RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 MBD3O95983 291 aa13.09□□□□□ -0.31
MSI2-217ENST00000583705 SLC5A1P13866 664 aa13.09□□□□□ -0.31
MSI2-217ENST00000583705 GJC1P36383 396 aa13.09□□□□□ -0.31
MSI2-217ENST00000583705 TMCO3Q6UWJ1 677 aa13.09□□□□□ -0.31
MSI2-217ENST00000583705 MPHOSPH6Q99547 160 aaKnown RBP13.09□□□□□ -0.31
MSI2-217ENST00000583705 MCM2P49736 904 aa13.09□□□□□ -0.31
MSI2-217ENST00000583705 IFIT5Q13325 482 aaKnown RBP13.09□□□□□ -0.31
MSI2-217ENST00000583705 AFAP1Q8N556 730 aa13.09□□□□□ -0.31
MSI2-217ENST00000583705 SLC12A7Q9Y666 1083 aa13.09□□□□□ -0.31
MSI2-217ENST00000583705 CASQ1P31415 396 aa13.09□□□□□ -0.31
MSI2-217ENST00000583705 IQCA1Q86XH1 822 aa13.08□□□□□ -0.31
MSI2-217ENST00000583705 SLC12A5Q9H2X9 1139 aa13.08□□□□□ -0.31
MSI2-217ENST00000583705 CCT2P78371 535 aaKnown RBP13.08□□□□□ -0.32
MSI2-217ENST00000583705 PICALMQ13492 652 aa13.08□□□□□ -0.32
MSI2-217ENST00000583705 PAIP2Q9BPZ3 127 aaKnown RBP13.08□□□□□ -0.32
MSI2-217ENST00000583705 NUP62CLQ9H1M0 184 aa13.08□□□□□ -0.32
MSI2-217ENST00000583705 VEZTQ9HBM0 779 aa13.08□□□□□ -0.32
MSI2-217ENST00000583705 SPECC1Q5M775 1068 aa13.08□□□□□ -0.32
MSI2-217ENST00000583705 CCDC83Q8IWF9 413 aa13.08□□□□□ -0.32
MSI2-217ENST00000583705 HLTFQ14527 1009 aaKnown RBP eCLIP13.08□□□□□ -0.32
MSI2-217ENST00000583705 CRACR2AQ9BSW2 395 aa13.08□□□□□ -0.32
MSI2-217ENST00000583705 SMARCA5O60264 1052 aaPredicted RBP13.08□□□□□ -0.32
MSI2-217ENST00000583705 PHACTR2O75167 634 aa13.08□□□□□ -0.32
MSI2-217ENST00000583705 IDEP14735 1019 aa13.08□□□□□ -0.32
MSI2-217ENST00000583705 RNF187Q5TA31 235 aaPredicted RBP13.08□□□□□ -0.32
MSI2-217ENST00000583705 PANK2Q9BZ23 570 aa13.08□□□□□ -0.32
MSI2-217ENST00000583705 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
MSI2-217ENST00000583705 SRRTQ9BXP5 876 aaKnown RBP13.08□□□□□ -0.32
MSI2-217ENST00000583705 MAP3K12Q12852 859 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 JARID2Q92833 1246 aaPredicted RBP13.07□□□□□ -0.32
MSI2-217ENST00000583705 EXOC6BQ9Y2D4 811 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 AKAP2Q9Y2D5 859 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 ATF7IPQ6VMQ6 1270 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 CCDC194A0A1B0GVG4 234 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 ST5P78524 1137 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 SP4Q02446 784 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 SSRP1Q08945 709 aaKnown RBP13.07□□□□□ -0.32
MSI2-217ENST00000583705 WDR33Q9C0J8 1336 aaKnown RBP13.07□□□□□ -0.32
MSI2-217ENST00000583705 RRBP1Q9P2E9 1410 aaKnown RBP13.07□□□□□ -0.32
MSI2-217ENST00000583705 GNAT3A8MTJ3 354 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 SMTNL1A8MU46 457 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 PSMC4P43686 418 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 RBM25P49756 843 aaKnown RBP13.07□□□□□ -0.32
MSI2-217ENST00000583705 BIRC2Q13490 618 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 CCDC8Q9H0W5 538 aaPredicted RBP13.07□□□□□ -0.32
MSI2-217ENST00000583705 RAPGEF2Q9Y4G8 1499 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 IFIT3O14879 490 aaKnown RBP13.07□□□□□ -0.32
MSI2-217ENST00000583705 MRE11P49959 708 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 SLF2Q8IX21 1173 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 FERMT1Q9BQL6 677 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 NDC80O14777 642 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 DDX46Q7L014 1031 aaKnown RBP13.07□□□□□ -0.32
MSI2-217ENST00000583705 RAB34Q9BZG1 259 aa13.07□□□□□ -0.32
MSI2-217ENST00000583705 GCOM1H8Y6P7 765 aaPredicted RBP13.06□□□□□ -0.32
MSI2-217ENST00000583705 MYZAPP0CAP1 466 aa13.06□□□□□ -0.32
MSI2-217ENST00000583705 ZBTB21Q9ULJ3 1066 aa13.06□□□□□ -0.32
MSI2-217ENST00000583705 UQCRHLA0A096LP55 91 aa13.06□□□□□ -0.32
MSI2-217ENST00000583705 MTIF2P46199 727 aaKnown RBP13.06□□□□□ -0.32
MSI2-217ENST00000583705 CCDC40Q4G0X9 1142 aa13.06□□□□□ -0.32
MSI2-217ENST00000583705 MCM10Q7L590 875 aa13.06□□□□□ -0.32
MSI2-217ENST00000583705 ANKRD18BA2A2Z9 1011 aa13.06□□□□□ -0.32
MSI2-217ENST00000583705 CCDC174Q6PII3 467 aa13.06□□□□□ -0.32
MSI2-217ENST00000583705 ZBTB3Q9H5J0 574 aa13.06□□□□□ -0.32
MSI2-217ENST00000583705 CCDC88BA6NC98 1476 aa13.06□□□□□ -0.32
MSI2-217ENST00000583705 TSPY2A6NKD2 308 aa13.06□□□□□ -0.32
MSI2-217ENST00000583705 TMEM110-MUSTN1A8MSY1 372 aa13.06□□□□□ -0.32
MSI2-217ENST00000583705 ZNF213O14771 459 aa13.06□□□□□ -0.32
MSI2-217ENST00000583705 CATIPQ7Z7H3 387 aa13.06□□□□□ -0.32
MSI2-217ENST00000583705 TIGD1Q96MW7 591 aa13.05□□□□□ -0.32
MSI2-217ENST00000583705 RTEL1-TNFRSF6BF6WH68 1400 aa13.05□□□□□ -0.32
MSI2-217ENST00000583705 HLA-DOAP06340 250 aa13.05□□□□□ -0.32
MSI2-217ENST00000583705 CETN1Q12798 172 aa13.05□□□□□ -0.32
MSI2-217ENST00000583705 U3KPZ7 1027 aaPredicted RBP13.05□□□□□ -0.32
MSI2-217ENST00000583705 EXOC5O00471 708 aa13.05□□□□□ -0.32
MSI2-217ENST00000583705 ZBTB9Q96C00 473 aa13.05□□□□□ -0.32
MSI2-217ENST00000583705 GCC1Q96CN9 775 aa13.05□□□□□ -0.32
MSI2-217ENST00000583705 IKBKGQ9Y6K9 419 aa13.04□□□□□ -0.32
MSI2-217ENST00000583705 FSD2A1L4K1 749 aa13.04□□□□□ -0.32
MSI2-217ENST00000583705 C11orf95C9JLR9 678 aaPredicted RBP13.04□□□□□ -0.32
MSI2-217ENST00000583705 BMS1Q14692 1282 aaKnown RBP13.04□□□□□ -0.32
MSI2-217ENST00000583705 PRPF40BQ6NWY9 871 aaKnown RBP13.04□□□□□ -0.32
MSI2-217ENST00000583705 CALML4Q96GE6 196 aa13.04□□□□□ -0.32
MSI2-217ENST00000583705 ZFP91Q96JP5 570 aaPredicted RBP13.04□□□□□ -0.32
MSI2-217ENST00000583705 C8orf37Q96NL8 207 aa13.04□□□□□ -0.32
MSI2-217ENST00000583705 GJA3Q9Y6H8 435 aa13.04□□□□□ -0.32
MSI2-217ENST00000583705 ACTN2P35609 894 aa13.04□□□□□ -0.32
MSI2-217ENST00000583705 KIF4BQ2VIQ3 1234 aa13.04□□□□□ -0.32
MSI2-217ENST00000583705 IQSEC3Q9UPP2 1182 aaPredicted RBP13.04□□□□□ -0.32
MSI2-217ENST00000583705 KAT14Q9H8E8 782 aa13.03□□□□□ -0.32
MSI2-217ENST00000583705 CCDC63Q8NA47 563 aa13.03□□□□□ -0.32
MSI2-217ENST00000583705 TCHPQ9BT92 498 aa13.03□□□□□ -0.32
MSI2-217ENST00000583705 A0A087WZG4 1122 aa13.03□□□□□ -0.32
MSI2-217ENST00000583705 FGFR1OPO95684 399 aaKnown RBP13.03□□□□□ -0.32
MSI2-217ENST00000583705 C8orf76Q96K31 380 aa13.03□□□□□ -0.32
MSI2-217ENST00000583705 ODF2LQ9ULJ1 636 aa13.03□□□□□ -0.32
MSI2-217ENST00000583705 HAND2P61296 217 aa13.03□□□□□ -0.32
MSI2-217ENST00000583705 GOLGA8AA7E2F4 631 aa13.03□□□□□ -0.32
MSI2-217ENST00000583705 GOLGA8BA8MQT2 603 aa13.03□□□□□ -0.32
MSI2-217ENST00000583705 SNRKQ9NRH2 765 aa13.03□□□□□ -0.32
MSI2-217ENST00000583705 BIN1O00499 593 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms