RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 INTS5Q6P9B9 1019 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-229ENST00000583697 ZBTB1Q9Y2K1 713 aa11.7□□□□□ -0.54
CDK5RAP3-229ENST00000583697 BCORQ6W2J9 1755 aa11.69□□□□□ -0.54
CDK5RAP3-229ENST00000583697 GNAT3A8MTJ3 354 aa11.69□□□□□ -0.54
CDK5RAP3-229ENST00000583697 CYP19A1P11511 503 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-229ENST00000583697 DDR1Q08345 913 aa11.69□□□□□ -0.54
CDK5RAP3-229ENST00000583697 USPL1Q5W0Q7 1092 aa11.69□□□□□ -0.54
CDK5RAP3-229ENST00000583697 VSIG10Q8N0Z9 540 aa11.69□□□□□ -0.54
CDK5RAP3-229ENST00000583697 PIM2Q9P1W9 311 aa11.69□□□□□ -0.54
CDK5RAP3-229ENST00000583697 TIAM2Q8IVF5 1701 aa11.69□□□□□ -0.54
CDK5RAP3-229ENST00000583697 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-229ENST00000583697 POLRMTO00411 1230 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-229ENST00000583697 ARHGAP27Q6ZUM4 889 aa11.68□□□□□ -0.54
CDK5RAP3-229ENST00000583697 HEG1Q9ULI3 1381 aa11.67□□□□□ -0.54
CDK5RAP3-229ENST00000583697 LAMB4A4D0S4 1761 aa11.67□□□□□ -0.54
CDK5RAP3-229ENST00000583697 STARD3NLO95772 234 aa11.67□□□□□ -0.54
CDK5RAP3-229ENST00000583697 DALRD3Q5D0E6 543 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-229ENST00000583697 NARFQ9UHQ1 456 aa11.67□□□□□ -0.54
CDK5RAP3-229ENST00000583697 NUDCQ9Y266 331 aa11.67□□□□□ -0.54
CDK5RAP3-229ENST00000583697 CANXP27824 592 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-229ENST00000583697 PRKAR2BP31323 418 aa11.66□□□□□ -0.54
CDK5RAP3-229ENST00000583697 NPM2Q86SE8 214 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-229ENST00000583697 ZNF330Q9Y3S2 320 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-229ENST00000583697 COL11A2P13942 1736 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-229ENST00000583697 A0A087WZG4 1122 aa11.65□□□□□ -0.54
CDK5RAP3-229ENST00000583697 CHRNA5P30532 468 aa11.65□□□□□ -0.54
CDK5RAP3-229ENST00000583697 NFIXQ14938 502 aa11.65□□□□□ -0.54
CDK5RAP3-229ENST00000583697 ZNF790Q6PG37 636 aa11.65□□□□□ -0.54
CDK5RAP3-229ENST00000583697 CACNA1SQ13698 1873 aa11.65□□□□□ -0.54
CDK5RAP3-229ENST00000583697 CEMIPQ8WUJ3 1361 aa11.65□□□□□ -0.55
CDK5RAP3-229ENST00000583697 ANKRD31Q8N7Z5 1873 aa11.64□□□□□ -0.55
CDK5RAP3-229ENST00000583697 KIF3CO14782 793 aa11.64□□□□□ -0.55
CDK5RAP3-229ENST00000583697 HSPA6P17066 643 aa11.64□□□□□ -0.55
CDK5RAP3-229ENST00000583697 KCNA3P22001 575 aa11.64□□□□□ -0.55
CDK5RAP3-229ENST00000583697 TM4SF1P30408 202 aa11.64□□□□□ -0.55
CDK5RAP3-229ENST00000583697 RTF1Q92541 710 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-229ENST00000583697 ZNF496Q96IT1 587 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-229ENST00000583697 FMNL2Q96PY5 1086 aa11.64□□□□□ -0.55
CDK5RAP3-229ENST00000583697 TEX13AQ9BXU3 409 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-229ENST00000583697 RSPH6AQ9H0K4 717 aa11.64□□□□□ -0.55
CDK5RAP3-229ENST00000583697 BTBD11A6QL63 1104 aa11.63□□□□□ -0.55
CDK5RAP3-229ENST00000583697 SERPINB2P05120 415 aa11.63□□□□□ -0.55
CDK5RAP3-229ENST00000583697 U2AF1L5P0DN76 240 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-229ENST00000583697 U2AF1Q01081 240 aaKnown RBP eCLIP11.63□□□□□ -0.55
CDK5RAP3-229ENST00000583697 C9orf131Q5VYM1 1079 aa11.63□□□□□ -0.55
CDK5RAP3-229ENST00000583697 IL17REQ8NFR9 667 aa11.63□□□□□ -0.55
CDK5RAP3-229ENST00000583697 RNF181Q9P0P0 153 aa11.63□□□□□ -0.55
CDK5RAP3-229ENST00000583697 ARFGEF2Q9Y6D5 1785 aa11.63□□□□□ -0.55
CDK5RAP3-229ENST00000583697 SBF1O95248 1867 aa11.63□□□□□ -0.55
CDK5RAP3-229ENST00000583697 CARMIL3Q8ND23 1372 aa11.63□□□□□ -0.55
CDK5RAP3-229ENST00000583697 WDR90Q96KV7 1748 aa11.63□□□□□ -0.55
CDK5RAP3-229ENST00000583697 KDM2BQ8NHM5 1336 aa11.62□□□□□ -0.55
CDK5RAP3-229ENST00000583697 NPHP1O15259 732 aa11.62□□□□□ -0.55
CDK5RAP3-229ENST00000583697 NEFMP07197 916 aa11.62□□□□□ -0.55
CDK5RAP3-229ENST00000583697 PPP2R1AP30153 589 aa11.62□□□□□ -0.55
CDK5RAP3-229ENST00000583697 IL6STP40189 918 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-229ENST00000583697 BICDL1Q6ZP65 573 aa11.62□□□□□ -0.55
CDK5RAP3-229ENST00000583697 C16orf71Q8IYS4 520 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-229ENST00000583697 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
CDK5RAP3-229ENST00000583697 DLG5Q8TDM6 1919 aa11.62□□□□□ -0.55
CDK5RAP3-229ENST00000583697 TOMM70O94826 608 aa11.61□□□□□ -0.55
CDK5RAP3-229ENST00000583697 EIF5P55010 431 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-229ENST00000583697 KDM3BQ7LBC6 1761 aa11.61□□□□□ -0.55
CDK5RAP3-229ENST00000583697 H0YIN7 160 aa11.6□□□□□ -0.55
CDK5RAP3-229ENST00000583697 RASSF7Q02833 373 aa11.6□□□□□ -0.55
CDK5RAP3-229ENST00000583697 C2CD5Q86YS7 1000 aa11.6□□□□□ -0.55
CDK5RAP3-229ENST00000583697 PHACTR3Q96KR7 559 aa11.6□□□□□ -0.55
CDK5RAP3-229ENST00000583697 NMRK2Q9NPI5 230 aa11.6□□□□□ -0.55
CDK5RAP3-229ENST00000583697 ZC3H4Q9UPT8 1303 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-229ENST00000583697 TBC1D9BQ66K14 1250 aa11.59□□□□□ -0.55
CDK5RAP3-229ENST00000583697 TBC1D2BQ9UPU7 963 aa11.59□□□□□ -0.55
CDK5RAP3-229ENST00000583697 CCDC88AQ3V6T2 1871 aa11.59□□□□□ -0.55
CDK5RAP3-229ENST00000583697 PDE6BP35913 854 aa11.58□□□□□ -0.56
CDK5RAP3-229ENST00000583697 ST5P78524 1137 aa11.58□□□□□ -0.56
CDK5RAP3-229ENST00000583697 MCM10Q7L590 875 aa11.58□□□□□ -0.56
CDK5RAP3-229ENST00000583697 DZIP3Q86Y13 1208 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-229ENST00000583697 TTLL6Q8N841 843 aa11.58□□□□□ -0.56
CDK5RAP3-229ENST00000583697 CNBD1Q8NA66 436 aa11.58□□□□□ -0.56
CDK5RAP3-229ENST00000583697 PDZRN3Q9UPQ7 1066 aa11.58□□□□□ -0.56
CDK5RAP3-229ENST00000583697 ZNF652Q9Y2D9 606 aa11.58□□□□□ -0.56
CDK5RAP3-229ENST00000583697 FER1L6Q2WGJ9 1857 aa11.57□□□□□ -0.56
CDK5RAP3-229ENST00000583697 A1BGP04217 495 aa11.57□□□□□ -0.56
CDK5RAP3-229ENST00000583697 APLP1P51693 650 aa11.57□□□□□ -0.56
CDK5RAP3-229ENST00000583697 PRR5LQ6MZQ0 368 aa11.57□□□□□ -0.56
CDK5RAP3-229ENST00000583697 ZNF622Q969S3 477 aaKnown RBP eCLIP11.57□□□□□ -0.561e-9■■□□□ 13.5
CDK5RAP3-229ENST00000583697 SETDB2Q96T68 719 aa11.57□□□□□ -0.56
CDK5RAP3-229ENST00000583697 DICER1Q9UPY3 1922 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-229ENST00000583697 KCNQ3O43525 872 aa11.56□□□□□ -0.56
CDK5RAP3-229ENST00000583697 HTATSF1O43719 755 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-229ENST00000583697 SNRPA1P09661 255 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-229ENST00000583697 LMNB1P20700 586 aa11.56□□□□□ -0.56
CDK5RAP3-229ENST00000583697 DCTN1Q14203 1278 aa11.56□□□□□ -0.56
CDK5RAP3-229ENST00000583697 BRIP1Q9BX63 1249 aa11.56□□□□□ -0.56
CDK5RAP3-229ENST00000583697 CEP350Q5VT06 3117 aa11.56□□□□□ -0.56
CDK5RAP3-229ENST00000583697 MAPK8IP3Q9UPT6 1336 aa11.56□□□□□ -0.56
CDK5RAP3-229ENST00000583697 CAMTA2O94983 1202 aa11.55□□□□□ -0.56
CDK5RAP3-229ENST00000583697 PIP4K2AP48426 406 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-229ENST00000583697 RBM46Q8TBY0 533 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-229ENST00000583697 CCDC24Q8N4L8 307 aa11.54□□□□□ -0.56
CDK5RAP3-229ENST00000583697 USP16Q9Y5T5 823 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms