RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	CABP4	P57796	275 aa		12.03	□□□□□ -0.48
NUP85-223	ENST00000583877	FSTL1	Q12841	308 aa		12.03	□□□□□ -0.48
NUP85-223	ENST00000583877	AMOT	Q4VCS5	1084 aa		12.03	□□□□□ -0.48
NUP85-223	ENST00000583877	KDM2B	Q8NHM5	1336 aa		12.03	□□□□□ -0.48
NUP85-223	ENST00000583877	DALRD3	Q5D0E6	543 aa	Known RBP	12.02	□□□□□ -0.49
NUP85-223	ENST00000583877	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.02	□□□□□ -0.49
NUP85-223	ENST00000583877	USP42	Q9H9J4	1324 aa	Known RBP	12.02	□□□□□ -0.49
NUP85-223	ENST00000583877	PTCD1	O75127	700 aa	Known RBP	12.01	□□□□□ -0.49
NUP85-223	ENST00000583877	CRKL	P46109	303 aa	Known RBP	12.01	□□□□□ -0.49
NUP85-223	ENST00000583877	MTHFS	P49914	203 aa		12.01	□□□□□ -0.49
NUP85-223	ENST00000583877	KLRG1	Q96E93	195 aa		12.01	□□□□□ -0.49
NUP85-223	ENST00000583877	UBR2	Q8IWV8	1755 aa		12	□□□□□ -0.49
NUP85-223	ENST00000583877	CACNA1S	Q13698	1873 aa		12	□□□□□ -0.49
NUP85-223	ENST00000583877	DDR1	Q08345	913 aa		12	□□□□□ -0.49
NUP85-223	ENST00000583877	C1orf141	Q5JVX7	400 aa		12	□□□□□ -0.49
NUP85-223	ENST00000583877	JMY	Q8N9B5	988 aa		12	□□□□□ -0.49
NUP85-223	ENST00000583877	NFATC2IP	Q8NCF5	419 aa		12	□□□□□ -0.49
NUP85-223	ENST00000583877	RNF181	Q9P0P0	153 aa		12	□□□□□ -0.49
NUP85-223	ENST00000583877	SRP68	Q9UHB9	627 aa	Known RBP	12	□□□□□ -0.49
NUP85-223	ENST00000583877	FER1L6	Q2WGJ9	1857 aa		12	□□□□□ -0.49
NUP85-223	ENST00000583877	POLR3GL	Q9BT43	218 aa		11.99	□□□□□ -0.49
NUP85-223	ENST00000583877	TIMELESS	Q9UNS1	1208 aa		11.99	□□□□□ -0.49
NUP85-223	ENST00000583877	ANKRD31	Q8N7Z5	1873 aa		11.99	□□□□□ -0.49
NUP85-223	ENST00000583877	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.98	□□□□□ -0.49
NUP85-223	ENST00000583877	POLRMT	O00411	1230 aa	Known RBP	11.98	□□□□□ -0.49
NUP85-223	ENST00000583877	TM4SF1	P30408	202 aa		11.98	□□□□□ -0.49
NUP85-223	ENST00000583877	CHRNA5	P30532	468 aa		11.98	□□□□□ -0.49
NUP85-223	ENST00000583877	HTRA3	P83110	453 aa		11.98	□□□□□ -0.49
NUP85-223	ENST00000583877	INTS5	Q6P9B9	1019 aa	Known RBP	11.98	□□□□□ -0.49
NUP85-223	ENST00000583877	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.98	□□□□□ -0.49
NUP85-223	ENST00000583877	RRAGC	Q9HB90	399 aa		11.98	□□□□□ -0.49
NUP85-223	ENST00000583877	ZPR1	O75312	459 aa		11.97	□□□□□ -0.49
NUP85-223	ENST00000583877	AEBP1	Q8IUX7	1158 aa		11.97	□□□□□ -0.49
NUP85-223	ENST00000583877	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.96	□□□□□ -0.49
NUP85-223	ENST00000583877	SMC1B	Q8NDV3	1235 aa		11.96	□□□□□ -0.49
NUP85-223	ENST00000583877	MRC1	P22897	1456 aa		11.95	□□□□□ -0.5
NUP85-223	ENST00000583877	ARFGEF2	Q9Y6D5	1785 aa		11.95	□□□□□ -0.5
NUP85-223	ENST00000583877	SOS1	Q07889	1333 aa	Predicted RBP	11.95	□□□□□ -0.5
NUP85-223	ENST00000583877	USPL1	Q5W0Q7	1092 aa		11.95	□□□□□ -0.5
NUP85-223	ENST00000583877	SULT6B1	Q6IMI4	303 aa		11.95	□□□□□ -0.5
NUP85-223	ENST00000583877	PANK3	Q9H999	370 aa		11.95	□□□□□ -0.5
NUP85-223	ENST00000583877	SIPA1L3	O60292	1781 aa	Predicted RBP	11.95	□□□□□ -0.5
NUP85-223	ENST00000583877	LMNB1	P20700	586 aa		11.94	□□□□□ -0.5
NUP85-223	ENST00000583877	AKAP4	Q5JQC9	854 aa		11.94	□□□□□ -0.5
NUP85-223	ENST00000583877	DNAJC10	Q8IXB1	793 aa		11.94	□□□□□ -0.5
NUP85-223	ENST00000583877	NARF	Q9UHQ1	456 aa		11.94	□□□□□ -0.5
NUP85-223	ENST00000583877	COL11A2	P13942	1736 aa	Predicted RBP	11.94	□□□□□ -0.5
NUP85-223	ENST00000583877	COL15A1	P39059	1388 aa		11.93	□□□□□ -0.5
NUP85-223	ENST00000583877	CYP19A1	P11511	503 aa	Predicted RBP	11.93	□□□□□ -0.5
NUP85-223	ENST00000583877	RASSF7	Q02833	373 aa		11.93	□□□□□ -0.5
NUP85-223	ENST00000583877	MORC1	Q86VD1	984 aa		11.93	□□□□□ -0.5
NUP85-223	ENST00000583877	SLC52A2	Q9HAB3	445 aa		11.93	□□□□□ -0.5
NUP85-223	ENST00000583877	SCN7A	Q01118	1682 aa		11.93	□□□□□ -0.5
NUP85-223	ENST00000583877	GLTPD2	A6NH11	291 aa		11.92	□□□□□ -0.5
NUP85-223	ENST00000583877	VEGFA	P15692	232 aa	Predicted RBP	11.92	□□□□□ -0.5
NUP85-223	ENST00000583877	IL13	P35225	146 aa		11.92	□□□□□ -0.5
NUP85-223	ENST00000583877	NFIX	Q14938	502 aa		11.92	□□□□□ -0.5
NUP85-223	ENST00000583877	SCN4A	P35499	1836 aa		11.91	□□□□□ -0.5
NUP85-223	ENST00000583877	SLX4	Q8IY92	1834 aa		11.91	□□□□□ -0.5
NUP85-223	ENST00000583877	PRELP	P51888	382 aa		11.91	□□□□□ -0.5
NUP85-223	ENST00000583877	TNS4	Q8IZW8	715 aa		11.91	□□□□□ -0.5
NUP85-223	ENST00000583877	TTLL6	Q8N841	843 aa		11.91	□□□□□ -0.5
NUP85-223	ENST00000583877	LGR6	Q9HBX8	967 aa		11.91	□□□□□ -0.5
NUP85-223	ENST00000583877	BCOR	Q6W2J9	1755 aa		11.9	□□□□□ -0.5
NUP85-223	ENST00000583877	SERPINB2	P05120	415 aa		11.9	□□□□□ -0.5
NUP85-223	ENST00000583877	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
NUP85-223	ENST00000583877	SLC39A6	Q13433	755 aa		11.9	□□□□□ -0.5
NUP85-223	ENST00000583877	VSIG10	Q8N0Z9	540 aa		11.9	□□□□□ -0.5
NUP85-223	ENST00000583877	BCL2L12	Q9HB09	334 aa		11.9	□□□□□ -0.5
NUP85-223	ENST00000583877	ZBTB1	Q9Y2K1	713 aa		11.9	□□□□□ -0.5
NUP85-223	ENST00000583877	CLSPN	Q9HAW4	1339 aa		11.89	□□□□□ -0.51
NUP85-223	ENST00000583877	SPDYE2B	A6NHP3	402 aa		11.89	□□□□□ -0.51
NUP85-223	ENST00000583877		H0YIN7	160 aa		11.89	□□□□□ -0.51
NUP85-223	ENST00000583877	RNMT	O43148	476 aa	Known RBP	11.89	□□□□□ -0.51
NUP85-223	ENST00000583877	SPDYE6	P0CI01	402 aa		11.89	□□□□□ -0.51
NUP85-223	ENST00000583877	TRIM26	Q12899	539 aa	Predicted RBP	11.89	□□□□□ -0.51
NUP85-223	ENST00000583877	SPDYE2	Q495Y8	402 aa		11.89	□□□□□ -0.51
NUP85-223	ENST00000583877	C2CD5	Q86YS7	1000 aa		11.89	□□□□□ -0.51
NUP85-223	ENST00000583877	NFKBIE	O00221	500 aa		11.88	□□□□□ -0.51
NUP85-223	ENST00000583877	HSPA5	P11021	654 aa	Known RBP	11.88	□□□□□ -0.51
NUP85-223	ENST00000583877	PDZRN3	Q9UPQ7	1066 aa		11.88	□□□□□ -0.51
NUP85-223	ENST00000583877	KNSTRN	Q9Y448	316 aa		11.88	□□□□□ -0.51
NUP85-223	ENST00000583877	CARMIL3	Q8ND23	1372 aa		11.88	□□□□□ -0.51
NUP85-223	ENST00000583877	HSPA1A	P0DMV8	641 aa	Known RBP	11.87	□□□□□ -0.51
NUP85-223	ENST00000583877	HSPA1B	P0DMV9	641 aa	Known RBP	11.87	□□□□□ -0.51
NUP85-223	ENST00000583877		A0A087WZG4	1122 aa		11.86	□□□□□ -0.51
NUP85-223	ENST00000583877	POTEC	B2RU33	542 aa		11.86	□□□□□ -0.51
NUP85-223	ENST00000583877	STARD3NL	O95772	234 aa		11.86	□□□□□ -0.51
NUP85-223	ENST00000583877	CANX	P27824	592 aa	Known RBP	11.86	□□□□□ -0.51
NUP85-223	ENST00000583877	EIF5	P55010	431 aa	Known RBP	11.86	□□□□□ -0.51
NUP85-223	ENST00000583877	DPY19L2	Q6NUT2	758 aa		11.86	□□□□□ -0.51
NUP85-223	ENST00000583877	HMOX1	P09601	288 aa		11.85	□□□□□ -0.51
NUP85-223	ENST00000583877	PDE6B	P35913	854 aa		11.85	□□□□□ -0.51
NUP85-223	ENST00000583877	MTHFSD	Q2M296	383 aa	Known RBP	11.85	□□□□□ -0.51
NUP85-223	ENST00000583877	BRIP1	Q9BX63	1249 aa		11.85	□□□□□ -0.51
NUP85-223	ENST00000583877	SSUH2	Q9Y2M2	353 aa		11.85	□□□□□ -0.51
NUP85-223	ENST00000583877	ERFE	Q4G0M1	354 aa		11.84	□□□□□ -0.51
NUP85-223	ENST00000583877	BICDL1	Q6ZP65	573 aa		11.84	□□□□□ -0.51
NUP85-223	ENST00000583877	TTC5	Q8N0Z6	440 aa		11.84	□□□□□ -0.51
NUP85-223	ENST00000583877	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms