RNA–Protein interactions for RNA: ENST00000582544.1

CACNB1-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 2

Gene CACNB1, Length 406 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-210ENST00000582544 KNSTRNQ9Y448 316 aa10.72□□□□□ -0.69
CACNB1-210ENST00000582544 USP42Q9H9J4 1324 aaKnown RBP10.72□□□□□ -0.69
CACNB1-210ENST00000582544 KIF3CO14782 793 aa10.71□□□□□ -0.69
CACNB1-210ENST00000582544 COL11A2P13942 1736 aaPredicted RBP10.71□□□□□ -0.69
CACNB1-210ENST00000582544 DDR1Q08345 913 aa10.71□□□□□ -0.69
CACNB1-210ENST00000582544 AKAP4Q5JQC9 854 aa10.71□□□□□ -0.69
CACNB1-210ENST00000582544 SLC52A2Q9HAB3 445 aa10.71□□□□□ -0.69
CACNB1-210ENST00000582544 LGR6Q9HBX8 967 aa10.71□□□□□ -0.69
CACNB1-210ENST00000582544 ARFGEF2Q9Y6D5 1785 aa10.71□□□□□ -0.69
CACNB1-210ENST00000582544 DLG5Q8TDM6 1919 aa10.7□□□□□ -0.7
CACNB1-210ENST00000582544 FER1L6Q2WGJ9 1857 aa10.7□□□□□ -0.7
CACNB1-210ENST00000582544 TNRC6CQ9HCJ0 1690 aaKnown RBP10.7□□□□□ -0.7
CACNB1-210ENST00000582544 SOS1Q07889 1333 aaPredicted RBP10.7□□□□□ -0.7
CACNB1-210ENST00000582544 PTCD1O75127 700 aaKnown RBP10.7□□□□□ -0.7
CACNB1-210ENST00000582544 TM4SF1P30408 202 aa10.7□□□□□ -0.7
CACNB1-210ENST00000582544 C1orf141Q5JVX7 400 aa10.7□□□□□ -0.7
CACNB1-210ENST00000582544 SRP68Q9UHB9 627 aaKnown RBP10.7□□□□□ -0.7
CACNB1-210ENST00000582544 A0A0G2JLW4 131 aa10.69□□□□□ -0.7
CACNB1-210ENST00000582544 SPDYE4A6NLX3 237 aa10.69□□□□□ -0.7
CACNB1-210ENST00000582544 RNMTO43148 476 aaKnown RBP10.69□□□□□ -0.7
CACNB1-210ENST00000582544 DPEP1P16444 411 aa10.69□□□□□ -0.7
CACNB1-210ENST00000582544 WWC3Q9ULE0 1092 aa10.69□□□□□ -0.7
CACNB1-210ENST00000582544 WDR90Q96KV7 1748 aa10.69□□□□□ -0.7
CACNB1-210ENST00000582544 CACNA1SQ13698 1873 aa10.68□□□□□ -0.7
CACNB1-210ENST00000582544 TIAM2Q8IVF5 1701 aa10.68□□□□□ -0.7
CACNB1-210ENST00000582544 POLRMTO00411 1230 aaKnown RBP10.68□□□□□ -0.7
CACNB1-210ENST00000582544 CYP19A1P11511 503 aaPredicted RBP10.68□□□□□ -0.7
CACNB1-210ENST00000582544 DSG3P32926 999 aa10.68□□□□□ -0.7
CACNB1-210ENST00000582544 RFC4P35249 363 aa10.68□□□□□ -0.7
CACNB1-210ENST00000582544 MTHFSDQ2M296 383 aaKnown RBP10.68□□□□□ -0.7
CACNB1-210ENST00000582544 DNAJC10Q8IXB1 793 aa10.68□□□□□ -0.7
CACNB1-210ENST00000582544 BCL2L12Q9HB09 334 aa10.68□□□□□ -0.7
CACNB1-210ENST00000582544 GPBP1L1Q9HC44 474 aaPredicted RBP10.68□□□□□ -0.7
CACNB1-210ENST00000582544 CCDC87Q9NVE4 849 aa10.68□□□□□ -0.7
CACNB1-210ENST00000582544 PCNTO95613 3336 aa10.68□□□□□ -0.7
CACNB1-210ENST00000582544 CEMIPQ8WUJ3 1361 aa10.67□□□□□ -0.7
CACNB1-210ENST00000582544 COL15A1P39059 1388 aa10.66□□□□□ -0.7
CACNB1-210ENST00000582544 HMOX1P09601 288 aa10.66□□□□□ -0.7
CACNB1-210ENST00000582544 HSPA6P17066 643 aa10.66□□□□□ -0.7
CACNB1-210ENST00000582544 SLC39A6Q13433 755 aa10.66□□□□□ -0.7
CACNB1-210ENST00000582544 VSIG10Q8N0Z9 540 aa10.66□□□□□ -0.7
CACNB1-210ENST00000582544 PARP3Q9Y6F1 533 aa10.66□□□□□ -0.7
CACNB1-210ENST00000582544 DIAPH1O60610 1272 aaKnown RBP10.65□□□□□ -0.7
CACNB1-210ENST00000582544 BCS1LQ9Y276 419 aa10.65□□□□□ -0.7
CACNB1-210ENST00000582544 ZBTB1Q9Y2K1 713 aa10.65□□□□□ -0.7
CACNB1-210ENST00000582544 SLX4Q8IY92 1834 aa10.65□□□□□ -0.71
CACNB1-210ENST00000582544 LAMB4A4D0S4 1761 aa10.65□□□□□ -0.71
CACNB1-210ENST00000582544 EIF5P55010 431 aaKnown RBP10.64□□□□□ -0.71
CACNB1-210ENST00000582544 NFIXQ14938 502 aa10.64□□□□□ -0.71
CACNB1-210ENST00000582544 IL17REQ8NFR9 667 aa10.64□□□□□ -0.71
CACNB1-210ENST00000582544 ZNF526Q8TF50 670 aaPredicted RBP10.64□□□□□ -0.71
CACNB1-210ENST00000582544 RTN4Q9NQC3 1192 aaKnown RBP10.64□□□□□ -0.71
CACNB1-210ENST00000582544 NARFQ9UHQ1 456 aa10.64□□□□□ -0.71
CACNB1-210ENST00000582544 KDM3BQ7LBC6 1761 aa10.64□□□□□ -0.71
CACNB1-210ENST00000582544 CARMIL3Q8ND23 1372 aa10.64□□□□□ -0.71
CACNB1-210ENST00000582544 PRELPP51888 382 aa10.63□□□□□ -0.71
CACNB1-210ENST00000582544 CC2D1BQ5T0F9 858 aaKnown RBP10.63□□□□□ -0.71
CACNB1-210ENST00000582544 USPL1Q5W0Q7 1092 aa10.63□□□□□ -0.71
CACNB1-210ENST00000582544 PIM2Q9P1W9 311 aa10.63□□□□□ -0.71
CACNB1-210ENST00000582544 NUP98P52948 1817 aa10.63□□□□□ -0.71
CACNB1-210ENST00000582544 FCHSD2O94868 740 aa10.62□□□□□ -0.71
CACNB1-210ENST00000582544 CHRNA5P30532 468 aa10.62□□□□□ -0.71
CACNB1-210ENST00000582544 HEG1Q9ULI3 1381 aa10.62□□□□□ -0.71
CACNB1-210ENST00000582544 ARHGAP27Q6ZUM4 889 aa10.61□□□□□ -0.71
CACNB1-210ENST00000582544 DNAJC5GQ8N7S2 189 aa10.61□□□□□ -0.71
CACNB1-210ENST00000582544 ZNF496Q96IT1 587 aaPredicted RBP10.61□□□□□ -0.71
CACNB1-210ENST00000582544 RSPH6AQ9H0K4 717 aa10.61□□□□□ -0.71
CACNB1-210ENST00000582544 NMRK2Q9NPI5 230 aa10.61□□□□□ -0.71
CACNB1-210ENST00000582544 TOMM70O94826 608 aa10.6□□□□□ -0.71
CACNB1-210ENST00000582544 DALRD3Q5D0E6 543 aaKnown RBP10.6□□□□□ -0.71
CACNB1-210ENST00000582544 C9orf131Q5VYM1 1079 aa10.6□□□□□ -0.71
CACNB1-210ENST00000582544 ZNF790Q6PG37 636 aa10.6□□□□□ -0.71
CACNB1-210ENST00000582544 PHACTR3Q96KR7 559 aa10.6□□□□□ -0.71
CACNB1-210ENST00000582544 GNAT3A8MTJ3 354 aa10.59□□□□□ -0.71
CACNB1-210ENST00000582544 ZPR1O75312 459 aa10.59□□□□□ -0.71
CACNB1-210ENST00000582544 GAS2L2Q8NHY3 880 aa10.59□□□□□ -0.71
CACNB1-210ENST00000582544 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.71
CACNB1-210ENST00000582544 KCNQ3O43525 872 aa10.58□□□□□ -0.72
CACNB1-210ENST00000582544 SERPINB2P05120 415 aa10.58□□□□□ -0.72
CACNB1-210ENST00000582544 RBM46Q8TBY0 533 aaKnown RBP10.58□□□□□ -0.72
CACNB1-210ENST00000582544 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
CACNB1-210ENST00000582544 NFKBIEO00221 500 aa10.57□□□□□ -0.72
CACNB1-210ENST00000582544 CAMTA2O94983 1202 aa10.57□□□□□ -0.72
CACNB1-210ENST00000582544 IL6STP40189 918 aaPredicted RBP10.57□□□□□ -0.72
CACNB1-210ENST00000582544 ZBTB12Q9Y330 459 aaPredicted RBP10.57□□□□□ -0.72
CACNB1-210ENST00000582544 STARD3NLO95772 234 aa10.56□□□□□ -0.72
CACNB1-210ENST00000582544 CANXP27824 592 aaKnown RBP10.56□□□□□ -0.72
CACNB1-210ENST00000582544 APLP1P51693 650 aa10.56□□□□□ -0.72
CACNB1-210ENST00000582544 RASSF7Q02833 373 aa10.56□□□□□ -0.72
CACNB1-210ENST00000582544 TBC1D9BQ66K14 1250 aa10.56□□□□□ -0.72
CACNB1-210ENST00000582544 RNF181Q9P0P0 153 aa10.56□□□□□ -0.72
CACNB1-210ENST00000582544 SCN4AP35499 1836 aa10.56□□□□□ -0.72
CACNB1-210ENST00000582544 A1BGP04217 495 aa10.55□□□□□ -0.72
CACNB1-210ENST00000582544 PPP2R1AP30153 589 aa10.55□□□□□ -0.72
CACNB1-210ENST00000582544 PRKAR2BP31323 418 aa10.55□□□□□ -0.72
CACNB1-210ENST00000582544 IFFO2Q5TF58 517 aa10.55□□□□□ -0.72
CACNB1-210ENST00000582544 PRR5LQ6MZQ0 368 aa10.55□□□□□ -0.72
CACNB1-210ENST00000582544 TEX13AQ9BXU3 409 aaPredicted RBP10.55□□□□□ -0.72
CACNB1-210ENST00000582544 ADAMTSL1Q8N6G6 1762 aa10.54□□□□□ -0.72
CACNB1-210ENST00000582544 A0A087WZG4 1122 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms