RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 RBM42Q9BTD8 480 aaKnown RBP23.19■■□□□ 1.3
NDEL1-217ENST00000583683 TNNQ9UQP3 1299 aa23.19■■□□□ 1.3
NDEL1-217ENST00000583683 IPO8O15397 1037 aaKnown RBP23.19■■□□□ 1.3
NDEL1-217ENST00000583683 ARHGAP45Q92619 1136 aa23.19■■□□□ 1.3
NDEL1-217ENST00000583683 SLC4A9Q96Q91 983 aa23.19■■□□□ 1.3
NDEL1-217ENST00000583683 PDE3AQ14432 1141 aa23.18■■□□□ 1.3
NDEL1-217ENST00000583683 G2E3Q7L622 706 aa23.18■■□□□ 1.3
NDEL1-217ENST00000583683 DBF4Q9UBU7 674 aaPredicted RBP23.18■■□□□ 1.3
NDEL1-217ENST00000583683 TJP1Q07157 1748 aa23.18■■□□□ 1.3
NDEL1-217ENST00000583683 PALLDQ8WX93 1383 aa23.18■■□□□ 1.3
NDEL1-217ENST00000583683 SMARCC1Q92922 1105 aaPredicted RBP23.17■■□□□ 1.3
NDEL1-217ENST00000583683 PDIA6Q15084 440 aa23.16■■□□□ 1.3
NDEL1-217ENST00000583683 CLUAP1Q96AJ1 413 aa23.16■■□□□ 1.3
NDEL1-217ENST00000583683 CICQ96RK0 1608 aaPredicted RBP23.16■■□□□ 1.3
NDEL1-217ENST00000583683 PTPRCP08575 1304 aa23.15■■□□□ 1.3
NDEL1-217ENST00000583683 ANXA1P04083 346 aa23.15■■□□□ 1.3
NDEL1-217ENST00000583683 RLBP1P12271 317 aa23.15■■□□□ 1.3
NDEL1-217ENST00000583683 PROSER3Q2NL68 480 aa23.15■■□□□ 1.3
NDEL1-217ENST00000583683 PANK1Q8TE04 598 aa23.15■■□□□ 1.3
NDEL1-217ENST00000583683 BCL11BQ9C0K0 894 aaPredicted RBP23.15■■□□□ 1.3
NDEL1-217ENST00000583683 DDX21Q9NR30 783 aaKnown RBP eCLIP23.15■■□□□ 1.3
NDEL1-217ENST00000583683 ZNF831Q5JPB2 1677 aa23.15■■□□□ 1.3
NDEL1-217ENST00000583683 FLIIQ13045 1269 aa23.15■■□□□ 1.3
NDEL1-217ENST00000583683 DNAJC10Q8IXB1 793 aa23.15■■□□□ 1.3
NDEL1-217ENST00000583683 TEX13AQ9BXU3 409 aaPredicted RBP23.15■■□□□ 1.3
NDEL1-217ENST00000583683 LOC102724428A0A0B4J2F2 783 aa23.14■■□□□ 1.29
NDEL1-217ENST00000583683 SIK1P57059 783 aa23.14■■□□□ 1.29
NDEL1-217ENST00000583683 DZIP1LQ8IYY4 767 aaKnown RBP23.14■■□□□ 1.29
NDEL1-217ENST00000583683 PHAXQ9H814 394 aaKnown RBP23.14■■□□□ 1.29
NDEL1-217ENST00000583683 LY75O60449 1722 aa23.13■■□□□ 1.29
NDEL1-217ENST00000583683 MS4A1P11836 297 aa23.12■■□□□ 1.29
NDEL1-217ENST00000583683 FTSJ3Q8IY81 847 aaKnown RBP23.12■■□□□ 1.29
NDEL1-217ENST00000583683 CRBNQ96SW2 442 aa23.12■■□□□ 1.29
NDEL1-217ENST00000583683 API5Q9BZZ5 524 aaKnown RBP23.12■■□□□ 1.29
NDEL1-217ENST00000583683 ERBB4Q15303 1308 aa23.12■■□□□ 1.29
NDEL1-217ENST00000583683 HYPKQ9NX55 129 aa23.12■■□□□ 1.29
NDEL1-217ENST00000583683 LRP10Q7Z4F1 713 aa23.11■■□□□ 1.29
NDEL1-217ENST00000583683 TRIM37O94972 964 aa23.1■■□□□ 1.29
NDEL1-217ENST00000583683 A1BGP04217 495 aa23.1■■□□□ 1.29
NDEL1-217ENST00000583683 ATP6V1AP38606 617 aa23.1■■□□□ 1.29
NDEL1-217ENST00000583683 PIP4K2AP48426 406 aaPredicted RBP23.1■■□□□ 1.29
NDEL1-217ENST00000583683 EXOC6Q8TAG9 804 aa23.1■■□□□ 1.29
NDEL1-217ENST00000583683 ABCC4O15439 1325 aa23.1■■□□□ 1.29
NDEL1-217ENST00000583683 COL5A3P25940 1745 aaPredicted RBP23.1■■□□□ 1.29
NDEL1-217ENST00000583683 NBPF26B4DH59 902 aa23.1■■□□□ 1.29
NDEL1-217ENST00000583683 STARD3NLO95772 234 aa23.1■■□□□ 1.29
NDEL1-217ENST00000583683 MYL6BP14649 208 aa23.1■■□□□ 1.29
NDEL1-217ENST00000583683 FKBP5Q13451 457 aaPredicted RBP23.1■■□□□ 1.29
NDEL1-217ENST00000583683 NBPF14Q5TI25 921 aa23.1■■□□□ 1.29
NDEL1-217ENST00000583683 NBPF10Q6P3W6 841 aaKnown RBP23.1■■□□□ 1.29
NDEL1-217ENST00000583683 NBPF15Q8N660 670 aa23.1■■□□□ 1.29
NDEL1-217ENST00000583683 CYP19A1P11511 503 aaPredicted RBP23.09■■□□□ 1.29
NDEL1-217ENST00000583683 ERICH6BQ5W0A0 696 aa23.09■■□□□ 1.29
NDEL1-217ENST00000583683 COG6Q9Y2V7 657 aa23.09■■□□□ 1.29
NDEL1-217ENST00000583683 ITPK1Q13572 414 aa23.08■■□□□ 1.29
NDEL1-217ENST00000583683 TMEM57Q8N5G2 664 aa23.08■■□□□ 1.28
NDEL1-217ENST00000583683 F6X3S4 739 aa23.06■■□□□ 1.28
NDEL1-217ENST00000583683 MVPQ14764 893 aaKnown RBP23.05■■□□□ 1.28
NDEL1-217ENST00000583683 RREB1Q92766 1687 aa23.05■■□□□ 1.28
NDEL1-217ENST00000583683 MYH14Q7Z406 1995 aaKnown RBP23.05■■□□□ 1.28
NDEL1-217ENST00000583683 N4BP2Q86UW6 1770 aaPredicted RBP23.05■■□□□ 1.28
NDEL1-217ENST00000583683 TAF1LQ8IZX4 1826 aa23.04■■□□□ 1.28
NDEL1-217ENST00000583683 COPS6Q7L5N1 327 aa23.04■■□□□ 1.28
NDEL1-217ENST00000583683 XAGE3Q8WTP9 111 aa23.04■■□□□ 1.28
NDEL1-217ENST00000583683 ADCY9O60503 1353 aa23.04■■□□□ 1.28
NDEL1-217ENST00000583683 KCNQ4P56696 695 aa23.03■■□□□ 1.28
NDEL1-217ENST00000583683 AIMP1Q12904 312 aaKnown RBP23.03■■□□□ 1.28
NDEL1-217ENST00000583683 PI4KAP2A4QPH2 592 aa23.03■■□□□ 1.28
NDEL1-217ENST00000583683 INTS3Q68E01 1043 aaKnown RBP23.03■■□□□ 1.28
NDEL1-217ENST00000583683 ITPRIPQ8IWB1 547 aa23.03■■□□□ 1.28
NDEL1-217ENST00000583683 PI4KAP1Q8N8J0 262 aa23.03■■□□□ 1.28
NDEL1-217ENST00000583683 TNS1Q9HBL0 1735 aaKnown RBP23.03■■□□□ 1.28
NDEL1-217ENST00000583683 ZBTB1Q9Y2K1 713 aa23.02■■□□□ 1.28
NDEL1-217ENST00000583683 PXDNLA1KZ92 1463 aa23.01■■□□□ 1.27
NDEL1-217ENST00000583683 CRKLP46109 303 aaKnown RBP23.01■■□□□ 1.27
NDEL1-217ENST00000583683 INTS5Q6P9B9 1019 aaKnown RBP23.01■■□□□ 1.27
NDEL1-217ENST00000583683 SLC4A10Q6U841 1118 aa23.01■■□□□ 1.27
NDEL1-217ENST00000583683 LINC00116Q8NCU8 138 aa23.01■■□□□ 1.27
NDEL1-217ENST00000583683 CCNL1Q9UK58 526 aaPredicted RBP23.01■■□□□ 1.27
NDEL1-217ENST00000583683 DDX58O95786 925 aaKnown RBP23.01■■□□□ 1.27
NDEL1-217ENST00000583683 KSR2Q6VAB6 950 aa23.01■■□□□ 1.27
NDEL1-217ENST00000583683 CCDC87Q9NVE4 849 aa23■■□□□ 1.27
NDEL1-217ENST00000583683 DDX19BQ9UMR2 479 aa23■■□□□ 1.27
NDEL1-217ENST00000583683 ARFGEF2Q9Y6D5 1785 aa22.99■■□□□ 1.27
NDEL1-217ENST00000583683 DNAAF4Q8WXU2 420 aa22.99■■□□□ 1.27
NDEL1-217ENST00000583683 MAP3K2Q9Y2U5 619 aa22.99■■□□□ 1.27
NDEL1-217ENST00000583683 ANKRD13DQ6ZTN6 518 aa22.98■■□□□ 1.27
NDEL1-217ENST00000583683 NUP188Q5SRE5 1749 aa22.98■■□□□ 1.27
NDEL1-217ENST00000583683 IL6STP40189 918 aaPredicted RBP22.98■■□□□ 1.27
NDEL1-217ENST00000583683 CCT4P50991 539 aaKnown RBP22.98■■□□□ 1.27
NDEL1-217ENST00000583683 TTLL7Q6ZT98 887 aa22.98■■□□□ 1.27
NDEL1-217ENST00000583683 CNTNAP4Q9C0A0 1308 aa22.96■■□□□ 1.27
NDEL1-217ENST00000583683 RIC3Q7Z5B4 369 aa22.96■■□□□ 1.27
NDEL1-217ENST00000583683 LRRC4BQ9NT99 713 aa22.96■■□□□ 1.27
NDEL1-217ENST00000583683 PPP4R2Q9NY27 417 aa22.96■■□□□ 1.27
NDEL1-217ENST00000583683 ZNF330Q9Y3S2 320 aaPredicted RBP22.96■■□□□ 1.27
NDEL1-217ENST00000583683 ATP10DQ9P241 1426 aa22.96■■□□□ 1.27
NDEL1-217ENST00000583683 ZBTB7BO15156 539 aaPredicted RBP22.96■■□□□ 1.27
NDEL1-217ENST00000583683 PLSCR1O15162 318 aa22.96■■□□□ 1.27
NDEL1-217ENST00000583683 APBA3O96018 575 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms