RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 MSL1Q68DK7 614 aa22.98■■□□□ 1.27
EIF4A1-216ENST00000580888 NLGN2Q8NFZ4 835 aa22.98■■□□□ 1.27
EIF4A1-216ENST00000580888 C1orf141Q5JVX7 400 aa22.97■■□□□ 1.27
EIF4A1-216ENST00000580888 KLHL34Q8N239 644 aa22.97■■□□□ 1.27
EIF4A1-216ENST00000580888 SLC4A9Q96Q91 983 aa22.97■■□□□ 1.27
EIF4A1-216ENST00000580888 BCAR3O75815 825 aa22.96■■□□□ 1.27
EIF4A1-216ENST00000580888 B4GALNT3Q6L9W6 998 aa22.96■■□□□ 1.27
EIF4A1-216ENST00000580888 CABP4P57796 275 aa22.95■■□□□ 1.26
EIF4A1-216ENST00000580888 IFT57Q9NWB7 429 aa22.95■■□□□ 1.26
EIF4A1-216ENST00000580888 CD2APQ9Y5K6 639 aa22.95■■□□□ 1.26
EIF4A1-216ENST00000580888 TJP1Q07157 1748 aa22.94■■□□□ 1.26
EIF4A1-216ENST00000580888 MRC1P22897 1456 aa22.94■■□□□ 1.26
EIF4A1-216ENST00000580888 GNPATO15228 680 aa22.94■■□□□ 1.26
EIF4A1-216ENST00000580888 PHF14O94880 888 aa22.94■■□□□ 1.26
EIF4A1-216ENST00000580888 PDE3AQ14432 1141 aa22.94■■□□□ 1.26
EIF4A1-216ENST00000580888 GPR162Q16538 588 aa22.94■■□□□ 1.26
EIF4A1-216ENST00000580888 RC3H1Q5TC82 1133 aaKnown RBP22.94■■□□□ 1.26
EIF4A1-216ENST00000580888 C20orf194Q5TEA3 1177 aa22.94■■□□□ 1.26
EIF4A1-216ENST00000580888 CRBNQ96SW2 442 aa22.94■■□□□ 1.26
EIF4A1-216ENST00000580888 CNTNAP4Q9C0A0 1308 aa22.93■■□□□ 1.26
EIF4A1-216ENST00000580888 EXOSC9Q06265 439 aaKnown RBP22.93■■□□□ 1.26
EIF4A1-216ENST00000580888 AKAP4Q5JQC9 854 aa22.93■■□□□ 1.26
EIF4A1-216ENST00000580888 TSR2Q969E8 191 aaKnown RBP22.93■■□□□ 1.26
EIF4A1-216ENST00000580888 KIF13BQ9NQT8 1826 aa22.93■■□□□ 1.26
EIF4A1-216ENST00000580888 C4AP0C0L4 1744 aa22.93■■□□□ 1.26
EIF4A1-216ENST00000580888 GNAI1P63096 354 aa22.92■■□□□ 1.26
EIF4A1-216ENST00000580888 SMIM5Q71RC9 77 aa22.92■■□□□ 1.26
EIF4A1-216ENST00000580888 ZNF428Q96B54 188 aa22.91■■□□□ 1.26
EIF4A1-216ENST00000580888 RBM42Q9BTD8 480 aaKnown RBP22.91■■□□□ 1.26
EIF4A1-216ENST00000580888 ADRA2BP18089 450 aa22.9■■□□□ 1.26
EIF4A1-216ENST00000580888 NFATC2IPQ8NCF5 419 aa22.9■■□□□ 1.26
EIF4A1-216ENST00000580888 CCDC136Q96JN2 1154 aa22.9■■□□□ 1.26
EIF4A1-216ENST00000580888 CFAP44Q96MT7 982 aa22.9■■□□□ 1.26
EIF4A1-216ENST00000580888 HTATSF1O43719 755 aaKnown RBP22.89■■□□□ 1.25
EIF4A1-216ENST00000580888 ZNF784Q8NCA9 323 aaPredicted RBP22.89■■□□□ 1.25
EIF4A1-216ENST00000580888 RTCBQ9Y3I0 505 aaKnown RBP22.89■■□□□ 1.25
EIF4A1-216ENST00000580888 BRPF1P55201 1214 aaPredicted RBP22.88■■□□□ 1.25
EIF4A1-216ENST00000580888 GRIN3BO60391 1043 aa22.87■■□□□ 1.25
EIF4A1-216ENST00000580888 RPS6KA4O75676 772 aa22.87■■□□□ 1.25
EIF4A1-216ENST00000580888 YBX3P16989 372 aaKnown RBP eCLIP22.87■■□□□ 1.255e-10■□□□□ 9.9
EIF4A1-216ENST00000580888 MTHFSDQ2M296 383 aaKnown RBP22.87■■□□□ 1.25
EIF4A1-216ENST00000580888 TRAPPC3LQ5T215 181 aa22.87■■□□□ 1.25
EIF4A1-216ENST00000580888 GAS2L2Q8NHY3 880 aa22.87■■□□□ 1.25
EIF4A1-216ENST00000580888 UBR2Q8IWV8 1755 aa22.86■■□□□ 1.25
EIF4A1-216ENST00000580888 KIAA1551Q9HCM1 1747 aa22.86■■□□□ 1.25
EIF4A1-216ENST00000580888 ALDH1L2Q3SY69 923 aa22.86■■□□□ 1.25
EIF4A1-216ENST00000580888 THUMPD2Q9BTF0 503 aaKnown RBP22.86■■□□□ 1.25
EIF4A1-216ENST00000580888 SLC52A2Q9HAB3 445 aa22.86■■□□□ 1.25
EIF4A1-216ENST00000580888 SIPA1L3O60292 1781 aaPredicted RBP22.84■■□□□ 1.25
EIF4A1-216ENST00000580888 CHL1O00533 1208 aa22.84■■□□□ 1.25
EIF4A1-216ENST00000580888 RNMTO43148 476 aaKnown RBP22.84■■□□□ 1.25
EIF4A1-216ENST00000580888 ARHGEF1Q92888 912 aaKnown RBP22.84■■□□□ 1.25
EIF4A1-216ENST00000580888 LGR6Q9HBX8 967 aa22.84■■□□□ 1.25
EIF4A1-216ENST00000580888 MBIPQ9NS73 344 aa22.84■■□□□ 1.25
EIF4A1-216ENST00000580888 PTCD1O75127 700 aaKnown RBP22.83■■□□□ 1.25
EIF4A1-216ENST00000580888 NLGN1Q8N2Q7 840 aa22.83■■□□□ 1.25
EIF4A1-216ENST00000580888 KCPQ6ZWJ8 1503 aa22.82■■□□□ 1.24
EIF4A1-216ENST00000580888 VAMP4O75379 141 aa22.82■■□□□ 1.24
EIF4A1-216ENST00000580888 CRKLP46109 303 aaKnown RBP22.81■■□□□ 1.24
EIF4A1-216ENST00000580888 AAMPQ13685 434 aa22.81■■□□□ 1.24
EIF4A1-216ENST00000580888 SSH1Q8WYL5 1049 aa22.81■■□□□ 1.24
EIF4A1-216ENST00000580888 MMP10P09238 476 aa22.8■■□□□ 1.24
EIF4A1-216ENST00000580888 GYS1P13807 737 aa22.8■■□□□ 1.24
EIF4A1-216ENST00000580888 DCTN1Q14203 1278 aa22.8■■□□□ 1.24
EIF4A1-216ENST00000580888 BRCA1P38398 1863 aaKnown RBP22.79■■□□□ 1.24
EIF4A1-216ENST00000580888 N4BP2Q86UW6 1770 aaPredicted RBP22.78■■□□□ 1.24
EIF4A1-216ENST00000580888 MS4A1P11836 297 aa22.78■■□□□ 1.24
EIF4A1-216ENST00000580888 RFC4P35249 363 aa22.78■■□□□ 1.24
EIF4A1-216ENST00000580888 C10orf71Q711Q0 1435 aa22.78■■□□□ 1.24
EIF4A1-216ENST00000580888 ZKSCAN2Q63HK3 967 aa22.77■■□□□ 1.24
EIF4A1-216ENST00000580888 INTS5Q6P9B9 1019 aaKnown RBP22.77■■□□□ 1.24
EIF4A1-216ENST00000580888 TSHZ2Q9NRE2 1034 aa22.77■■□□□ 1.24
EIF4A1-216ENST00000580888 MCM10Q7L590 875 aa22.76■■□□□ 1.23
EIF4A1-216ENST00000580888 VSIG10Q8N0Z9 540 aa22.76■■□□□ 1.23
EIF4A1-216ENST00000580888 BABAM1Q9NWV8 329 aa22.76■■□□□ 1.23
EIF4A1-216ENST00000580888 LAS1LQ9Y4W2 734 aaKnown RBP22.76■■□□□ 1.23
EIF4A1-216ENST00000580888 PXDNLA1KZ92 1463 aa22.76■■□□□ 1.23
EIF4A1-216ENST00000580888 GNAT3A8MTJ3 354 aa22.75■■□□□ 1.23
EIF4A1-216ENST00000580888 TSPYL6Q8N831 410 aa22.75■■□□□ 1.23
EIF4A1-216ENST00000580888 SMC4Q9NTJ3 1288 aa22.75■■□□□ 1.23
EIF4A1-216ENST00000580888 KDM2BQ8NHM5 1336 aa22.75■■□□□ 1.23
EIF4A1-216ENST00000580888 USP42Q9H9J4 1324 aaKnown RBP22.75■■□□□ 1.23
EIF4A1-216ENST00000580888 RLBP1P12271 317 aa22.74■■□□□ 1.23
EIF4A1-216ENST00000580888 SLC39A6Q13433 755 aa22.74■■□□□ 1.23
EIF4A1-216ENST00000580888 DNAJC10Q8IXB1 793 aa22.74■■□□□ 1.23
EIF4A1-216ENST00000580888 C8orf58Q8NAV2 365 aa22.74■■□□□ 1.23
EIF4A1-216ENST00000580888 PANK1Q8TE04 598 aa22.74■■□□□ 1.23
EIF4A1-216ENST00000580888 RTF1Q92541 710 aaKnown RBP22.74■■□□□ 1.23
EIF4A1-216ENST00000580888 BCL2L13Q9BXK5 485 aa22.74■■□□□ 1.23
EIF4A1-216ENST00000580888 KIF16BQ96L93 1317 aa22.74■■□□□ 1.23
EIF4A1-216ENST00000580888 CYP19A1P11511 503 aaPredicted RBP22.73■■□□□ 1.23
EIF4A1-216ENST00000580888 CANXP27824 592 aaKnown RBP22.73■■□□□ 1.23
EIF4A1-216ENST00000580888 TGFB2P61812 414 aa22.73■■□□□ 1.23
EIF4A1-216ENST00000580888 MRPL50Q8N5N7 158 aaKnown RBP22.73■■□□□ 1.23
EIF4A1-216ENST00000580888 ARHGAP45Q92619 1136 aa22.73■■□□□ 1.23
EIF4A1-216ENST00000580888 FRAT1Q92837 279 aaPredicted RBP22.73■■□□□ 1.23
EIF4A1-216ENST00000580888 CCDC87Q9NVE4 849 aa22.73■■□□□ 1.23
EIF4A1-216ENST00000580888 TWISTNBQ3B726 338 aaPredicted RBP22.72■■□□□ 1.23
EIF4A1-216ENST00000580888 ATF7IPQ6VMQ6 1270 aa22.72■■□□□ 1.23
EIF4A1-216ENST00000580888 SOS1Q07889 1333 aaPredicted RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms