RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 SRCIN1Q9C0H9 1055 aa13.16□□□□□ -0.3
CDK5RAP3-225ENST00000582482 MAP3K2Q9Y2U5 619 aa13.16□□□□□ -0.3
CDK5RAP3-225ENST00000582482 BEND3Q5T5X7 828 aa13.15□□□□□ -0.3
CDK5RAP3-225ENST00000582482 ANO2Q9NQ90 1003 aa13.15□□□□□ -0.3
CDK5RAP3-225ENST00000582482 IBTKQ9P2D0 1353 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-225ENST00000582482 C1orf141Q5JVX7 400 aa13.15□□□□□ -0.3
CDK5RAP3-225ENST00000582482 DNAAF4Q8WXU2 420 aa13.15□□□□□ -0.3
CDK5RAP3-225ENST00000582482 GNAI3P08754 354 aa13.14□□□□□ -0.31
CDK5RAP3-225ENST00000582482 AKAP4Q5JQC9 854 aa13.14□□□□□ -0.31
CDK5RAP3-225ENST00000582482 CPA1P15085 419 aa13.14□□□□□ -0.31
CDK5RAP3-225ENST00000582482 GAS2L3Q86XJ1 694 aa13.14□□□□□ -0.31
CDK5RAP3-225ENST00000582482 XRCC6P12956 609 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDK5RAP3-225ENST00000582482 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
CDK5RAP3-225ENST00000582482 PLEKHO1Q53GL0 409 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-225ENST00000582482 NFATC2IPQ8NCF5 419 aa13.13□□□□□ -0.31
CDK5RAP3-225ENST00000582482 KCNH5Q8NCM2 988 aa13.13□□□□□ -0.31
CDK5RAP3-225ENST00000582482 SIL1Q9H173 461 aa13.13□□□□□ -0.31
CDK5RAP3-225ENST00000582482 ERC2O15083 957 aa13.13□□□□□ -0.31
CDK5RAP3-225ENST00000582482 COL9A3Q14050 684 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-225ENST00000582482 ESYT1Q9BSJ8 1104 aa13.13□□□□□ -0.31
CDK5RAP3-225ENST00000582482 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-225ENST00000582482 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-225ENST00000582482 CSB-PGBD3P0DP91 1061 aa13.12□□□□□ -0.31
CDK5RAP3-225ENST00000582482 CHMLP26374 656 aa13.12□□□□□ -0.31
CDK5RAP3-225ENST00000582482 NEK4P51957 841 aa13.12□□□□□ -0.31
CDK5RAP3-225ENST00000582482 CCDC9Q9Y3X0 531 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-225ENST00000582482 RHPN1Q8TCX5 695 aa13.12□□□□□ -0.31
CDK5RAP3-225ENST00000582482 ADAMTSL3P82987 1691 aa13.11□□□□□ -0.31
CDK5RAP3-225ENST00000582482 OS9Q13438 667 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-225ENST00000582482 SPG7Q9UQ90 795 aa13.11□□□□□ -0.31
CDK5RAP3-225ENST00000582482 NDUFB9Q9Y6M9 179 aa13.11□□□□□ -0.31
CDK5RAP3-225ENST00000582482 C1orf167Q5SNV9 1468 aa13.11□□□□□ -0.31
CDK5RAP3-225ENST00000582482 ERBB3P21860 1342 aa13.11□□□□□ -0.31
CDK5RAP3-225ENST00000582482 CHGBP05060 677 aa13.11□□□□□ -0.31
CDK5RAP3-225ENST00000582482 MCTP1Q6DN14 999 aa13.11□□□□□ -0.31
CDK5RAP3-225ENST00000582482 KDM3BQ7LBC6 1761 aa13.1□□□□□ -0.31
CDK5RAP3-225ENST00000582482 MED1Q15648 1581 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-225ENST00000582482 TMEM94Q12767 1356 aa13.1□□□□□ -0.31
CDK5RAP3-225ENST00000582482 RABEP1Q15276 862 aa13.1□□□□□ -0.31
CDK5RAP3-225ENST00000582482 SSH3Q8TE77 659 aa13.1□□□□□ -0.31
CDK5RAP3-225ENST00000582482 TLR7Q9NYK1 1049 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-225ENST00000582482 ZDHHC9Q9Y397 364 aa13.1□□□□□ -0.31
CDK5RAP3-225ENST00000582482 ZNF142P52746 1687 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-225ENST00000582482 PI4K2BQ8TCG2 481 aa13.1□□□□□ -0.31
CDK5RAP3-225ENST00000582482 KAZALD1Q96I82 304 aa13.1□□□□□ -0.31
CDK5RAP3-225ENST00000582482 SUCLG2Q96I99 432 aa13.1□□□□□ -0.31
CDK5RAP3-225ENST00000582482 MEGF6O75095 1541 aa13.09□□□□□ -0.31
CDK5RAP3-225ENST00000582482 USP54Q70EL1 1684 aa13.09□□□□□ -0.31
CDK5RAP3-225ENST00000582482 CASC1Q6TDU7 716 aa13.09□□□□□ -0.31
CDK5RAP3-225ENST00000582482 CWC27Q6UX04 472 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-225ENST00000582482 OSBPL3Q9H4L5 887 aa13.09□□□□□ -0.31
CDK5RAP3-225ENST00000582482 C9orf78Q9NZ63 289 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-225ENST00000582482 USP16Q9Y5T5 823 aa13.09□□□□□ -0.31
CDK5RAP3-225ENST00000582482 STRCP1A6NGW2 1772 aa13.09□□□□□ -0.31
CDK5RAP3-225ENST00000582482 TUBGCP6Q96RT7 1819 aa13.09□□□□□ -0.31
CDK5RAP3-225ENST00000582482 NCLP19338 710 aaKnown RBP13.08□□□□□ -0.31
CDK5RAP3-225ENST00000582482 PDIA6Q15084 440 aa13.08□□□□□ -0.31
CDK5RAP3-225ENST00000582482 EPHA10Q5JZY3 1008 aa13.08□□□□□ -0.31
CDK5RAP3-225ENST00000582482 ZNF496Q96IT1 587 aaPredicted RBP13.08□□□□□ -0.31
CDK5RAP3-225ENST00000582482 BAG4O95429 457 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-225ENST00000582482 POLA2Q14181 598 aa13.08□□□□□ -0.32
CDK5RAP3-225ENST00000582482 EDC3Q96F86 508 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-225ENST00000582482 CCDC8Q9H0W5 538 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-225ENST00000582482 RBM27Q9P2N5 1060 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-225ENST00000582482 KDM6AO15550 1401 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-225ENST00000582482 TRPM3Q9HCF6 1732 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-225ENST00000582482 GOLGA6L3A6NEY3 463 aa13.07□□□□□ -0.32
CDK5RAP3-225ENST00000582482 ATP5J2-PTCD1G3V325 749 aa13.07□□□□□ -0.32
CDK5RAP3-225ENST00000582482 PTCD1O75127 700 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-225ENST00000582482 BICC1Q9H694 974 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-225ENST00000582482 NSFL1CQ9UNZ2 370 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-225ENST00000582482 LMO7Q8WWI1 1683 aa13.07□□□□□ -0.32
CDK5RAP3-225ENST00000582482 ATF3P18847 181 aa13.07□□□□□ -0.32
CDK5RAP3-225ENST00000582482 C19orf44Q9H6X5 657 aa13.07□□□□□ -0.32
CDK5RAP3-225ENST00000582482 DBF4Q9UBU7 674 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-225ENST00000582482 CYP27B1O15528 508 aa13.06□□□□□ -0.32
CDK5RAP3-225ENST00000582482 REC8O95072 547 aa13.06□□□□□ -0.32
CDK5RAP3-225ENST00000582482 IGKV5-2P06315 115 aa13.06□□□□□ -0.32
CDK5RAP3-225ENST00000582482 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
CDK5RAP3-225ENST00000582482 XAGE3Q8WTP9 111 aa13.06□□□□□ -0.32
CDK5RAP3-225ENST00000582482 TMX3Q96JJ7 454 aa13.06□□□□□ -0.32
CDK5RAP3-225ENST00000582482 RRAGDQ9NQL2 400 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-225ENST00000582482 RAPGEF4Q8WZA2 1011 aa13.06□□□□□ -0.32
CDK5RAP3-225ENST00000582482 SLIT3O75094 1523 aa13.05□□□□□ -0.32
CDK5RAP3-225ENST00000582482 C5P01031 1676 aa13.05□□□□□ -0.32
CDK5RAP3-225ENST00000582482 ZNF790Q6PG37 636 aa13.05□□□□□ -0.32
CDK5RAP3-225ENST00000582482 COPS6Q7L5N1 327 aa13.05□□□□□ -0.32
CDK5RAP3-225ENST00000582482 MYD88Q99836 296 aa13.05□□□□□ -0.32
CDK5RAP3-225ENST00000582482 GDPD2Q9HCC8 539 aa13.05□□□□□ -0.32
CDK5RAP3-225ENST00000582482 FSD2A1L4K1 749 aa13.05□□□□□ -0.32
CDK5RAP3-225ENST00000582482 PRKCSHP14314 528 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-225ENST00000582482 PHKG2P15735 406 aa13.04□□□□□ -0.32
CDK5RAP3-225ENST00000582482 PTH1RQ03431 593 aa13.04□□□□□ -0.32
CDK5RAP3-225ENST00000582482 AMOTQ4VCS5 1084 aa13.04□□□□□ -0.32
CDK5RAP3-225ENST00000582482 RIC3Q7Z5B4 369 aa13.04□□□□□ -0.32
CDK5RAP3-225ENST00000582482 DDX11L8A8MPP1 907 aa13.04□□□□□ -0.32
CDK5RAP3-225ENST00000582482 SLFNL1Q499Z3 407 aa13.04□□□□□ -0.32
CDK5RAP3-225ENST00000582482 KSR2Q6VAB6 950 aa13.04□□□□□ -0.32
CDK5RAP3-225ENST00000582482 AACSQ86V21 672 aa13.04□□□□□ -0.32
CDK5RAP3-225ENST00000582482 ANO8Q9HCE9 1232 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms