RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 IFT57Q9NWB7 429 aa10.83□□□□□ -0.68
ERBB2-216ENST00000584014 NUP188Q5SRE5 1749 aa10.83□□□□□ -0.68
ERBB2-216ENST00000584014 STARD3NLO95772 234 aa10.82□□□□□ -0.68
ERBB2-216ENST00000584014 GOLGA2Q08379 1002 aa10.82□□□□□ -0.68
ERBB2-216ENST00000584014 ZNF827Q17R98 1081 aa10.82□□□□□ -0.68
ERBB2-216ENST00000584014 NPM2Q86SE8 214 aaKnown RBP10.82□□□□□ -0.68
ERBB2-216ENST00000584014 ANO8Q9HCE9 1232 aaPredicted RBP10.82□□□□□ -0.68
ERBB2-216ENST00000584014 USP16Q9Y5T5 823 aa10.82□□□□□ -0.68
ERBB2-216ENST00000584014 PAPPAQ13219 1627 aa10.82□□□□□ -0.68
ERBB2-216ENST00000584014 C5P01031 1676 aa10.82□□□□□ -0.68
ERBB2-216ENST00000584014 RREB1Q92766 1687 aa10.82□□□□□ -0.68
ERBB2-216ENST00000584014 RGPD3A6NKT7 1758 aaPredicted RBP10.81□□□□□ -0.68
ERBB2-216ENST00000584014 KDM3BQ7LBC6 1761 aa10.81□□□□□ -0.68
ERBB2-216ENST00000584014 RGPD4Q7Z3J3 1758 aa10.81□□□□□ -0.68
ERBB2-216ENST00000584014 KCPQ6ZWJ8 1503 aa10.81□□□□□ -0.68
ERBB2-216ENST00000584014 CRKLP46109 303 aaKnown RBP10.81□□□□□ -0.68
ERBB2-216ENST00000584014 PLCB2Q00722 1185 aa10.81□□□□□ -0.68
ERBB2-216ENST00000584014 SLC15A2Q16348 729 aa10.81□□□□□ -0.68
ERBB2-216ENST00000584014 CDCA7LQ96GN5 454 aa10.81□□□□□ -0.68
ERBB2-216ENST00000584014 TEX13AQ9BXU3 409 aaPredicted RBP10.81□□□□□ -0.68
ERBB2-216ENST00000584014 MYH16Q9H6N6 1097 aa10.81□□□□□ -0.68
ERBB2-216ENST00000584014 SPINK5Q9NQ38 1064 aaPredicted RBP10.81□□□□□ -0.68
ERBB2-216ENST00000584014 TAF1LQ8IZX4 1826 aa10.81□□□□□ -0.68
ERBB2-216ENST00000584014 UBR2Q8IWV8 1755 aa10.8□□□□□ -0.68
ERBB2-216ENST00000584014 TCERG1O14776 1098 aaKnown RBP10.8□□□□□ -0.68
ERBB2-216ENST00000584014 GIGYF1O75420 1035 aaPredicted RBP10.8□□□□□ -0.68
ERBB2-216ENST00000584014 A1BGP04217 495 aa10.8□□□□□ -0.68
ERBB2-216ENST00000584014 CYP19A1P11511 503 aaPredicted RBP10.8□□□□□ -0.68
ERBB2-216ENST00000584014 MYL6BP14649 208 aa10.8□□□□□ -0.68
ERBB2-216ENST00000584014 DUSP27Q5VZP5 1158 aa10.8□□□□□ -0.68
ERBB2-216ENST00000584014 C8orf58Q8NAV2 365 aa10.8□□□□□ -0.68
ERBB2-216ENST00000584014 CCDC87Q9NVE4 849 aa10.8□□□□□ -0.68
ERBB2-216ENST00000584014 BABAM1Q9NWV8 329 aa10.8□□□□□ -0.68
ERBB2-216ENST00000584014 RTCBQ9Y3I0 505 aaKnown RBP10.8□□□□□ -0.68
ERBB2-216ENST00000584014 C4BP0C0L5 1744 aa10.8□□□□□ -0.68
ERBB2-216ENST00000584014 TJP1Q07157 1748 aa10.79□□□□□ -0.68
ERBB2-216ENST00000584014 ZNF853P0CG23 659 aa10.79□□□□□ -0.68
ERBB2-216ENST00000584014 HMGB2P26583 209 aaKnown RBP10.79□□□□□ -0.68
ERBB2-216ENST00000584014 EXOSC9Q06265 439 aaKnown RBP10.79□□□□□ -0.68
ERBB2-216ENST00000584014 VSIG10Q8N0Z9 540 aa10.79□□□□□ -0.68
ERBB2-216ENST00000584014 IL16Q14005 1332 aa10.79□□□□□ -0.68
ERBB2-216ENST00000584014 FANCIQ9NVI1 1328 aa10.79□□□□□ -0.68
ERBB2-216ENST00000584014 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.78□□□□□ -0.68
ERBB2-216ENST00000584014 ANXA1P04083 346 aa10.78□□□□□ -0.68
ERBB2-216ENST00000584014 RFC4P35249 363 aa10.78□□□□□ -0.68
ERBB2-216ENST00000584014 TRAPPC3LQ5T215 181 aa10.78□□□□□ -0.68
ERBB2-216ENST00000584014 HDGFL1Q5TGJ6 251 aa10.78□□□□□ -0.68
ERBB2-216ENST00000584014 INTS5Q6P9B9 1019 aaKnown RBP10.78□□□□□ -0.68
ERBB2-216ENST00000584014 TSPYL6Q8N831 410 aa10.78□□□□□ -0.68
ERBB2-216ENST00000584014 AKT1S1Q96B36 256 aa10.78□□□□□ -0.68
ERBB2-216ENST00000584014 ZBTB1Q9Y2K1 713 aa10.78□□□□□ -0.68
ERBB2-216ENST00000584014 E9PSI1 815 aa10.77□□□□□ -0.69
ERBB2-216ENST00000584014 RPS6KA4O75676 772 aa10.77□□□□□ -0.69
ERBB2-216ENST00000584014 ZBTB7AO95365 584 aa10.77□□□□□ -0.69
ERBB2-216ENST00000584014 SLC4A2P04920 1241 aa10.77□□□□□ -0.69
ERBB2-216ENST00000584014 AIMP1Q12904 312 aaKnown RBP10.77□□□□□ -0.69
ERBB2-216ENST00000584014 TWISTNBQ3B726 338 aaPredicted RBP10.77□□□□□ -0.69
ERBB2-216ENST00000584014 TPRNQ4KMQ1 711 aa10.77□□□□□ -0.69
ERBB2-216ENST00000584014 PDGFDQ9GZP0 370 aaPredicted RBP10.77□□□□□ -0.69
ERBB2-216ENST00000584014 ATF5Q9Y2D1 282 aaPredicted RBP10.77□□□□□ -0.69
ERBB2-216ENST00000584014 COL5A3P25940 1745 aaPredicted RBP10.77□□□□□ -0.69
ERBB2-216ENST00000584014 CNTNAP4Q9C0A0 1308 aa10.77□□□□□ -0.69
ERBB2-216ENST00000584014 SLFN5Q08AF3 891 aa10.76□□□□□ -0.69
ERBB2-216ENST00000584014 RC3H1Q5TC82 1133 aaKnown RBP10.76□□□□□ -0.69
ERBB2-216ENST00000584014 MSL1Q68DK7 614 aa10.76□□□□□ -0.69
ERBB2-216ENST00000584014 AMIGO3Q86WK7 504 aa10.76□□□□□ -0.69
ERBB2-216ENST00000584014 COL23A1Q86Y22 540 aaPredicted RBP10.76□□□□□ -0.69
ERBB2-216ENST00000584014 TBC1D2BQ9UPU7 963 aa10.76□□□□□ -0.69
ERBB2-216ENST00000584014 ZNF521Q96K83 1311 aa10.76□□□□□ -0.69
ERBB2-216ENST00000584014 MYH14Q7Z406 1995 aaKnown RBP10.76□□□□□ -0.69
ERBB2-216ENST00000584014 ZPR1O75312 459 aa10.75□□□□□ -0.69
ERBB2-216ENST00000584014 FLAD1Q8NFF5 587 aa10.75□□□□□ -0.69
ERBB2-216ENST00000584014 ARHGEF1Q92888 912 aaKnown RBP10.75□□□□□ -0.69
ERBB2-216ENST00000584014 CHPF2Q9P2E5 772 aa10.75□□□□□ -0.69
ERBB2-216ENST00000584014 PNPLA7Q6ZV29 1317 aa10.75□□□□□ -0.69
ERBB2-216ENST00000584014 LAMB4A4D0S4 1761 aa10.75□□□□□ -0.69
ERBB2-216ENST00000584014 TUBGCP6Q96RT7 1819 aa10.74□□□□□ -0.69
ERBB2-216ENST00000584014 ZNF831Q5JPB2 1677 aa10.74□□□□□ -0.69
ERBB2-216ENST00000584014 NBPF26B4DH59 902 aa10.74□□□□□ -0.69
ERBB2-216ENST00000584014 SSFA2P28290 1259 aa10.74□□□□□ -0.69
ERBB2-216ENST00000584014 PROSER3Q2NL68 480 aa10.74□□□□□ -0.69
ERBB2-216ENST00000584014 NBPF10Q6P3W6 841 aaKnown RBP10.74□□□□□ -0.69
ERBB2-216ENST00000584014 NBPF15Q8N660 670 aa10.74□□□□□ -0.69
ERBB2-216ENST00000584014 STK31Q9BXU1 1019 aa10.74□□□□□ -0.69
ERBB2-216ENST00000584014 SRP68Q9UHB9 627 aaKnown RBP10.74□□□□□ -0.69
ERBB2-216ENST00000584014 ZBED9Q6R2W3 1325 aa10.74□□□□□ -0.69
ERBB2-216ENST00000584014 UBR3Q6ZT12 1888 aa10.74□□□□□ -0.69
ERBB2-216ENST00000584014 IL6STP40189 918 aaPredicted RBP10.73□□□□□ -0.69
ERBB2-216ENST00000584014 CCDC30Q5VVM6 783 aa10.73□□□□□ -0.69
ERBB2-216ENST00000584014 BICDL1Q6ZP65 573 aa10.73□□□□□ -0.69
ERBB2-216ENST00000584014 DZIP3Q86Y13 1208 aaKnown RBP10.73□□□□□ -0.69
ERBB2-216ENST00000584014 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
ERBB2-216ENST00000584014 SOS1Q07889 1333 aaPredicted RBP10.73□□□□□ -0.69
ERBB2-216ENST00000584014 COL15A1P39059 1388 aa10.73□□□□□ -0.69
ERBB2-216ENST00000584014 A0A087WZG4 1122 aa10.72□□□□□ -0.69
ERBB2-216ENST00000584014 CAPN15O75808 1086 aa10.72□□□□□ -0.69
ERBB2-216ENST00000584014 USPL1Q5W0Q7 1092 aa10.72□□□□□ -0.69
ERBB2-216ENST00000584014 KIF6Q6ZMV9 814 aa10.72□□□□□ -0.69
ERBB2-216ENST00000584014 COPS6Q7L5N1 327 aa10.72□□□□□ -0.69
ERBB2-216ENST00000584014 XAGE3Q8WTP9 111 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms