584112 CTU1Q7Z7A3 348 aaKnown RBP15.24■□□□□ 0.03
CCDC47-206ENST00000584112 PNMA8AQ86V59 439 aaPredicted RBP15.24■□□□□ 0.03
CCDC47-206ENST00000584112 PANK3Q9H999 370 aa15.24■□□□□ 0.03
CCDC47-206ENST00000584112 TMOD3Q9NYL9 352 aa15.24■□□□□ 0.03
CCDC47-206ENST00000584112 SAPCD2Q86UD0 394 aa15.23■□□□□ 0.03
CCDC47-206ENST00000584112 RBM42Q9BTD8 480 aaKnown RBP15.23■□□□□ 0.03
CCDC47-206ENST00000584112 POLKQ9UBT6 870 aa15.23■□□□□ 0.03
CCDC47-206ENST00000584112 LTBP3Q9NS15 1303 aa15.22■□□□□ 0.03
CCDC47-206ENST00000584112 SCN11AQ9UI33 1791 aa15.21■□□□□ 0.03
CCDC47-206ENST00000584112 CACNA1SQ13698 1873 aa15.21■□□□□ 0.03
CCDC47-206ENST00000584112 NRXN2Q9P2S2 1712 aa15.21■□□□□ 0.03
CCDC47-206ENST00000584112 H0YIN7 160 aa15.21■□□□□ 0.03
CCDC47-206ENST00000584112 ZNF622Q969S3 477 aaKnown RBP eCLIP15.21■□□□□ 0.032e-12■■■□□ 16.7
CCDC47-206ENST00000584112 TNNT2P45379 298 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms