RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 CC2D1BQ5T0F9 858 aaKnown RBP8.48□□□□□ -1.05
PTPRM-213ENST00000580949 SIRT1Q96EB6 747 aa8.48□□□□□ -1.05
PTPRM-213ENST00000580949 PUS7Q96PZ0 661 aaKnown RBP8.48□□□□□ -1.05
PTPRM-213ENST00000580949 SLC26A8Q96RN1 970 aa8.48□□□□□ -1.05
PTPRM-213ENST00000580949 MRS2Q9HD23 443 aa8.48□□□□□ -1.05
PTPRM-213ENST00000580949 EID1Q9Y6B2 187 aa8.48□□□□□ -1.05
PTPRM-213ENST00000580949 MED14O60244 1454 aa8.48□□□□□ -1.05
PTPRM-213ENST00000580949 RIMS1Q86UR5 1692 aaKnown RBP8.48□□□□□ -1.05
PTPRM-213ENST00000580949 TULP4Q9NRJ4 1543 aa8.48□□□□□ -1.05
PTPRM-213ENST00000580949 EVC2Q86UK5 1308 aa8.48□□□□□ -1.05
PTPRM-213ENST00000580949 PARD3Q8TEW0 1356 aa8.48□□□□□ -1.05
PTPRM-213ENST00000580949 CENPBP07199 599 aaPredicted RBP8.47□□□□□ -1.05
PTPRM-213ENST00000580949 TMEM259Q4ZIN3 620 aa8.47□□□□□ -1.05
PTPRM-213ENST00000580949 NUDT12Q9BQG2 462 aa8.47□□□□□ -1.05
PTPRM-213ENST00000580949 TBX22Q9Y458 520 aa8.47□□□□□ -1.05
PTPRM-213ENST00000580949 SETD1AO15047 1707 aaKnown RBP8.46□□□□□ -1.05
PTPRM-213ENST00000580949 ARHGEF28Q8N1W1 1705 aaKnown RBP8.46□□□□□ -1.05
PTPRM-213ENST00000580949 CCNYL3P0C7X3 344 aa8.46□□□□□ -1.06
PTPRM-213ENST00000580949 TMC1Q8TDI8 760 aa8.46□□□□□ -1.06
PTPRM-213ENST00000580949 TSC1Q92574 1164 aa8.46□□□□□ -1.06
PTPRM-213ENST00000580949 CDK19Q9BWU1 502 aa8.46□□□□□ -1.06
PTPRM-213ENST00000580949 KNSTRNQ9Y448 316 aa8.46□□□□□ -1.06
PTPRM-213ENST00000580949 KTN1Q86UP2 1357 aaKnown RBP8.46□□□□□ -1.06
PTPRM-213ENST00000580949 ROBO2Q9HCK4 1378 aa8.46□□□□□ -1.06
PTPRM-213ENST00000580949 PTPRUQ92729 1446 aa8.46□□□□□ -1.06
PTPRM-213ENST00000580949 DLC1Q96QB1 1528 aa8.45□□□□□ -1.06
PTPRM-213ENST00000580949 QRICH2Q9H0J4 1663 aa8.45□□□□□ -1.06
PTPRM-213ENST00000580949 MYBBP1AQ9BQG0 1328 aaKnown RBP8.45□□□□□ -1.06
PTPRM-213ENST00000580949 TECPR2O15040 1411 aa8.45□□□□□ -1.06
PTPRM-213ENST00000580949 CEP170BQ9Y4F5 1589 aaPredicted RBP8.44□□□□□ -1.06
PTPRM-213ENST00000580949 MYOM1P52179 1685 aa8.44□□□□□ -1.06
PTPRM-213ENST00000580949 AP1G2O75843 785 aa8.44□□□□□ -1.06
PTPRM-213ENST00000580949 SRPK2P78362 688 aaKnown RBP8.44□□□□□ -1.06
PTPRM-213ENST00000580949 CTDSPL2Q05D32 466 aa8.44□□□□□ -1.06
PTPRM-213ENST00000580949 PLA2G2CQ5R387 149 aa8.44□□□□□ -1.06
PTPRM-213ENST00000580949 FAM9BQ8IZU0 186 aa8.44□□□□□ -1.06
PTPRM-213ENST00000580949 PNISRQ8TF01 805 aaKnown RBP8.44□□□□□ -1.06
PTPRM-213ENST00000580949 EVA1BQ9NVM1 165 aa8.44□□□□□ -1.06
PTPRM-213ENST00000580949 AMOTL2Q9Y2J4 779 aa8.44□□□□□ -1.06
PTPRM-213ENST00000580949 NPC1L1Q9UHC9 1359 aa8.44□□□□□ -1.06
PTPRM-213ENST00000580949 FAM135BQ49AJ0 1406 aa8.44□□□□□ -1.06
PTPRM-213ENST00000580949 RPIAP49247 311 aa8.43□□□□□ -1.06
PTPRM-213ENST00000580949 ANKLE2Q86XL3 938 aa8.43□□□□□ -1.06
PTPRM-213ENST00000580949 CCDC24Q8N4L8 307 aa8.43□□□□□ -1.06
PTPRM-213ENST00000580949 BANK1Q8NDB2 785 aa8.43□□□□□ -1.06
PTPRM-213ENST00000580949 V9GY48 417 aaPredicted RBP8.43□□□□□ -1.06
PTPRM-213ENST00000580949 WASLO00401 505 aaPredicted RBP8.42□□□□□ -1.06
PTPRM-213ENST00000580949 F12P00748 615 aaPredicted RBP8.42□□□□□ -1.06
PTPRM-213ENST00000580949 USP17L8P0C7I0 530 aa8.42□□□□□ -1.06
PTPRM-213ENST00000580949 PPP2R1AP30153 589 aa8.42□□□□□ -1.06
PTPRM-213ENST00000580949 KCNH2Q12809 1159 aa8.42□□□□□ -1.06
PTPRM-213ENST00000580949 NLRP13Q86W25 1043 aa8.42□□□□□ -1.06
PTPRM-213ENST00000580949 ARXQ96QS3 562 aa8.42□□□□□ -1.06
PTPRM-213ENST00000580949 CABP1Q9NZU7 370 aa8.42□□□□□ -1.06
PTPRM-213ENST00000580949 BRD4O60885 1362 aaPredicted RBP8.42□□□□□ -1.06
PTPRM-213ENST00000580949 ZBTB24O43167 697 aaPredicted RBP8.41□□□□□ -1.06
PTPRM-213ENST00000580949 SLC19A1P41440 591 aa8.41□□□□□ -1.06
PTPRM-213ENST00000580949 LIAT1Q6ZQX7 453 aa8.41□□□□□ -1.06
PTPRM-213ENST00000580949 EMID1Q96A84 441 aaPredicted RBP8.41□□□□□ -1.06
PTPRM-213ENST00000580949 PRKD2Q9BZL6 878 aa8.41□□□□□ -1.06
PTPRM-213ENST00000580949 NSD3Q9BZ95 1437 aa8.4□□□□□ -1.06
PTPRM-213ENST00000580949 ATAD2Q6PL18 1390 aa8.4□□□□□ -1.06
PTPRM-213ENST00000580949 ANKRD36BQ8N2N9 1353 aa8.4□□□□□ -1.06
PTPRM-213ENST00000580949 PRR36Q9H6K5 1346 aa8.4□□□□□ -1.06
PTPRM-213ENST00000580949 KCNA6P17658 529 aa8.4□□□□□ -1.06
PTPRM-213ENST00000580949 HNRNPUQ00839 825 aaKnown RBP eCLIP8.4□□□□□ -1.06
PTPRM-213ENST00000580949 LRRN4Q8WUT4 740 aa8.4□□□□□ -1.06
PTPRM-213ENST00000580949 NUDT16Q96DE0 195 aaKnown RBP8.4□□□□□ -1.06
PTPRM-213ENST00000580949 CPS1P31327 1500 aa8.39□□□□□ -1.07
PTPRM-213ENST00000580949 CD163L1Q9NR16 1453 aa8.39□□□□□ -1.07
PTPRM-213ENST00000580949 A0A1W2PP64 1363 aa8.39□□□□□ -1.07
PTPRM-213ENST00000580949 CTHP32929 405 aa8.39□□□□□ -1.07
PTPRM-213ENST00000580949 PTCRAQ6ISU1 281 aaPredicted RBP8.39□□□□□ -1.07
PTPRM-213ENST00000580949 NINLQ9Y2I6 1382 aa8.38□□□□□ -1.07
PTPRM-213ENST00000580949 ZNF142P52746 1687 aaPredicted RBP8.38□□□□□ -1.07
PTPRM-213ENST00000580949 SOCS7O14512 581 aa8.38□□□□□ -1.07
PTPRM-213ENST00000580949 CD2BP2O95400 341 aaKnown RBP8.38□□□□□ -1.07
PTPRM-213ENST00000580949 SPRYD7Q5W111 196 aa8.38□□□□□ -1.07
PTPRM-213ENST00000580949 UNC93B1Q9H1C4 597 aa8.38□□□□□ -1.07
PTPRM-213ENST00000580949 TERF2IPQ9NYB0 399 aa8.38□□□□□ -1.07
PTPRM-213ENST00000580949 MAP10Q9P2G4 905 aa8.38□□□□□ -1.07
PTPRM-213ENST00000580949 SETD1BQ9UPS6 1966 aaKnown RBP8.38□□□□□ -1.07
PTPRM-213ENST00000580949 NPHP4O75161 1426 aaPredicted RBP8.37□□□□□ -1.07
PTPRM-213ENST00000580949 PIK3R4Q99570 1358 aa8.37□□□□□ -1.07
PTPRM-213ENST00000580949 CGNL1Q0VF96 1302 aa8.37□□□□□ -1.07
PTPRM-213ENST00000580949 FYB1O15117 783 aa8.37□□□□□ -1.07
PTPRM-213ENST00000580949 TRIM32Q13049 653 aa8.37□□□□□ -1.07
PTPRM-213ENST00000580949 MORC1Q86VD1 984 aa8.37□□□□□ -1.07
PTPRM-213ENST00000580949 KNDC1Q76NI1 1749 aa8.37□□□□□ -1.07
PTPRM-213ENST00000580949 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.37□□□□□ -1.07
PTPRM-213ENST00000580949 PTCH1Q13635 1447 aa8.37□□□□□ -1.07
PTPRM-213ENST00000580949 DIP2AQ14689 1571 aa8.36□□□□□ -1.07
PTPRM-213ENST00000580949 SENP3-EIF4A1A0A087X0R7 540 aa8.36□□□□□ -1.07
PTPRM-213ENST00000580949 TNNT2P45379 298 aaPredicted RBP8.36□□□□□ -1.07
PTPRM-213ENST00000580949 HDGFL2Q7Z4V5 671 aaPredicted RBP8.36□□□□□ -1.07
PTPRM-213ENST00000580949 CPSF1Q10570 1443 aaKnown RBP8.36□□□□□ -1.07
PTPRM-213ENST00000580949 HSPA2P54652 639 aa8.35□□□□□ -1.07
PTPRM-213ENST00000580949 ZNF598Q86UK7 904 aaKnown RBP8.35□□□□□ -1.07
PTPRM-213ENST00000580949 ARMC2Q8NEN0 867 aa8.35□□□□□ -1.07
PTPRM-213ENST00000580949 GGNBP2Q9H3C7 697 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms