RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 ZBTB1Q9Y2K1 713 aa28.06■■■□□ 2.08
SNX11-207ENST00000580875 COL15A1P39059 1388 aa28.06■■■□□ 2.08
SNX11-207ENST00000580875 VIRMAQ69YN4 1812 aaKnown RBP28.06■■■□□ 2.08
SNX11-207ENST00000580875 U2SURPO15042 1029 aaKnown RBP28.04■■■□□ 2.08
SNX11-207ENST00000580875 CNGB1Q14028 1251 aaPredicted RBP28.04■■■□□ 2.08
SNX11-207ENST00000580875 TTC5Q8N0Z6 440 aa28.04■■■□□ 2.08
SNX11-207ENST00000580875 ARFGEF1Q9Y6D6 1849 aa28.04■■■□□ 2.08
SNX11-207ENST00000580875 CHRNA5P30532 468 aa28.03■■■□□ 2.08
SNX11-207ENST00000580875 NFIXQ14938 502 aa28.02■■■□□ 2.08
SNX11-207ENST00000580875 C9orf131Q5VYM1 1079 aa28.01■■■□□ 2.07
SNX11-207ENST00000580875 GAS2L2Q8NHY3 880 aa28.01■■■□□ 2.07
SNX11-207ENST00000580875 UBR2Q8IWV8 1755 aa28.01■■■□□ 2.07
SNX11-207ENST00000580875 STARD3NLO95772 234 aa28■■■□□ 2.07
SNX11-207ENST00000580875 GNAT3A8MTJ3 354 aa27.99■■■□□ 2.07
SNX11-207ENST00000580875 CANXP27824 592 aaKnown RBP27.99■■■□□ 2.07
SNX11-207ENST00000580875 TEFQ10587 303 aa27.99■■■□□ 2.07
SNX11-207ENST00000580875 BCL2L12Q9HB09 334 aa27.99■■■□□ 2.07
SNX11-207ENST00000580875 TOMM70O94826 608 aa27.98■■■□□ 2.07
SNX11-207ENST00000580875 IL17REQ8NFR9 667 aa27.98■■■□□ 2.07
SNX11-207ENST00000580875 ZNF790Q6PG37 636 aa27.96■■■□□ 2.07
SNX11-207ENST00000580875 ZNF496Q96IT1 587 aaPredicted RBP27.96■■■□□ 2.07
SNX11-207ENST00000580875 NMRK2Q9NPI5 230 aa27.96■■■□□ 2.07
SNX11-207ENST00000580875 SERPINB2P05120 415 aa27.95■■■□□ 2.06
SNX11-207ENST00000580875 EIF5P55010 431 aaKnown RBP27.95■■■□□ 2.06
SNX11-207ENST00000580875 NRXN2Q9P2S2 1712 aa27.95■■■□□ 2.06
SNX11-207ENST00000580875 A0A087WZG4 1122 aa27.94■■■□□ 2.06
SNX11-207ENST00000580875 CFAP53Q96M91 514 aa27.94■■■□□ 2.06
SNX11-207ENST00000580875 TEX13AQ9BXU3 409 aaPredicted RBP27.94■■■□□ 2.06
SNX11-207ENST00000580875 RNF181Q9P0P0 153 aa27.94■■■□□ 2.06
SNX11-207ENST00000580875 HEG1Q9ULI3 1381 aa27.94■■■□□ 2.06
SNX11-207ENST00000580875 AFDNP55196 1824 aaKnown RBP27.92■■■□□ 2.06
SNX11-207ENST00000580875 CEMIPQ8WUJ3 1361 aa27.91■■■□□ 2.06
SNX11-207ENST00000580875 KDM2BQ8NHM5 1336 aa27.91■■■□□ 2.06
SNX11-207ENST00000580875 PRKAR2BP31323 418 aa27.9■■■□□ 2.06
SNX11-207ENST00000580875 APLP1P51693 650 aa27.9■■■□□ 2.06
SNX11-207ENST00000580875 FMNL2Q96PY5 1086 aa27.9■■■□□ 2.06
SNX11-207ENST00000580875 SIPA1L3O60292 1781 aaPredicted RBP27.9■■■□□ 2.06
SNX11-207ENST00000580875 BICDL1Q6ZP65 573 aa27.89■■■□□ 2.06
SNX11-207ENST00000580875 PHACTR3Q96KR7 559 aa27.89■■■□□ 2.06
SNX11-207ENST00000580875 RSPH6AQ9H0K4 717 aa27.89■■■□□ 2.06
SNX11-207ENST00000580875 C16orf71Q8IYS4 520 aaPredicted RBP27.88■■■□□ 2.05
SNX11-207ENST00000580875 TTLL6Q8N841 843 aa27.88■■■□□ 2.05
SNX11-207ENST00000580875 IL6STP40189 918 aaPredicted RBP27.87■■■□□ 2.05
SNX11-207ENST00000580875 C2CD5Q86YS7 1000 aa27.87■■■□□ 2.05
SNX11-207ENST00000580875 RBM46Q8TBY0 533 aaKnown RBP27.87■■■□□ 2.05
SNX11-207ENST00000580875 NUDCQ9Y266 331 aa27.87■■■□□ 2.05
SNX11-207ENST00000580875 ZNF330Q9Y3S2 320 aaPredicted RBP27.87■■■□□ 2.05
SNX11-207ENST00000580875 CARMIL3Q8ND23 1372 aa27.86■■■□□ 2.05
SNX11-207ENST00000580875 BTBD11A6QL63 1104 aa27.86■■■□□ 2.05
SNX11-207ENST00000580875 H0YIN7 160 aa27.86■■■□□ 2.05
SNX11-207ENST00000580875 TBC1D9BQ66K14 1250 aa27.86■■■□□ 2.05
SNX11-207ENST00000580875 RASSF7Q02833 373 aa27.85■■■□□ 2.05
SNX11-207ENST00000580875 DLEC1Q9Y238 1755 aa27.85■■■□□ 2.05
SNX11-207ENST00000580875 ZC3H4Q9UPT8 1303 aaKnown RBP27.85■■■□□ 2.05
SNX11-207ENST00000580875 NPM2Q86SE8 214 aaKnown RBP27.84■■■□□ 2.05
SNX11-207ENST00000580875 TBC1D2BQ9UPU7 963 aa27.84■■■□□ 2.05
SNX11-207ENST00000580875 SCN7AQ01118 1682 aa27.84■■■□□ 2.05
SNX11-207ENST00000580875 A1BGP04217 495 aa27.83■■■□□ 2.05
SNX11-207ENST00000580875 SBF1O95248 1867 aa27.83■■■□□ 2.04
SNX11-207ENST00000580875 KCNQ3O43525 872 aa27.82■■■□□ 2.04
SNX11-207ENST00000580875 U2AF1L5P0DN76 240 aaPredicted RBP27.82■■■□□ 2.04
SNX11-207ENST00000580875 LMNB1P20700 586 aa27.82■■■□□ 2.04
SNX11-207ENST00000580875 PPP2R1AP30153 589 aa27.82■■■□□ 2.04
SNX11-207ENST00000580875 U2AF1Q01081 240 aaKnown RBP eCLIP27.82■■■□□ 2.04
SNX11-207ENST00000580875 PDZRN3Q9UPQ7 1066 aa27.82■■■□□ 2.04
SNX11-207ENST00000580875 BRIP1Q9BX63 1249 aa27.81■■■□□ 2.04
SNX11-207ENST00000580875 RRAGCQ9HB90 399 aa27.81■■■□□ 2.04
SNX11-207ENST00000580875 PDE6BP35913 854 aa27.8■■■□□ 2.04
SNX11-207ENST00000580875 FSTL1Q12841 308 aa27.8■■■□□ 2.04
SNX11-207ENST00000580875 IFFO2Q5TF58 517 aa27.8■■■□□ 2.04
SNX11-207ENST00000580875 RTF1Q92541 710 aaKnown RBP27.8■■■□□ 2.04
SNX11-207ENST00000580875 PRR5LQ6MZQ0 368 aa27.79■■■□□ 2.04
SNX11-207ENST00000580875 TNRC6CQ9HCJ0 1690 aaKnown RBP27.78■■■□□ 2.04
SNX11-207ENST00000580875 CAMTA2O94983 1202 aa27.78■■■□□ 2.04
SNX11-207ENST00000580875 SETDB2Q96T68 719 aa27.78■■■□□ 2.04
SNX11-207ENST00000580875 PRELPP51888 382 aa27.77■■■□□ 2.04
SNX11-207ENST00000580875 MCM10Q7L590 875 aa27.77■■■□□ 2.04
SNX11-207ENST00000580875 DNAJC5GQ8N7S2 189 aa27.77■■■□□ 2.04
SNX11-207ENST00000580875 ZNF622Q969S3 477 aaKnown RBP eCLIP27.76■■■□□ 2.03
SNX11-207ENST00000580875 USP16Q9Y5T5 823 aa27.76■■■□□ 2.03
SNX11-207ENST00000580875 NFKBIEO00221 500 aa27.75■■■□□ 2.03
SNX11-207ENST00000580875 DZIP3Q86Y13 1208 aaKnown RBP27.75■■■□□ 2.03
SNX11-207ENST00000580875 CCDC24Q8N4L8 307 aa27.75■■■□□ 2.03
SNX11-207ENST00000580875 CNBD1Q8NA66 436 aa27.75■■■□□ 2.03
SNX11-207ENST00000580875 ANKRD31Q8N7Z5 1873 aa27.74■■■□□ 2.03
SNX11-207ENST00000580875 GLTPD2A6NH11 291 aa27.74■■■□□ 2.03
SNX11-207ENST00000580875 NPHP1O15259 732 aa27.74■■■□□ 2.03
SNX11-207ENST00000580875 SNRPA1P09661 255 aaKnown RBP27.74■■■□□ 2.03
SNX11-207ENST00000580875 HTATSF1O43719 755 aaKnown RBP27.73■■■□□ 2.03
SNX11-207ENST00000580875 PRAMEF22A3QJZ6 481 aa27.72■■■□□ 2.03
SNX11-207ENST00000580875 ST5P78524 1137 aa27.72■■■□□ 2.03
SNX11-207ENST00000580875 WDR90Q96KV7 1748 aa27.72■■■□□ 2.03
SNX11-207ENST00000580875 C21orf2O43822 256 aa27.71■■■□□ 2.03
SNX11-207ENST00000580875 PIP4K2AP48426 406 aaPredicted RBP27.71■■■□□ 2.03
SNX11-207ENST00000580875 SMC1BQ8NDV3 1235 aa27.71■■■□□ 2.03
SNX11-207ENST00000580875 BCORQ6W2J9 1755 aa27.71■■■□□ 2.03
SNX11-207ENST00000580875 VEGFAP15692 232 aaPredicted RBP27.7■■■□□ 2.02
SNX11-207ENST00000580875 DCTN1Q14203 1278 aa27.7■■■□□ 2.02
SNX11-207ENST00000580875 CLEC4GQ6UXB4 293 aa27.7■■■□□ 2.02
SNX11-207ENST00000580875 COL11A2P13942 1736 aaPredicted RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms