RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 LRP2BPQ9P2M1 347 aa16.86■□□□□ 0.29
CSNK1D-217ENST00000581241 SPDYE4A6NLX3 237 aa16.86■□□□□ 0.29
CSNK1D-217ENST00000581241 VPS36Q86VN1 386 aa16.86■□□□□ 0.29
CSNK1D-217ENST00000581241 ALS2CR12Q96Q35 445 aa16.86■□□□□ 0.29
CSNK1D-217ENST00000581241 SSRP1Q08945 709 aaKnown RBP16.85■□□□□ 0.29
CSNK1D-217ENST00000581241 SSH1Q8WYL5 1049 aa16.85■□□□□ 0.29
CSNK1D-217ENST00000581241 RBM27Q9P2N5 1060 aaKnown RBP16.85■□□□□ 0.29
CSNK1D-217ENST00000581241 KLHL40Q2TBA0 621 aa16.85■□□□□ 0.29
CSNK1D-217ENST00000581241 CCDC141Q6ZP82 1450 aa16.85■□□□□ 0.29
CSNK1D-217ENST00000581241 IDH1O75874 414 aaKnown RBP16.85■□□□□ 0.29
CSNK1D-217ENST00000581241 LRSAM1Q6UWE0 723 aa16.85■□□□□ 0.29
CSNK1D-217ENST00000581241 SPINK5Q9NQ38 1064 aaPredicted RBP16.85■□□□□ 0.29
CSNK1D-217ENST00000581241 AFAP1Q8N556 730 aa16.84■□□□□ 0.29
CSNK1D-217ENST00000581241 NAA15Q9BXJ9 866 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-217ENST00000581241 GIGYF2Q6Y7W6 1299 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-217ENST00000581241 SEC63Q9UGP8 760 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-217ENST00000581241 CCDC196A0A1B0GTZ2 297 aa16.84■□□□□ 0.29
CSNK1D-217ENST00000581241 STX6O43752 255 aa16.84■□□□□ 0.29
CSNK1D-217ENST00000581241 UBE2HP62256 183 aa16.84■□□□□ 0.29
CSNK1D-217ENST00000581241 FAM69CQ0P6D2 419 aa16.84■□□□□ 0.29
CSNK1D-217ENST00000581241 UBE2Q2Q8WVN8 375 aa16.84■□□□□ 0.29
CSNK1D-217ENST00000581241 TBC1D32Q96NH3 1257 aa16.83■□□□□ 0.29
CSNK1D-217ENST00000581241 TBC1D9Q6ZT07 1266 aa16.83■□□□□ 0.29
CSNK1D-217ENST00000581241 ZHX1Q9UKY1 873 aaPredicted RBP16.83■□□□□ 0.29
CSNK1D-217ENST00000581241 GUCY1B3Q02153 619 aa16.83■□□□□ 0.28
CSNK1D-217ENST00000581241 TROQ12816 1431 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-217ENST00000581241 IBSPP21815 317 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-217ENST00000581241 TRERF1Q96PN7 1200 aa16.83■□□□□ 0.28
CSNK1D-217ENST00000581241 IGHMBP2P38935 993 aaKnown RBP16.82■□□□□ 0.28
CSNK1D-217ENST00000581241 CPLX3Q8WVH0 158 aa16.82■□□□□ 0.28
CSNK1D-217ENST00000581241 BOLA2Q9H3K6 86 aa16.82■□□□□ 0.28
CSNK1D-217ENST00000581241 TOP2BQ02880 1626 aa16.82■□□□□ 0.28
CSNK1D-217ENST00000581241 USP5P45974 858 aa16.82■□□□□ 0.28
CSNK1D-217ENST00000581241 LMAN1P49257 510 aa16.82■□□□□ 0.28
CSNK1D-217ENST00000581241 STRN4Q9NRL3 753 aa16.82■□□□□ 0.28
CSNK1D-217ENST00000581241 PTPN23Q9H3S7 1636 aa16.82■□□□□ 0.28
CSNK1D-217ENST00000581241 TIGD1Q96MW7 591 aa16.82■□□□□ 0.28
CSNK1D-217ENST00000581241 NEBLO76041 1014 aa16.82■□□□□ 0.28
CSNK1D-217ENST00000581241 PTPRCP08575 1304 aa16.81■□□□□ 0.28
CSNK1D-217ENST00000581241 GPATCH11Q8N954 259 aa16.81■□□□□ 0.28
CSNK1D-217ENST00000581241 CAVIN2O95810 425 aa16.81■□□□□ 0.28
CSNK1D-217ENST00000581241 BMP2KLQ5H9B9 411 aa16.81■□□□□ 0.28
CSNK1D-217ENST00000581241 SLC12A7Q9Y666 1083 aa16.81■□□□□ 0.28
CSNK1D-217ENST00000581241 METTL24Q5JXM2 366 aa16.81■□□□□ 0.28
CSNK1D-217ENST00000581241 CYB5RLQ6IPT4 315 aa16.81■□□□□ 0.28
CSNK1D-217ENST00000581241 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.81■□□□□ 0.28
CSNK1D-217ENST00000581241 IFIT1P09914 478 aaKnown RBP16.8■□□□□ 0.28
CSNK1D-217ENST00000581241 KRT222Q8N1A0 295 aa16.8■□□□□ 0.28
CSNK1D-217ENST00000581241 EVI5LQ96CN4 794 aa16.8■□□□□ 0.28
CSNK1D-217ENST00000581241 CCDC175P0C221 793 aa16.8■□□□□ 0.28
CSNK1D-217ENST00000581241 CLCN1P35523 988 aa16.8■□□□□ 0.28
CSNK1D-217ENST00000581241 ZNF287Q9HBT7 754 aa16.8■□□□□ 0.28
CSNK1D-217ENST00000581241 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
CSNK1D-217ENST00000581241 PRG4Q92954 1404 aaPredicted RBP16.8■□□□□ 0.28
CSNK1D-217ENST00000581241 TAOK3Q9H2K8 898 aa16.8■□□□□ 0.28
CSNK1D-217ENST00000581241 STAMBPO95630 424 aa16.8■□□□□ 0.28
CSNK1D-217ENST00000581241 MCM10Q7L590 875 aa16.8■□□□□ 0.28
CSNK1D-217ENST00000581241 RBM5P52756 815 aaKnown RBP eCLIP16.79■□□□□ 0.281e-8■■□□□ 12.4
CSNK1D-217ENST00000581241 OSCARQ8IYS5 282 aa16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 GDPD2Q9HCC8 539 aa16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 GOLGA8AA7E2F4 631 aa16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 GOLGA8BA8MQT2 603 aa16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 TOM1L2Q6ZVM7 507 aa16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 FAM114A1Q8IWE2 563 aa16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 TTC22Q5TAA0 569 aa16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 KLHL34Q8N239 644 aa16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 HSF2BPO75031 334 aa16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 DDX54Q8TDD1 881 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 NAIPQ13075 1403 aa16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 ZNF213O14771 459 aa16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 TMEM266Q2M3C6 531 aa16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 LARP1Q6PKG0 1096 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-217ENST00000581241 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 TDRD12Q587J7 1177 aaKnown RBP16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 FAM135AQ9P2D6 1515 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 TNIP1Q15025 636 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 GSTTP1A0A1W2PQM5 241 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 KIF20AO95235 890 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 PYM1Q9BRP8 204 aaKnown RBP16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 NAPBQ9H115 298 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 KANK3Q6NY19 840 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 MAATS1Q7Z4T9 603 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 MYD88Q99836 296 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 PRXQ9BXM0 1461 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 NF2P35240 595 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 SPECC1LQ69YQ0 1117 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 EHBP1Q8NDI1 1231 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 RAB34Q9BZG1 259 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 SLC52A1Q9NWF4 448 aa16.78■□□□□ 0.28
CSNK1D-217ENST00000581241 CCDC12Q8WUD4 166 aaPredicted RBP16.77■□□□□ 0.28
CSNK1D-217ENST00000581241 THUMPD2Q9BTF0 503 aaKnown RBP16.77■□□□□ 0.28
CSNK1D-217ENST00000581241 NCOA1Q15788 1441 aa16.77■□□□□ 0.28
CSNK1D-217ENST00000581241 DNA2P51530 1060 aa16.77■□□□□ 0.28
CSNK1D-217ENST00000581241 TRIM27P14373 513 aa16.77■□□□□ 0.28
CSNK1D-217ENST00000581241 ZNF165P49910 485 aa16.77■□□□□ 0.28
CSNK1D-217ENST00000581241 PCF11O94913 1555 aaKnown RBP16.77■□□□□ 0.27
CSNK1D-217ENST00000581241 A0A087WZG4 1122 aa16.77■□□□□ 0.27
CSNK1D-217ENST00000581241 TRIM21P19474 475 aaKnown RBP16.77■□□□□ 0.27
CSNK1D-217ENST00000581241 MTIF2P46199 727 aaKnown RBP16.77■□□□□ 0.27
CSNK1D-217ENST00000581241 CKAP4Q07065 602 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms