RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 PIM2Q9P1W9 311 aa10.99□□□□□ -0.65
SMARCE1-217ENST00000580654 ASAP1Q9ULH1 1129 aa10.99□□□□□ -0.65
SMARCE1-217ENST00000580654 ZNF831Q5JPB2 1677 aa10.98□□□□□ -0.65
SMARCE1-217ENST00000580654 POTECB2RU33 542 aa10.98□□□□□ -0.65
SMARCE1-217ENST00000580654 GYS1P13807 737 aa10.98□□□□□ -0.65
SMARCE1-217ENST00000580654 RRS1Q15050 365 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-217ENST00000580654 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
SMARCE1-217ENST00000580654 L3MBTL2Q969R5 705 aa10.98□□□□□ -0.65
SMARCE1-217ENST00000580654 KIF12Q96FN5 646 aa10.98□□□□□ -0.65
SMARCE1-217ENST00000580654 PRDM10Q9NQV6 1147 aa10.98□□□□□ -0.65
SMARCE1-217ENST00000580654 ROCK2O75116 1388 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-217ENST00000580654 KDRP35968 1356 aa10.98□□□□□ -0.65
SMARCE1-217ENST00000580654 VIRMAQ69YN4 1812 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-217ENST00000580654 MYH14Q7Z406 1995 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-217ENST00000580654 GLTPD2A6NH11 291 aa10.97□□□□□ -0.65
SMARCE1-217ENST00000580654 VEGFAP15692 232 aaPredicted RBP10.97□□□□□ -0.65
SMARCE1-217ENST00000580654 ATP6V1AP38606 617 aa10.97□□□□□ -0.65
SMARCE1-217ENST00000580654 RASSF7Q02833 373 aa10.97□□□□□ -0.65
SMARCE1-217ENST00000580654 DALRD3Q5D0E6 543 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-217ENST00000580654 TRAPPC3LQ5T215 181 aa10.97□□□□□ -0.65
SMARCE1-217ENST00000580654 ARHGEF1Q92888 912 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-217ENST00000580654 SLC4A9Q96Q91 983 aa10.97□□□□□ -0.65
SMARCE1-217ENST00000580654 MKRN1Q9UHC7 482 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-217ENST00000580654 ZC3H4Q9UPT8 1303 aaKnown RBP10.96□□□□□ -0.65
SMARCE1-217ENST00000580654 CHRNA5P30532 468 aa10.96□□□□□ -0.65
SMARCE1-217ENST00000580654 COG3Q96JB2 828 aa10.96□□□□□ -0.65
SMARCE1-217ENST00000580654 TERF2IPQ9NYB0 399 aa10.96□□□□□ -0.65
SMARCE1-217ENST00000580654 PARP3Q9Y6F1 533 aa10.96□□□□□ -0.65
SMARCE1-217ENST00000580654 NCAPD2Q15021 1401 aa10.95□□□□□ -0.66
SMARCE1-217ENST00000580654 DDR1Q08345 913 aa10.95□□□□□ -0.66
SMARCE1-217ENST00000580654 HSP90AB2PQ58FF8 381 aa10.95□□□□□ -0.66
SMARCE1-217ENST00000580654 ATG3Q9NT62 314 aa10.95□□□□□ -0.66
SMARCE1-217ENST00000580654 RTCBQ9Y3I0 505 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-217ENST00000580654 DLEC1Q9Y238 1755 aa10.95□□□□□ -0.66
SMARCE1-217ENST00000580654 SMG6Q86US8 1419 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-217ENST00000580654 TIE1P35590 1138 aa10.94□□□□□ -0.66
SMARCE1-217ENST00000580654 MLLT1Q03111 559 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-217ENST00000580654 ABHD8Q96I13 439 aa10.94□□□□□ -0.66
SMARCE1-217ENST00000580654 ADAMTS7Q9UKP4 1686 aa10.94□□□□□ -0.66
SMARCE1-217ENST00000580654 INSRP06213 1382 aa10.93□□□□□ -0.66
SMARCE1-217ENST00000580654 CNTNAP1P78357 1384 aa10.93□□□□□ -0.66
SMARCE1-217ENST00000580654 TMOD3Q9NYL9 352 aa10.93□□□□□ -0.66
SMARCE1-217ENST00000580654 AFDNP55196 1824 aaKnown RBP10.93□□□□□ -0.66
SMARCE1-217ENST00000580654 DICER1Q9UPY3 1922 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-217ENST00000580654 RPS6KA4O75676 772 aa10.92□□□□□ -0.66
SMARCE1-217ENST00000580654 LMNB1P20700 586 aa10.92□□□□□ -0.66
SMARCE1-217ENST00000580654 CTCFP49711 727 aaPredicted RBP10.92□□□□□ -0.66
SMARCE1-217ENST00000580654 RGS19P49795 217 aa10.92□□□□□ -0.66
SMARCE1-217ENST00000580654 LBX1P52954 281 aa10.92□□□□□ -0.66
SMARCE1-217ENST00000580654 RC3H1Q5TC82 1133 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-217ENST00000580654 CNTNAP4Q9C0A0 1308 aa10.91□□□□□ -0.66
SMARCE1-217ENST00000580654 RFC4P35249 363 aa10.91□□□□□ -0.66
SMARCE1-217ENST00000580654 FKBP8Q14318 412 aa10.91□□□□□ -0.66
SMARCE1-217ENST00000580654 SRP68Q9UHB9 627 aaKnown RBP10.91□□□□□ -0.66
SMARCE1-217ENST00000580654 TRPC6Q9Y210 931 aa10.91□□□□□ -0.66
SMARCE1-217ENST00000580654 TNRC18O15417 2968 aaPredicted RBP10.91□□□□□ -0.66
SMARCE1-217ENST00000580654 NRXN2Q9P2S2 1712 aa10.9□□□□□ -0.66
SMARCE1-217ENST00000580654 PUS7Q96PZ0 661 aaKnown RBP10.9□□□□□ -0.66
SMARCE1-217ENST00000580654 WBP1LQ9NX94 342 aa10.9□□□□□ -0.66
SMARCE1-217ENST00000580654 COLQQ9Y215 455 aaPredicted RBP10.9□□□□□ -0.66
SMARCE1-217ENST00000580654 FLT4P35916 1363 aa10.9□□□□□ -0.67
SMARCE1-217ENST00000580654 TJP1Q07157 1748 aa10.89□□□□□ -0.67
SMARCE1-217ENST00000580654 KIF20BQ96Q89 1820 aa10.89□□□□□ -0.67
SMARCE1-217ENST00000580654 NFKBIEO00221 500 aa10.89□□□□□ -0.67
SMARCE1-217ENST00000580654 POLRMTO00411 1230 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-217ENST00000580654 FYB1O15117 783 aa10.89□□□□□ -0.67
SMARCE1-217ENST00000580654 SEC24BO95487 1268 aa10.89□□□□□ -0.67
SMARCE1-217ENST00000580654 HSPA8P11142 646 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-217ENST00000580654 PHKG2P15735 406 aa10.89□□□□□ -0.67
SMARCE1-217ENST00000580654 VEGFBP49765 207 aa10.89□□□□□ -0.67
SMARCE1-217ENST00000580654 GGNBP2Q9H3C7 697 aa10.89□□□□□ -0.67
SMARCE1-217ENST00000580654 PASKQ96RG2 1323 aa10.88□□□□□ -0.67
SMARCE1-217ENST00000580654 USP42Q9H9J4 1324 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-217ENST00000580654 TM4SF1P30408 202 aa10.88□□□□□ -0.67
SMARCE1-217ENST00000580654 FER1L6Q2WGJ9 1857 aa10.88□□□□□ -0.67
SMARCE1-217ENST00000580654 ANKRD26Q9UPS8 1709 aa10.88□□□□□ -0.67
SMARCE1-217ENST00000580654 SPG7Q9UQ90 795 aa10.88□□□□□ -0.67
SMARCE1-217ENST00000580654 TONSLQ96HA7 1378 aa10.88□□□□□ -0.67
SMARCE1-217ENST00000580654 AIDAQ96BJ3 306 aa10.87□□□□□ -0.67
SMARCE1-217ENST00000580654 SIN3AQ96ST3 1273 aa10.87□□□□□ -0.67
SMARCE1-217ENST00000580654 PDE4DIPQ5VU43 2346 aa10.87□□□□□ -0.67
SMARCE1-217ENST00000580654 KIF24Q5T7B8 1368 aa10.87□□□□□ -0.67
SMARCE1-217ENST00000580654 MAP3K13O43283 966 aa10.86□□□□□ -0.67
SMARCE1-217ENST00000580654 IFNL2Q8IZJ0 200 aa10.86□□□□□ -0.67
SMARCE1-217ENST00000580654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.86□□□□□ -0.675e-7■■□□□ 13.2
SMARCE1-217ENST00000580654 CCDC85CA6NKD9 419 aa10.85□□□□□ -0.67
SMARCE1-217ENST00000580654 TTLL13PA6NNM8 815 aa10.85□□□□□ -0.67
SMARCE1-217ENST00000580654 EMILIN1Q9Y6C2 1016 aa10.85□□□□□ -0.67
SMARCE1-217ENST00000580654 ADAMTSL1Q8N6G6 1762 aa10.85□□□□□ -0.67
SMARCE1-217ENST00000580654 ANKRD31Q8N7Z5 1873 aa10.85□□□□□ -0.67
SMARCE1-217ENST00000580654 THSD7BQ9C0I4 1608 aa10.84□□□□□ -0.67
SMARCE1-217ENST00000580654 ST18O60284 1047 aa10.84□□□□□ -0.67
SMARCE1-217ENST00000580654 ITGBL1O95965 494 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-217ENST00000580654 CRKLP46109 303 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-217ENST00000580654 IER5LQ5T953 404 aa10.84□□□□□ -0.67
SMARCE1-217ENST00000580654 TESK2Q96S53 571 aa10.84□□□□□ -0.67
SMARCE1-217ENST00000580654 EYA1Q99502 592 aa10.84□□□□□ -0.67
SMARCE1-217ENST00000580654 CARD11Q9BXL7 1154 aa10.84□□□□□ -0.67
SMARCE1-217ENST00000580654 SCN4AP35499 1836 aa10.84□□□□□ -0.67
SMARCE1-217ENST00000580654 CARMIL3Q8ND23 1372 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms