RNA–Protein interactions for RNA: ENST00000581029.5

GAPLINC-203, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-203ENST00000581029 RRP1P56182 461 aaKnown RBP11.64□□□□□ -0.55
GAPLINC-203ENST00000581029 AAMPQ13685 434 aa11.64□□□□□ -0.55
GAPLINC-203ENST00000581029 PDE3AQ14432 1141 aa11.64□□□□□ -0.55
GAPLINC-203ENST00000581029 ZKSCAN2Q63HK3 967 aa11.64□□□□□ -0.55
GAPLINC-203ENST00000581029 TSPYL6Q8N831 410 aa11.64□□□□□ -0.55
GAPLINC-203ENST00000581029 SSH1Q8WYL5 1049 aa11.64□□□□□ -0.55
GAPLINC-203ENST00000581029 RBM42Q9BTD8 480 aaKnown RBP11.64□□□□□ -0.55
GAPLINC-203ENST00000581029 DDX21Q9NR30 783 aaKnown RBP eCLIP11.64□□□□□ -0.55
GAPLINC-203ENST00000581029 ASAP1Q9ULH1 1129 aa11.64□□□□□ -0.55
GAPLINC-203ENST00000581029 SUPT16HQ9Y5B9 1047 aaKnown RBP11.64□□□□□ -0.55
GAPLINC-203ENST00000581029 SBF2Q86WG5 1849 aa11.63□□□□□ -0.55
GAPLINC-203ENST00000581029 LOC102724428A0A0B4J2F2 783 aa11.63□□□□□ -0.55
GAPLINC-203ENST00000581029 KCNQ3O43525 872 aa11.63□□□□□ -0.55
GAPLINC-203ENST00000581029 PTCD1O75127 700 aaKnown RBP11.63□□□□□ -0.55
GAPLINC-203ENST00000581029 EIF2S2P20042 333 aaKnown RBP11.63□□□□□ -0.55
GAPLINC-203ENST00000581029 SIK1P57059 783 aa11.63□□□□□ -0.55
GAPLINC-203ENST00000581029 SF3B2Q13435 895 aaKnown RBP11.63□□□□□ -0.55
GAPLINC-203ENST00000581029 SLC27A3Q5K4L6 730 aa11.63□□□□□ -0.55
GAPLINC-203ENST00000581029 CCDC125Q86Z20 511 aa11.63□□□□□ -0.55
GAPLINC-203ENST00000581029 KCPQ6ZWJ8 1503 aa11.63□□□□□ -0.55
GAPLINC-203ENST00000581029 LAMB4A4D0S4 1761 aa11.63□□□□□ -0.55
GAPLINC-203ENST00000581029 CICQ96RK0 1608 aaPredicted RBP11.63□□□□□ -0.55
GAPLINC-203ENST00000581029 PLSCR1O15162 318 aa11.62□□□□□ -0.55
GAPLINC-203ENST00000581029 ATP6V1AP38606 617 aa11.62□□□□□ -0.55
GAPLINC-203ENST00000581029 ATF7IPQ6VMQ6 1270 aa11.62□□□□□ -0.55
GAPLINC-203ENST00000581029 FTSJ3Q8IY81 847 aaKnown RBP11.62□□□□□ -0.55
GAPLINC-203ENST00000581029 MRPL50Q8N5N7 158 aaKnown RBP11.62□□□□□ -0.55
GAPLINC-203ENST00000581029 KCNQ2O43526 872 aa11.61□□□□□ -0.55
GAPLINC-203ENST00000581029 BTAF1O14981 1849 aa11.6□□□□□ -0.55
GAPLINC-203ENST00000581029 BCAR3O75815 825 aa11.6□□□□□ -0.55
GAPLINC-203ENST00000581029 KRT24Q2M2I5 525 aa11.6□□□□□ -0.55
GAPLINC-203ENST00000581029 RC3H1Q5TC82 1133 aaKnown RBP11.6□□□□□ -0.55
GAPLINC-203ENST00000581029 DZIP1LQ8IYY4 767 aaKnown RBP11.6□□□□□ -0.55
GAPLINC-203ENST00000581029 FRAT1Q92837 279 aaPredicted RBP11.6□□□□□ -0.55
GAPLINC-203ENST00000581029 HDAC5Q9UQL6 1122 aa11.6□□□□□ -0.55
GAPLINC-203ENST00000581029 A0A087WZG4 1122 aa11.59□□□□□ -0.55
GAPLINC-203ENST00000581029 RGL2O15211 777 aa11.59□□□□□ -0.55
GAPLINC-203ENST00000581029 TRIM37O94972 964 aa11.59□□□□□ -0.55
GAPLINC-203ENST00000581029 IL6STP40189 918 aaPredicted RBP11.59□□□□□ -0.55
GAPLINC-203ENST00000581029 FLIIQ13045 1269 aa11.59□□□□□ -0.55
GAPLINC-203ENST00000581029 CHPF2Q9P2E5 772 aa11.59□□□□□ -0.55
GAPLINC-203ENST00000581029 CCNL1Q9UK58 526 aaPredicted RBP11.59□□□□□ -0.55
GAPLINC-203ENST00000581029 NOB1Q9ULX3 412 aaKnown RBP11.59□□□□□ -0.55
GAPLINC-203ENST00000581029 USP16Q9Y5T5 823 aa11.59□□□□□ -0.55
GAPLINC-203ENST00000581029 CYP19A1P11511 503 aaPredicted RBP11.58□□□□□ -0.56
GAPLINC-203ENST00000581029 CCT4P50991 539 aaKnown RBP11.58□□□□□ -0.56
GAPLINC-203ENST00000581029 FKBP5Q13451 457 aaPredicted RBP11.58□□□□□ -0.56
GAPLINC-203ENST00000581029 DNAJC10Q8IXB1 793 aa11.58□□□□□ -0.56
GAPLINC-203ENST00000581029 CNTNAP4Q9C0A0 1308 aa11.58□□□□□ -0.56
GAPLINC-203ENST00000581029 LY75O60449 1722 aa11.57□□□□□ -0.56
GAPLINC-203ENST00000581029 RGPD3A6NKT7 1758 aaPredicted RBP11.57□□□□□ -0.56
GAPLINC-203ENST00000581029 RGPD4Q7Z3J3 1758 aa11.57□□□□□ -0.56
GAPLINC-203ENST00000581029 APBA3O96018 575 aa11.57□□□□□ -0.56
GAPLINC-203ENST00000581029 BAG6P46379 1132 aa11.57□□□□□ -0.56
GAPLINC-203ENST00000581029 NEXNQ0ZGT2 675 aa11.57□□□□□ -0.56
GAPLINC-203ENST00000581029 FAM182BQ5T319 152 aa11.57□□□□□ -0.56
GAPLINC-203ENST00000581029 KIF6Q6ZMV9 814 aa11.57□□□□□ -0.56
GAPLINC-203ENST00000581029 BCL2L13Q9BXK5 485 aa11.57□□□□□ -0.56
GAPLINC-203ENST00000581029 CCDC87Q9NVE4 849 aa11.57□□□□□ -0.56
GAPLINC-203ENST00000581029 DDX19BQ9UMR2 479 aa11.57□□□□□ -0.56
GAPLINC-203ENST00000581029 MYCNP04198 464 aaPredicted RBP11.56□□□□□ -0.56
GAPLINC-203ENST00000581029 TRIM27P14373 513 aa11.56□□□□□ -0.56
GAPLINC-203ENST00000581029 HSP90AB3PQ58FF7 597 aa11.56□□□□□ -0.56
GAPLINC-203ENST00000581029 KSR2Q6VAB6 950 aa11.56□□□□□ -0.56
GAPLINC-203ENST00000581029 NECTIN2Q92692 538 aa11.56□□□□□ -0.56
GAPLINC-203ENST00000581029 PXDNLA1KZ92 1463 aa11.56□□□□□ -0.56
GAPLINC-203ENST00000581029 C5P01031 1676 aa11.55□□□□□ -0.56
GAPLINC-203ENST00000581029 IBTKQ9P2D0 1353 aaPredicted RBP11.55□□□□□ -0.56
GAPLINC-203ENST00000581029 ANKRD13DQ6ZTN6 518 aa11.55□□□□□ -0.56
GAPLINC-203ENST00000581029 FLAD1Q8NFF5 587 aa11.55□□□□□ -0.56
GAPLINC-203ENST00000581029 PLBD2Q8NHP8 589 aa11.55□□□□□ -0.56
GAPLINC-203ENST00000581029 TJP1Q07157 1748 aa11.55□□□□□ -0.56
GAPLINC-203ENST00000581029 PRAMEF22A3QJZ6 481 aa11.54□□□□□ -0.56
GAPLINC-203ENST00000581029 ERVV-1B6SEH8 477 aa11.54□□□□□ -0.56
GAPLINC-203ENST00000581029 A1BGP04217 495 aa11.54□□□□□ -0.56
GAPLINC-203ENST00000581029 MYL6BP14649 208 aa11.54□□□□□ -0.56
GAPLINC-203ENST00000581029 CRKLP46109 303 aaKnown RBP11.54□□□□□ -0.56
GAPLINC-203ENST00000581029 PDIA6Q15084 440 aa11.54□□□□□ -0.56
GAPLINC-203ENST00000581029 INTS3Q68E01 1043 aaKnown RBP11.54□□□□□ -0.56
GAPLINC-203ENST00000581029 COPS6Q7L5N1 327 aa11.54□□□□□ -0.56
GAPLINC-203ENST00000581029 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
GAPLINC-203ENST00000581029 DNAAF4Q8WXU2 420 aa11.54□□□□□ -0.56
GAPLINC-203ENST00000581029 ZNF652Q9Y2D9 606 aa11.54□□□□□ -0.56
GAPLINC-203ENST00000581029 RTCBQ9Y3I0 505 aaKnown RBP11.54□□□□□ -0.56
GAPLINC-203ENST00000581029 ABCC4O15439 1325 aa11.54□□□□□ -0.56
GAPLINC-203ENST00000581029 TCERG1O14776 1098 aaKnown RBP11.53□□□□□ -0.56
GAPLINC-203ENST00000581029 RPS6KA4O75676 772 aa11.53□□□□□ -0.56
GAPLINC-203ENST00000581029 ALDH1L1O75891 902 aa11.53□□□□□ -0.56
GAPLINC-203ENST00000581029 MVPQ14764 893 aaKnown RBP11.53□□□□□ -0.56
GAPLINC-203ENST00000581029 TXNRD1Q16881 649 aa11.53□□□□□ -0.56
GAPLINC-203ENST00000581029 SAMD1Q6SPF0 538 aaPredicted RBP11.53□□□□□ -0.56
GAPLINC-203ENST00000581029 XAGE3Q8WTP9 111 aa11.53□□□□□ -0.56
GAPLINC-203ENST00000581029 AK7Q96M32 723 aa11.53□□□□□ -0.56
GAPLINC-203ENST00000581029 SLC4A9Q96Q91 983 aa11.53□□□□□ -0.56
GAPLINC-203ENST00000581029 ATP10DQ9P241 1426 aa11.52□□□□□ -0.56
GAPLINC-203ENST00000581029 COL5A3P25940 1745 aaPredicted RBP11.52□□□□□ -0.56
GAPLINC-203ENST00000581029 PLIN1O60240 522 aa11.52□□□□□ -0.57
GAPLINC-203ENST00000581029 CAPN15O75808 1086 aa11.52□□□□□ -0.57
GAPLINC-203ENST00000581029 GNAI3P08754 354 aa11.52□□□□□ -0.57
GAPLINC-203ENST00000581029 EIF5P55010 431 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms