RNA–Protein interactions for RNA: ENST00000580542.5

ITGB4-207, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-207ENST00000580542 TMEM63CQ9P1W3 806 aa16.59■□□□□ 0.25
ITGB4-207ENST00000580542 PXDNQ92626 1479 aa16.59■□□□□ 0.25
ITGB4-207ENST00000580542 MAP3K19Q56UN5 1328 aa16.59■□□□□ 0.25
ITGB4-207ENST00000580542 TRERF1Q96PN7 1200 aa16.58■□□□□ 0.25
ITGB4-207ENST00000580542 NLRP6P59044 892 aa16.58■□□□□ 0.24
ITGB4-207ENST00000580542 NUCB1Q02818 461 aa16.58■□□□□ 0.24
ITGB4-207ENST00000580542 ABTB2Q8N961 1025 aa16.58■□□□□ 0.24
ITGB4-207ENST00000580542 PSME1Q06323 249 aa16.57■□□□□ 0.24
ITGB4-207ENST00000580542 KIF2CQ99661 725 aa16.57■□□□□ 0.24
ITGB4-207ENST00000580542 MED1Q15648 1581 aaPredicted RBP16.57■□□□□ 0.24
ITGB4-207ENST00000580542 TERF2Q15554 542 aa16.57■□□□□ 0.24
ITGB4-207ENST00000580542 AK9Q5TCS8 1911 aa16.57■□□□□ 0.24
ITGB4-207ENST00000580542 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.56■□□□□ 0.24
ITGB4-207ENST00000580542 IPO8O15397 1037 aaKnown RBP16.56■□□□□ 0.24
ITGB4-207ENST00000580542 ALDH1L2Q3SY69 923 aa16.56■□□□□ 0.24
ITGB4-207ENST00000580542 TSPYL1Q9H0U9 437 aa16.56■□□□□ 0.24
ITGB4-207ENST00000580542 TULP2O00295 520 aa16.56■□□□□ 0.24
ITGB4-207ENST00000580542 EIF4A2Q14240 407 aaKnown RBP16.56■□□□□ 0.24
ITGB4-207ENST00000580542 LNPKQ9C0E8 428 aa16.55■□□□□ 0.24
ITGB4-207ENST00000580542 TSPY26PQ9H489 355 aa16.55■□□□□ 0.24
ITGB4-207ENST00000580542 ARHGEF10O15013 1369 aa16.55■□□□□ 0.24
ITGB4-207ENST00000580542 FOXO3O43524 673 aa16.55■□□□□ 0.24
ITGB4-207ENST00000580542 LTBP4Q8N2S1 1624 aa16.55■□□□□ 0.24
ITGB4-207ENST00000580542 DLG5Q8TDM6 1919 aa16.55■□□□□ 0.24
ITGB4-207ENST00000580542 TNNT3P45378 269 aaPredicted RBP16.55■□□□□ 0.24
ITGB4-207ENST00000580542 SPTLC3Q9NUV7 552 aa16.55■□□□□ 0.24
ITGB4-207ENST00000580542 KDRP35968 1356 aa16.54■□□□□ 0.24
ITGB4-207ENST00000580542 NHSL1Q5SYE7 1610 aa16.54■□□□□ 0.24
ITGB4-207ENST00000580542 CTNNA3Q9UI47 895 aa16.54■□□□□ 0.24
ITGB4-207ENST00000580542 KRT28Q7Z3Y7 464 aa16.54■□□□□ 0.24
ITGB4-207ENST00000580542 CHD1LQ86WJ1 897 aa16.54■□□□□ 0.24
ITGB4-207ENST00000580542 CHMP4CQ96CF2 233 aa16.54■□□□□ 0.24
ITGB4-207ENST00000580542 CAMTA1Q9Y6Y1 1673 aa16.53■□□□□ 0.24
ITGB4-207ENST00000580542 PKP1Q13835 747 aa16.53■□□□□ 0.24
ITGB4-207ENST00000580542 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
ITGB4-207ENST00000580542 KCNH5Q8NCM2 988 aa16.53■□□□□ 0.24
ITGB4-207ENST00000580542 ABCC6O95255 1503 aa16.53■□□□□ 0.24
ITGB4-207ENST00000580542 CTIFO43310 598 aaKnown RBP16.52■□□□□ 0.24
ITGB4-207ENST00000580542 PRKAR2BP31323 418 aa16.52■□□□□ 0.24
ITGB4-207ENST00000580542 DDX41Q9UJV9 622 aaKnown RBP16.52■□□□□ 0.24
ITGB4-207ENST00000580542 NSFL1CQ9UNZ2 370 aaKnown RBP16.52■□□□□ 0.24
ITGB4-207ENST00000580542 NPHP3Q7Z494 1330 aa16.52■□□□□ 0.23
ITGB4-207ENST00000580542 BRPF1P55201 1214 aaPredicted RBP16.52■□□□□ 0.23
ITGB4-207ENST00000580542 TNS3Q68CZ2 1445 aa16.51■□□□□ 0.23
ITGB4-207ENST00000580542 HOXC9P31274 260 aa16.51■□□□□ 0.23
ITGB4-207ENST00000580542 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
ITGB4-207ENST00000580542 NCBP1Q09161 790 aaKnown RBP16.51■□□□□ 0.23
ITGB4-207ENST00000580542 USP25Q9UHP3 1055 aa16.51■□□□□ 0.23
ITGB4-207ENST00000580542 IGSF1Q8N6C5 1336 aa16.5■□□□□ 0.23
ITGB4-207ENST00000580542 NCAPD2Q15021 1401 aa16.5■□□□□ 0.23
ITGB4-207ENST00000580542 APPP05067 770 aa16.5■□□□□ 0.23
ITGB4-207ENST00000580542 BMP2KLQ5H9B9 411 aa16.5■□□□□ 0.23
ITGB4-207ENST00000580542 HDAC5Q9UQL6 1122 aa16.5■□□□□ 0.23
ITGB4-207ENST00000580542 COL18A1P39060 1754 aa16.5■□□□□ 0.23
ITGB4-207ENST00000580542 ZBTB7BO15156 539 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-207ENST00000580542 BRINP3Q76B58 766 aa16.49■□□□□ 0.23
ITGB4-207ENST00000580542 MORC2Q9Y6X9 1032 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-207ENST00000580542 KRT222Q8N1A0 295 aa16.49■□□□□ 0.23
ITGB4-207ENST00000580542 ZNF428Q96B54 188 aa16.49■□□□□ 0.23
ITGB4-207ENST00000580542 THUMPD2Q9BTF0 503 aaKnown RBP16.49■□□□□ 0.23
ITGB4-207ENST00000580542 MBD3O95983 291 aa16.49■□□□□ 0.23
ITGB4-207ENST00000580542 CYP2E1P05181 493 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-207ENST00000580542 NUTM2GQ5VZR2 741 aa16.49■□□□□ 0.23
ITGB4-207ENST00000580542 MRPL50Q8N5N7 158 aaKnown RBP16.49■□□□□ 0.23
ITGB4-207ENST00000580542 PHACTR3Q96KR7 559 aa16.49■□□□□ 0.23
ITGB4-207ENST00000580542 C1orf115Q9H7X2 142 aa16.49■□□□□ 0.23
ITGB4-207ENST00000580542 LMO7Q8WWI1 1683 aa16.48■□□□□ 0.23
ITGB4-207ENST00000580542 VAMP4O75379 141 aa16.48■□□□□ 0.23
ITGB4-207ENST00000580542 ADCY5O95622 1261 aa16.48■□□□□ 0.23
ITGB4-207ENST00000580542 IP6K1Q92551 441 aa16.48■□□□□ 0.23
ITGB4-207ENST00000580542 CHAMP1Q96JM3 812 aa16.48■□□□□ 0.23
ITGB4-207ENST00000580542 NFE2L2Q16236 605 aa16.48■□□□□ 0.23
ITGB4-207ENST00000580542 TSPYL6Q8N831 410 aa16.48■□□□□ 0.23
ITGB4-207ENST00000580542 FEZ2Q9UHY8 353 aaPredicted RBP16.48■□□□□ 0.23
ITGB4-207ENST00000580542 SOS2Q07890 1332 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-207ENST00000580542 ANKRD45Q5TZF3 282 aa16.47■□□□□ 0.23
ITGB4-207ENST00000580542 ARHGEF25Q86VW2 580 aa16.47■□□□□ 0.23
ITGB4-207ENST00000580542 SLAIN2Q9P270 581 aa16.47■□□□□ 0.23
ITGB4-207ENST00000580542 ABCA3Q99758 1704 aa16.47■□□□□ 0.23
ITGB4-207ENST00000580542 HMOX1P09601 288 aa16.47■□□□□ 0.23
ITGB4-207ENST00000580542 AMPHP49418 695 aa16.47■□□□□ 0.23
ITGB4-207ENST00000580542 SPATA31A3Q5VYP0 1347 aa16.46■□□□□ 0.23
ITGB4-207ENST00000580542 GCP02774 474 aa16.46■□□□□ 0.23
ITGB4-207ENST00000580542 FOXD4L5Q5VV16 416 aaPredicted RBP16.46■□□□□ 0.23
ITGB4-207ENST00000580542 FOXD4L4Q8WXT5 416 aaPredicted RBP16.46■□□□□ 0.23
ITGB4-207ENST00000580542 GCC1Q96CN9 775 aa16.46■□□□□ 0.23
ITGB4-207ENST00000580542 PLCB2Q00722 1185 aa16.46■□□□□ 0.23
ITGB4-207ENST00000580542 KIF18AQ8NI77 898 aa16.46■□□□□ 0.23
ITGB4-207ENST00000580542 ARHGAP45Q92619 1136 aa16.46■□□□□ 0.23
ITGB4-207ENST00000580542 SIRT2Q8IXJ6 389 aa16.45■□□□□ 0.22
ITGB4-207ENST00000580542 SYAP1Q96A49 352 aaPredicted RBP16.45■□□□□ 0.22
ITGB4-207ENST00000580542 YY1AP1Q9H869 796 aa16.45■□□□□ 0.22
ITGB4-207ENST00000580542 EFCC1Q9HA90 598 aa16.45■□□□□ 0.22
ITGB4-207ENST00000580542 GEMIN8Q9NWZ8 242 aaKnown RBP16.45■□□□□ 0.22
ITGB4-207ENST00000580542 ABCC4O15439 1325 aa16.45■□□□□ 0.22
ITGB4-207ENST00000580542 SOX12O15370 315 aa16.44■□□□□ 0.22
ITGB4-207ENST00000580542 RGPD2P0DJD1 1756 aa16.44■□□□□ 0.22
ITGB4-207ENST00000580542 TBC1D9Q6ZT07 1266 aa16.44■□□□□ 0.22
ITGB4-207ENST00000580542 KIAA1524Q8TCG1 905 aa16.44■□□□□ 0.22
ITGB4-207ENST00000580542 EYA1Q99502 592 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms