RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 PLEKHM2Q8IWE5 1019 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 PDRG1Q9NUG6 133 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 MROH1Q8NDA8 1641 aa6.97□□□□□ -1.29
RTTN-209ENST00000583043 SNRPA1P09661 255 aaKnown RBP6.96□□□□□ -1.29
RTTN-209ENST00000583043 SAFBQ15424 915 aaKnown RBP eCLIP6.96□□□□□ -1.29
RTTN-209ENST00000583043 ATL3Q6DD88 541 aa6.96□□□□□ -1.29
RTTN-209ENST00000583043 DMRT2Q9Y5R5 561 aa6.96□□□□□ -1.29
RTTN-209ENST00000583043 CDC42BPGQ6DT37 1551 aa6.96□□□□□ -1.29
RTTN-209ENST00000583043 XBP1P17861 261 aa6.96□□□□□ -1.3
RTTN-209ENST00000583043 MTHFSDQ2M296 383 aaKnown RBP6.96□□□□□ -1.3
RTTN-209ENST00000583043 HSP90AB2PQ58FF8 381 aa6.96□□□□□ -1.3
RTTN-209ENST00000583043 AMOTL1Q8IY63 956 aa6.96□□□□□ -1.3
RTTN-209ENST00000583043 ZFYP08048 801 aaPredicted RBP6.96□□□□□ -1.3
RTTN-209ENST00000583043 RHPN1Q8TCX5 695 aa6.96□□□□□ -1.3
RTTN-209ENST00000583043 PHACTR3Q96KR7 559 aa6.96□□□□□ -1.3
RTTN-209ENST00000583043 ESYT1Q9BSJ8 1104 aa6.96□□□□□ -1.3
RTTN-209ENST00000583043 NAP1L2Q9ULW6 460 aaPredicted RBP6.96□□□□□ -1.3
RTTN-209ENST00000583043 BECN2A8MW95 431 aa6.96□□□□□ -1.3
RTTN-209ENST00000583043 PIP4K2AP48426 406 aaPredicted RBP6.96□□□□□ -1.3
RTTN-209ENST00000583043 WASF1Q92558 559 aa6.96□□□□□ -1.3
RTTN-209ENST00000583043 EYA1Q99502 592 aa6.96□□□□□ -1.3
RTTN-209ENST00000583043 THUMPD2Q9BTF0 503 aaKnown RBP6.96□□□□□ -1.3
RTTN-209ENST00000583043 TNPO1Q92973 898 aaKnown RBP6.96□□□□□ -1.3
RTTN-209ENST00000583043 PPLO60437 1756 aa6.95□□□□□ -1.3
RTTN-209ENST00000583043 AKAP17AQ02040 695 aaKnown RBP6.95□□□□□ -1.3
RTTN-209ENST00000583043 AACSQ86V21 672 aa6.95□□□□□ -1.3
RTTN-209ENST00000583043 CEP126Q9P2H0 1117 aa6.95□□□□□ -1.3
RTTN-209ENST00000583043 PIK3C2BO00750 1634 aa6.95□□□□□ -1.3
RTTN-209ENST00000583043 STARD3NLO95772 234 aa6.95□□□□□ -1.3
RTTN-209ENST00000583043 KRT28Q7Z3Y7 464 aa6.95□□□□□ -1.3
RTTN-209ENST00000583043 ZSCAN30Q86W11 494 aa6.95□□□□□ -1.3
RTTN-209ENST00000583043 GNL3LQ9NVN8 582 aaKnown RBP6.95□□□□□ -1.3
RTTN-209ENST00000583043 LRRFIP2Q9Y608 721 aaKnown RBP6.95□□□□□ -1.3
RTTN-209ENST00000583043 IBTKQ9P2D0 1353 aaPredicted RBP6.95□□□□□ -1.3
RTTN-209ENST00000583043 ERICH2A1L162 156 aa6.95□□□□□ -1.3
RTTN-209ENST00000583043 SDSP20132 328 aa6.95□□□□□ -1.3
RTTN-209ENST00000583043 PLCB2Q00722 1185 aa6.95□□□□□ -1.3
RTTN-209ENST00000583043 DCAF5Q96JK2 942 aa6.95□□□□□ -1.3
RTTN-209ENST00000583043 FBXO3Q9UK99 471 aa6.94□□□□□ -1.3
RTTN-209ENST00000583043 METP08581 1390 aa6.94□□□□□ -1.3
RTTN-209ENST00000583043 KIF2AO00139 706 aaPredicted RBP6.94□□□□□ -1.3
RTTN-209ENST00000583043 NEMFO60524 1076 aa6.94□□□□□ -1.3
RTTN-209ENST00000583043 CDK11BP21127 795 aaKnown RBP6.94□□□□□ -1.3
RTTN-209ENST00000583043 CCDC183Q5T5S1 534 aa6.94□□□□□ -1.3
RTTN-209ENST00000583043 TM6SF1Q9BZW5 370 aa6.94□□□□□ -1.3
RTTN-209ENST00000583043 USP26Q9BXU7 913 aa6.94□□□□□ -1.3
RTTN-209ENST00000583043 NACAP1Q9BZK3 213 aa6.94□□□□□ -1.3
RTTN-209ENST00000583043 DDX21Q9NR30 783 aaKnown RBP eCLIP6.94□□□□□ -1.3
RTTN-209ENST00000583043 FOXD4L1Q9NU39 408 aa6.94□□□□□ -1.3
RTTN-209ENST00000583043 DDX19AQ9NUU7 478 aaKnown RBP6.94□□□□□ -1.3
RTTN-209ENST00000583043 STAP2Q9UGK3 403 aa6.94□□□□□ -1.3
RTTN-209ENST00000583043 PRPF40AO75400 957 aaKnown RBP6.94□□□□□ -1.3
RTTN-209ENST00000583043 TTF1Q15361 905 aaPredicted RBP6.94□□□□□ -1.3
RTTN-209ENST00000583043 ANKRD24Q8TF21 1146 aa6.94□□□□□ -1.3
RTTN-209ENST00000583043 CCDC47Q96A33 483 aaKnown RBP6.94□□□□□ -1.3
RTTN-209ENST00000583043 TMX4Q9H1E5 349 aaPredicted RBP6.94□□□□□ -1.3
RTTN-209ENST00000583043 ZSCAN16Q9H4T2 348 aaPredicted RBP6.94□□□□□ -1.3
RTTN-209ENST00000583043 BAG4O95429 457 aaKnown RBP6.94□□□□□ -1.3
RTTN-209ENST00000583043 TUBB4AP04350 444 aa6.94□□□□□ -1.3
RTTN-209ENST00000583043 TPM1P09493 284 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 PPP1R42Q7Z4L9 355 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 BRMS1Q9HCU9 246 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 ANKRD20A12PQ8NF67 263 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 BICD2Q8TD16 824 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 DACH1Q9UI36 760 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 EXOC6BQ9Y2D4 811 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 VPS37CA5D8V6 355 aaPredicted RBP6.93□□□□□ -1.3
RTTN-209ENST00000583043 ESPNB1AK53 854 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 CCDC57Q2TAC2 916 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 MEIS3Q99687 375 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 PRDM11Q9NQV5 511 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 PREX1Q8TCU6 1659 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 SLC3A2P08195 630 aaKnown RBP6.93□□□□□ -1.3
RTTN-209ENST00000583043 CDCA7Q9BWT1 371 aaPredicted RBP6.93□□□□□ -1.3
RTTN-209ENST00000583043 DCTN1Q14203 1278 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 SSH3Q8TE77 659 aa6.93□□□□□ -1.3
RTTN-209ENST00000583043 KINO60870 393 aaKnown RBP6.92□□□□□ -1.3
RTTN-209ENST00000583043 LARP1BQ659C4 914 aaKnown RBP6.92□□□□□ -1.3
RTTN-209ENST00000583043 PXDNLA1KZ92 1463 aa6.92□□□□□ -1.3
RTTN-209ENST00000583043 PRKCSHP14314 528 aaPredicted RBP6.92□□□□□ -1.3
RTTN-209ENST00000583043 VPS53Q5VIR6 699 aa6.92□□□□□ -1.3
RTTN-209ENST00000583043 GRM8O00222 908 aa6.92□□□□□ -1.3
RTTN-209ENST00000583043 NPHP1O15259 732 aa6.92□□□□□ -1.3
RTTN-209ENST00000583043 RNMTO43148 476 aaKnown RBP6.92□□□□□ -1.3
RTTN-209ENST00000583043 IL15P40933 162 aaPredicted RBP6.92□□□□□ -1.3
RTTN-209ENST00000583043 UBE2HP62256 183 aa6.92□□□□□ -1.3
RTTN-209ENST00000583043 TMED8Q6PL24 325 aaPredicted RBP6.92□□□□□ -1.3
RTTN-209ENST00000583043 TSPYL6Q8N831 410 aa6.92□□□□□ -1.3
RTTN-209ENST00000583043 NECTIN2Q92692 538 aa6.92□□□□□ -1.3
RTTN-209ENST00000583043 JAKMIP1Q96N16 626 aaKnown RBP6.92□□□□□ -1.3
RTTN-209ENST00000583043 FAM83GA6ND36 823 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 TERF1P54274 439 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 IMMTQ16891 758 aaKnown RBP6.91□□□□□ -1.3
RTTN-209ENST00000583043 TTC39AQ5SRH9 613 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 PYM1Q9BRP8 204 aaKnown RBP6.91□□□□□ -1.3
RTTN-209ENST00000583043 ADGRB2O60241 1585 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 ROBO2Q9HCK4 1378 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 UQCRFS1P1P0C7P4 283 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 NUTM2GQ5VZR2 741 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 TMEM131LA2VDJ0 1609 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms