RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 DDNO94850 711 aaPredicted RBP12.99□□□□□ -0.33
GGA3-212ENST00000582376 CRKLP46109 303 aaKnown RBP12.99□□□□□ -0.33
GGA3-212ENST00000582376 MYH14Q7Z406 1995 aaKnown RBP12.99□□□□□ -0.33
GGA3-212ENST00000582376 C2CD5Q86YS7 1000 aa12.98□□□□□ -0.33
GGA3-212ENST00000582376 BEGAINQ9BUH8 593 aa12.98□□□□□ -0.33
GGA3-212ENST00000582376 DLEC1Q9Y238 1755 aa12.97□□□□□ -0.33
GGA3-212ENST00000582376 TONSLQ96HA7 1378 aa12.97□□□□□ -0.33
GGA3-212ENST00000582376 ERVV-2B6SEH9 535 aa12.97□□□□□ -0.33
GGA3-212ENST00000582376 ZPR1O75312 459 aa12.97□□□□□ -0.33
GGA3-212ENST00000582376 ITGBL1O95965 494 aaPredicted RBP12.97□□□□□ -0.33
GGA3-212ENST00000582376 CARD11Q9BXL7 1154 aa12.97□□□□□ -0.33
GGA3-212ENST00000582376 H0YIN7 160 aa12.96□□□□□ -0.33
GGA3-212ENST00000582376 USPL1Q5W0Q7 1092 aa12.96□□□□□ -0.33
GGA3-212ENST00000582376 TAF1DQ9H5J8 278 aaPredicted RBP12.96□□□□□ -0.33
GGA3-212ENST00000582376 DICER1Q9UPY3 1922 aaKnown RBP12.96□□□□□ -0.34
GGA3-212ENST00000582376 PTCD1O75127 700 aaKnown RBP12.95□□□□□ -0.34
GGA3-212ENST00000582376 ABT1Q9ULW3 272 aaKnown RBP12.95□□□□□ -0.34
GGA3-212ENST00000582376 C21orf2O43822 256 aa12.94□□□□□ -0.34
GGA3-212ENST00000582376 HSP90AB1P08238 724 aaKnown RBP12.94□□□□□ -0.34
GGA3-212ENST00000582376 NFIXQ14938 502 aa12.94□□□□□ -0.34
GGA3-212ENST00000582376 EAPPQ56P03 285 aaPredicted RBP12.94□□□□□ -0.34
GGA3-212ENST00000582376 L3MBTL3Q96JM7 780 aaPredicted RBP12.94□□□□□ -0.34
GGA3-212ENST00000582376 EYA1Q99502 592 aa12.94□□□□□ -0.34
GGA3-212ENST00000582376 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
GGA3-212ENST00000582376 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
GGA3-212ENST00000582376 EMILIN1Q9Y6C2 1016 aa12.94□□□□□ -0.34
GGA3-212ENST00000582376 AFDNP55196 1824 aaKnown RBP12.94□□□□□ -0.34
GGA3-212ENST00000582376 LTBP3Q9NS15 1303 aa12.93□□□□□ -0.34
GGA3-212ENST00000582376 SERPINB2P05120 415 aa12.93□□□□□ -0.34
GGA3-212ENST00000582376 CABP4P57796 275 aa12.93□□□□□ -0.34
GGA3-212ENST00000582376 MCOLN1Q9GZU1 580 aa12.93□□□□□ -0.34
GGA3-212ENST00000582376 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
GGA3-212ENST00000582376 NRXN2Q9P2S2 1712 aa12.93□□□□□ -0.34
GGA3-212ENST00000582376 PDE4DIPQ5VU43 2346 aa12.93□□□□□ -0.34
GGA3-212ENST00000582376 SCN4AP35499 1836 aa12.92□□□□□ -0.34
GGA3-212ENST00000582376 PPM1GO15355 546 aaPredicted RBP12.92□□□□□ -0.34
GGA3-212ENST00000582376 INTS5Q6P9B9 1019 aaKnown RBP12.92□□□□□ -0.34
GGA3-212ENST00000582376 ZNF622Q969S3 477 aaKnown RBP eCLIP12.92□□□□□ -0.344e-6■□□□□ 8.2
GGA3-212ENST00000582376 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
GGA3-212ENST00000582376 ECE1P42892 770 aa12.91□□□□□ -0.34
GGA3-212ENST00000582376 PAXIP1Q6ZW49 1069 aaPredicted RBP12.91□□□□□ -0.34
GGA3-212ENST00000582376 CNTROBQ8N137 903 aa12.91□□□□□ -0.34
GGA3-212ENST00000582376 ADAMTS7Q9UKP4 1686 aa12.91□□□□□ -0.34
GGA3-212ENST00000582376 CARMIL3Q8ND23 1372 aa12.91□□□□□ -0.34
GGA3-212ENST00000582376 CAPNS2Q96L46 248 aa12.9□□□□□ -0.34
GGA3-212ENST00000582376 SIN3AQ96ST3 1273 aa12.9□□□□□ -0.34
GGA3-212ENST00000582376 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
GGA3-212ENST00000582376 HACL1Q9UJ83 578 aa12.9□□□□□ -0.34
GGA3-212ENST00000582376 TSKSQ9UJT2 592 aa12.9□□□□□ -0.34
GGA3-212ENST00000582376 PDZRN3Q9UPQ7 1066 aa12.9□□□□□ -0.34
GGA3-212ENST00000582376 THSD7BQ9C0I4 1608 aa12.9□□□□□ -0.34
GGA3-212ENST00000582376 SOS1Q07889 1333 aaPredicted RBP12.89□□□□□ -0.35
GGA3-212ENST00000582376 TJP1Q07157 1748 aa12.89□□□□□ -0.35
GGA3-212ENST00000582376 EPHX2P34913 555 aa12.89□□□□□ -0.35
GGA3-212ENST00000582376 MAP1SQ66K74 1059 aaPredicted RBP12.89□□□□□ -0.35
GGA3-212ENST00000582376 GPR101Q96P66 508 aaPredicted RBP12.89□□□□□ -0.35
GGA3-212ENST00000582376 WASHC2AQ641Q2 1341 aa12.88□□□□□ -0.35
GGA3-212ENST00000582376 GRM1Q13255 1194 aa12.88□□□□□ -0.35
GGA3-212ENST00000582376 NEUROD1Q13562 356 aa12.88□□□□□ -0.35
GGA3-212ENST00000582376 DGKZQ13574 1117 aa12.88□□□□□ -0.35
GGA3-212ENST00000582376 PRPF38BQ5VTL8 546 aaKnown RBP12.88□□□□□ -0.35
GGA3-212ENST00000582376 PNMA8AQ86V59 439 aaPredicted RBP12.88□□□□□ -0.35
GGA3-212ENST00000582376 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
GGA3-212ENST00000582376 ADAMTSL1Q8N6G6 1762 aa12.87□□□□□ -0.35
GGA3-212ENST00000582376 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
GGA3-212ENST00000582376 PDE6BP35913 854 aa12.87□□□□□ -0.35
GGA3-212ENST00000582376 SOGA3Q5TF21 947 aa12.87□□□□□ -0.35
GGA3-212ENST00000582376 CYP4F22Q6NT55 531 aa12.87□□□□□ -0.35
GGA3-212ENST00000582376 TESK2Q96S53 571 aa12.87□□□□□ -0.35
GGA3-212ENST00000582376 BCL2L12Q9HB09 334 aa12.87□□□□□ -0.35
GGA3-212ENST00000582376 DDX21Q9NR30 783 aaKnown RBP eCLIP12.87□□□□□ -0.35
GGA3-212ENST00000582376 COL15A1P39059 1388 aa12.86□□□□□ -0.35
GGA3-212ENST00000582376 CA12O43570 354 aa12.86□□□□□ -0.35
GGA3-212ENST00000582376 PLEKHO1Q53GL0 409 aaPredicted RBP12.86□□□□□ -0.35
GGA3-212ENST00000582376 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
GGA3-212ENST00000582376 DNAJC10Q8IXB1 793 aa12.86□□□□□ -0.35
GGA3-212ENST00000582376 BRIP1Q9BX63 1249 aa12.86□□□□□ -0.35
GGA3-212ENST00000582376 ST20-MTHFSA0A0A6YYL1 179 aa12.85□□□□□ -0.35
GGA3-212ENST00000582376 MAP2K2P36507 400 aa12.85□□□□□ -0.35
GGA3-212ENST00000582376 MTHFSP49914 203 aa12.85□□□□□ -0.35
GGA3-212ENST00000582376 BICDL1Q6ZP65 573 aa12.85□□□□□ -0.35
GGA3-212ENST00000582376 NFATC2IPQ8NCF5 419 aa12.85□□□□□ -0.35
GGA3-212ENST00000582376 CNKSR1Q969H4 720 aa12.85□□□□□ -0.35
GGA3-212ENST00000582376 ZNF541Q9H0D2 1346 aa12.85□□□□□ -0.35
GGA3-212ENST00000582376 LTBP1Q14766 1721 aa12.85□□□□□ -0.35
GGA3-212ENST00000582376 ANKRD26Q9UPS8 1709 aa12.84□□□□□ -0.35
GGA3-212ENST00000582376 RNF123Q5XPI4 1314 aa12.84□□□□□ -0.35
GGA3-212ENST00000582376 ANKRD31Q8N7Z5 1873 aa12.83□□□□□ -0.36
GGA3-212ENST00000582376 AOC2O75106 756 aa12.83□□□□□ -0.36
GGA3-212ENST00000582376 CYP19A1P11511 503 aaPredicted RBP12.83□□□□□ -0.36
GGA3-212ENST00000582376 AMOTQ4VCS5 1084 aa12.83□□□□□ -0.36
GGA3-212ENST00000582376 PRPF40BQ6NWY9 871 aaKnown RBP12.83□□□□□ -0.36
GGA3-212ENST00000582376 CASP8AP2Q9UKL3 1982 aa12.83□□□□□ -0.36
GGA3-212ENST00000582376 COL11A2P13942 1736 aaPredicted RBP12.82□□□□□ -0.36
GGA3-212ENST00000582376 SOX10P56693 466 aa12.82□□□□□ -0.36
GGA3-212ENST00000582376 EIF4A2Q14240 407 aaKnown RBP12.82□□□□□ -0.36
GGA3-212ENST00000582376 C1orf141Q5JVX7 400 aa12.82□□□□□ -0.36
GGA3-212ENST00000582376 STYK1Q6J9G0 422 aa12.82□□□□□ -0.36
GGA3-212ENST00000582376 CCDC24Q8N4L8 307 aa12.82□□□□□ -0.36
GGA3-212ENST00000582376 ZBTB1Q9Y2K1 713 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms