RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 KRT24Q2M2I5 525 aa18.33■□□□□ 0.52
SKA2-205ENST00000580541 ALDH1L2Q3SY69 923 aa18.33■□□□□ 0.52
SKA2-205ENST00000580541 SLC4A9Q96Q91 983 aa18.33■□□□□ 0.52
SKA2-205ENST00000580541 RGPD3A6NKT7 1758 aaPredicted RBP18.32■□□□□ 0.52
SKA2-205ENST00000580541 RGPD4Q7Z3J3 1758 aa18.32■□□□□ 0.52
SKA2-205ENST00000580541 ITPK1Q13572 414 aa18.31■□□□□ 0.52
SKA2-205ENST00000580541 EZH2Q15910 746 aaKnown RBP18.31■□□□□ 0.52
SKA2-205ENST00000580541 NBPF14Q5TI25 921 aa18.31■□□□□ 0.52
SKA2-205ENST00000580541 PROM2Q8N271 834 aa18.31■□□□□ 0.52
SKA2-205ENST00000580541 CCDC87Q9NVE4 849 aa18.31■□□□□ 0.52
SKA2-205ENST00000580541 HYPKQ9NX55 129 aa18.31■□□□□ 0.52
SKA2-205ENST00000580541 CNTNAP4Q9C0A0 1308 aa18.3■□□□□ 0.52
SKA2-205ENST00000580541 CRKLP46109 303 aaKnown RBP18.3■□□□□ 0.52
SKA2-205ENST00000580541 DEFB132Q7Z7B7 95 aa18.3■□□□□ 0.52
SKA2-205ENST00000580541 AK7Q96M32 723 aa18.3■□□□□ 0.52
SKA2-205ENST00000580541 DDX21Q9NR30 783 aaKnown RBP eCLIP18.3■□□□□ 0.52
SKA2-205ENST00000580541 LRRC4BQ9NT99 713 aa18.3■□□□□ 0.52
SKA2-205ENST00000580541 CACNA1FO60840 1977 aa18.3■□□□□ 0.52
SKA2-205ENST00000580541 PRAMEF22A3QJZ6 481 aa18.29■□□□□ 0.52
SKA2-205ENST00000580541 NECTIN2Q92692 538 aa18.29■□□□□ 0.52
SKA2-205ENST00000580541 A0A087WZG4 1122 aa18.28■□□□□ 0.52
SKA2-205ENST00000580541 A1BGP04217 495 aa18.28■□□□□ 0.52
SKA2-205ENST00000580541 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
SKA2-205ENST00000580541 IL6STP40189 918 aaPredicted RBP18.28■□□□□ 0.52
SKA2-205ENST00000580541 KCNQ4P56696 695 aa18.28■□□□□ 0.52
SKA2-205ENST00000580541 LINC00116Q8NCU8 138 aa18.28■□□□□ 0.52
SKA2-205ENST00000580541 RCAN3Q9UKA8 241 aa18.28■□□□□ 0.52
SKA2-205ENST00000580541 RTCBQ9Y3I0 505 aaKnown RBP18.28■□□□□ 0.52
SKA2-205ENST00000580541 RPS6KA4O75676 772 aa18.27■□□□□ 0.52
SKA2-205ENST00000580541 CANXP27824 592 aaKnown RBP18.27■□□□□ 0.52
SKA2-205ENST00000580541 RARSP54136 660 aaKnown RBP18.27■□□□□ 0.52
SKA2-205ENST00000580541 FLAD1Q8NFF5 587 aa18.27■□□□□ 0.52
SKA2-205ENST00000580541 SMC4Q9NTJ3 1288 aa18.27■□□□□ 0.52
SKA2-205ENST00000580541 STK32BQ9NY57 414 aa18.27■□□□□ 0.52
SKA2-205ENST00000580541 CICQ96RK0 1608 aaPredicted RBP18.27■□□□□ 0.51
SKA2-205ENST00000580541 IPO8O15397 1037 aaKnown RBP18.26■□□□□ 0.51
SKA2-205ENST00000580541 INTS5Q6P9B9 1019 aaKnown RBP18.26■□□□□ 0.51
SKA2-205ENST00000580541 CHPF2Q9P2E5 772 aa18.26■□□□□ 0.51
SKA2-205ENST00000580541 LAMB4A4D0S4 1761 aa18.25■□□□□ 0.51
SKA2-205ENST00000580541 GNPATO15228 680 aa18.25■□□□□ 0.51
SKA2-205ENST00000580541 DDX58O95786 925 aaKnown RBP18.25■□□□□ 0.51
SKA2-205ENST00000580541 MYL6BP14649 208 aa18.25■□□□□ 0.51
SKA2-205ENST00000580541 BRPF1P55201 1214 aaPredicted RBP18.25■□□□□ 0.51
SKA2-205ENST00000580541 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.25■□□□□ 0.51
SKA2-205ENST00000580541 SSH1Q8WYL5 1049 aa18.25■□□□□ 0.51
SKA2-205ENST00000580541 TFCP2L1Q9NZI6 479 aa18.25■□□□□ 0.51
SKA2-205ENST00000580541 TRAPPC3LQ5T215 181 aa18.24■□□□□ 0.51
SKA2-205ENST00000580541 ZBTB1Q9Y2K1 713 aa18.24■□□□□ 0.51
SKA2-205ENST00000580541 C5P01031 1676 aa18.24■□□□□ 0.51
SKA2-205ENST00000580541 KIF16BQ96L93 1317 aa18.23■□□□□ 0.51
SKA2-205ENST00000580541 TJP1Q07157 1748 aa18.23■□□□□ 0.51
SKA2-205ENST00000580541 TAF1LQ8IZX4 1826 aa18.23■□□□□ 0.51
SKA2-205ENST00000580541 SOCS7O14512 581 aa18.23■□□□□ 0.51
SKA2-205ENST00000580541 SSFA2P28290 1259 aa18.23■□□□□ 0.51
SKA2-205ENST00000580541 EIF5P55010 431 aaKnown RBP18.23■□□□□ 0.51
SKA2-205ENST00000580541 PDIA6Q15084 440 aa18.23■□□□□ 0.51
SKA2-205ENST00000580541 ARXQ96QS3 562 aa18.23■□□□□ 0.51
SKA2-205ENST00000580541 ZNF330Q9Y3S2 320 aaPredicted RBP18.23■□□□□ 0.51
SKA2-205ENST00000580541 NBPF26B4DH59 902 aa18.22■□□□□ 0.51
SKA2-205ENST00000580541 NBPF10Q6P3W6 841 aaKnown RBP18.22■□□□□ 0.51
SKA2-205ENST00000580541 KIF6Q6ZMV9 814 aa18.22■□□□□ 0.51
SKA2-205ENST00000580541 MRPL50Q8N5N7 158 aaKnown RBP18.22■□□□□ 0.51
SKA2-205ENST00000580541 NBPF15Q8N660 670 aa18.22■□□□□ 0.51
SKA2-205ENST00000580541 AKT1S1Q96B36 256 aa18.22■□□□□ 0.51
SKA2-205ENST00000580541 PTPRCP08575 1304 aa18.22■□□□□ 0.51
SKA2-205ENST00000580541 C4BP0C0L5 1744 aa18.21■□□□□ 0.51
SKA2-205ENST00000580541 COL5A3P25940 1745 aaPredicted RBP18.21■□□□□ 0.51
SKA2-205ENST00000580541 TCERG1O14776 1098 aaKnown RBP18.21■□□□□ 0.51
SKA2-205ENST00000580541 MS4A1P11836 297 aa18.21■□□□□ 0.51
SKA2-205ENST00000580541 RFC4P35249 363 aa18.21■□□□□ 0.51
SKA2-205ENST00000580541 SLC15A2Q16348 729 aa18.21■□□□□ 0.51
SKA2-205ENST00000580541 ARHGAP45Q92619 1136 aa18.21■□□□□ 0.51
SKA2-205ENST00000580541 ZPR1O75312 459 aa18.2■□□□□ 0.5
SKA2-205ENST00000580541 AIMP1Q12904 312 aaKnown RBP18.2■□□□□ 0.5
SKA2-205ENST00000580541 FLIIQ13045 1269 aa18.2■□□□□ 0.5
SKA2-205ENST00000580541 COPS6Q7L5N1 327 aa18.2■□□□□ 0.5
SKA2-205ENST00000580541 MYH14Q7Z406 1995 aaKnown RBP18.2■□□□□ 0.5
SKA2-205ENST00000580541 RGL2O15211 777 aa18.19■□□□□ 0.5
SKA2-205ENST00000580541 FKBP5Q13451 457 aaPredicted RBP18.19■□□□□ 0.5
SKA2-205ENST00000580541 ANKRD13DQ6ZTN6 518 aa18.19■□□□□ 0.5
SKA2-205ENST00000580541 DZIP3Q86Y13 1208 aaKnown RBP18.19■□□□□ 0.5
SKA2-205ENST00000580541 XAGE3Q8WTP9 111 aa18.19■□□□□ 0.5
SKA2-205ENST00000580541 BCL2L13Q9BXK5 485 aa18.19■□□□□ 0.5
SKA2-205ENST00000580541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.18■□□□□ 0.5
SKA2-205ENST00000580541 ERVV-1B6SEH8 477 aa18.18■□□□□ 0.5
SKA2-205ENST00000580541 BCAR3O75815 825 aa18.18■□□□□ 0.5
SKA2-205ENST00000580541 ANXA1P04083 346 aa18.18■□□□□ 0.5
SKA2-205ENST00000580541 PIP4K2AP48426 406 aaPredicted RBP18.18■□□□□ 0.5
SKA2-205ENST00000580541 PROSER3Q2NL68 480 aa18.18■□□□□ 0.5
SKA2-205ENST00000580541 RIC3Q7Z5B4 369 aa18.18■□□□□ 0.5
SKA2-205ENST00000580541 API5Q9BZZ5 524 aaKnown RBP18.18■□□□□ 0.5
SKA2-205ENST00000580541 NOB1Q9ULX3 412 aaKnown RBP18.18■□□□□ 0.5
SKA2-205ENST00000580541 ZNF652Q9Y2D9 606 aa18.18■□□□□ 0.5
SKA2-205ENST00000580541 COL15A1P39059 1388 aa18.17■□□□□ 0.5
SKA2-205ENST00000580541 PHF14O94880 888 aa18.17■□□□□ 0.5
SKA2-205ENST00000580541 ZKSCAN2Q63HK3 967 aa18.17■□□□□ 0.5
SKA2-205ENST00000580541 KSR2Q6VAB6 950 aa18.17■□□□□ 0.5
SKA2-205ENST00000580541 PLBD2Q8NHP8 589 aa18.17■□□□□ 0.5
SKA2-205ENST00000580541 FRAT1Q92837 279 aaPredicted RBP18.17■□□□□ 0.5
SKA2-205ENST00000580541 ARHGEF1Q92888 912 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms