RNA–Protein interactions for RNA: ENST00000580471.1

SUPT6H-205, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 2

Gene SUPT6H, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-205ENST00000580471 USP31Q70CQ4 1352 aa12.93□□□□□ -0.34
SUPT6H-205ENST00000580471 COL25A1Q9BXS0 654 aaPredicted RBP12.92□□□□□ -0.34
SUPT6H-205ENST00000580471 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
SUPT6H-205ENST00000580471 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
SUPT6H-205ENST00000580471 LTBP3Q9NS15 1303 aa12.91□□□□□ -0.34
SUPT6H-205ENST00000580471 NRXN2Q9P2S2 1712 aa12.91□□□□□ -0.34
SUPT6H-205ENST00000580471 SAPCD2Q86UD0 394 aa12.91□□□□□ -0.34
SUPT6H-205ENST00000580471 ZIC5Q96T25 663 aa12.91□□□□□ -0.34
SUPT6H-205ENST00000580471 INSRP06213 1382 aa12.91□□□□□ -0.34
SUPT6H-205ENST00000580471 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
SUPT6H-205ENST00000580471 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
SUPT6H-205ENST00000580471 RNF123Q5XPI4 1314 aa12.9□□□□□ -0.34
SUPT6H-205ENST00000580471 TRAF5O00463 557 aa12.9□□□□□ -0.34
SUPT6H-205ENST00000580471 TAOK3Q9H2K8 898 aa12.9□□□□□ -0.34
SUPT6H-205ENST00000580471 SAGE1Q9NXZ1 904 aa12.9□□□□□ -0.34
SUPT6H-205ENST00000580471 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
SUPT6H-205ENST00000580471 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
SUPT6H-205ENST00000580471 CGNL1Q0VF96 1302 aa12.89□□□□□ -0.35
SUPT6H-205ENST00000580471 ZNF541Q9H0D2 1346 aa12.89□□□□□ -0.35
SUPT6H-205ENST00000580471 IP6K1Q92551 441 aa12.89□□□□□ -0.35
SUPT6H-205ENST00000580471 HHIPL1Q96JK4 782 aa12.89□□□□□ -0.35
SUPT6H-205ENST00000580471 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
SUPT6H-205ENST00000580471 KDRP35968 1356 aa12.89□□□□□ -0.35
SUPT6H-205ENST00000580471 C21orf2O43822 256 aa12.88□□□□□ -0.35
SUPT6H-205ENST00000580471 ASAP1Q9ULH1 1129 aa12.88□□□□□ -0.35
SUPT6H-205ENST00000580471 MYH14Q7Z406 1995 aaKnown RBP12.88□□□□□ -0.35
SUPT6H-205ENST00000580471 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
SUPT6H-205ENST00000580471 RPS6KA4O75676 772 aa12.87□□□□□ -0.35
SUPT6H-205ENST00000580471 NOGQ13253 232 aa12.87□□□□□ -0.35
SUPT6H-205ENST00000580471 C2CD5Q86YS7 1000 aa12.87□□□□□ -0.35
SUPT6H-205ENST00000580471 KDM2AQ9Y2K7 1162 aa12.87□□□□□ -0.35
SUPT6H-205ENST00000580471 RANBP2P49792 3224 aaKnown RBP12.87□□□□□ -0.35
SUPT6H-205ENST00000580471 CNTNAP4Q9C0A0 1308 aa12.87□□□□□ -0.35
SUPT6H-205ENST00000580471 BRCA2P51587 3418 aa12.87□□□□□ -0.35
SUPT6H-205ENST00000580471 CYP27B1O15528 508 aa12.86□□□□□ -0.35
SUPT6H-205ENST00000580471 TM4SF1P30408 202 aa12.86□□□□□ -0.35
SUPT6H-205ENST00000580471 AKAP4Q5JQC9 854 aa12.86□□□□□ -0.35
SUPT6H-205ENST00000580471 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
SUPT6H-205ENST00000580471 COL11A2P13942 1736 aaPredicted RBP12.85□□□□□ -0.35
SUPT6H-205ENST00000580471 KTN1Q86UP2 1357 aaKnown RBP12.85□□□□□ -0.35
SUPT6H-205ENST00000580471 PKN2Q16513 984 aaKnown RBP12.85□□□□□ -0.35
SUPT6H-205ENST00000580471 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
SUPT6H-205ENST00000580471 MPHOSPH9Q99550 1183 aa12.85□□□□□ -0.35
SUPT6H-205ENST00000580471 VCANP13611 3396 aa12.84□□□□□ -0.35
SUPT6H-205ENST00000580471 CARMIL3Q8ND23 1372 aa12.84□□□□□ -0.35
SUPT6H-205ENST00000580471 AKAP11Q9UKA4 1901 aa12.84□□□□□ -0.35
SUPT6H-205ENST00000580471 TRPA1O75762 1119 aa12.84□□□□□ -0.35
SUPT6H-205ENST00000580471 NME9Q86XW9 330 aa12.84□□□□□ -0.35
SUPT6H-205ENST00000580471 USHBP1Q8N6Y0 703 aa12.84□□□□□ -0.35
SUPT6H-205ENST00000580471 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
SUPT6H-205ENST00000580471 PRDM6Q9NQX0 595 aa12.84□□□□□ -0.35
SUPT6H-205ENST00000580471 CACNA1SQ13698 1873 aa12.84□□□□□ -0.35
SUPT6H-205ENST00000580471 MAP3K19Q56UN5 1328 aa12.84□□□□□ -0.35
SUPT6H-205ENST00000580471 RBBP6Q7Z6E9 1792 aaKnown RBP12.84□□□□□ -0.35
SUPT6H-205ENST00000580471 PAPPA2Q9BXP8 1791 aa12.84□□□□□ -0.35
SUPT6H-205ENST00000580471 H0YIN7 160 aa12.83□□□□□ -0.36
SUPT6H-205ENST00000580471 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.83□□□□□ -0.36
SUPT6H-205ENST00000580471 SLC4A9Q96Q91 983 aa12.83□□□□□ -0.36
SUPT6H-205ENST00000580471 RNF186Q9NXI6 227 aa12.83□□□□□ -0.36
SUPT6H-205ENST00000580471 SPTBN5Q9NRC6 3674 aaKnown RBP12.82□□□□□ -0.36
SUPT6H-205ENST00000580471 CELF2O95319 508 aaKnown RBP12.82□□□□□ -0.36
SUPT6H-205ENST00000580471 DCAF11Q8TEB1 546 aa12.82□□□□□ -0.36
SUPT6H-205ENST00000580471 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
SUPT6H-205ENST00000580471 ANKRD31Q8N7Z5 1873 aa12.82□□□□□ -0.36
SUPT6H-205ENST00000580471 CENPJQ9HC77 1338 aaPredicted RBP12.82□□□□□ -0.36
SUPT6H-205ENST00000580471 POTEFA5A3E0 1075 aa12.81□□□□□ -0.36
SUPT6H-205ENST00000580471 TATP17735 454 aaPredicted RBP12.81□□□□□ -0.36
SUPT6H-205ENST00000580471 NBPF6Q5VWK0 638 aa12.81□□□□□ -0.36
SUPT6H-205ENST00000580471 BICDL1Q6ZP65 573 aa12.81□□□□□ -0.36
SUPT6H-205ENST00000580471 NBPF4Q96M43 638 aa12.81□□□□□ -0.36
SUPT6H-205ENST00000580471 TMOD3Q9NYL9 352 aa12.81□□□□□ -0.36
SUPT6H-205ENST00000580471 HTTP42858 3142 aa12.81□□□□□ -0.36
SUPT6H-205ENST00000580471 BCORQ6W2J9 1755 aa12.8□□□□□ -0.36
SUPT6H-205ENST00000580471 HOXC9P31274 260 aa12.8□□□□□ -0.36
SUPT6H-205ENST00000580471 ARFGEF2Q9Y6D5 1785 aa12.79□□□□□ -0.36
SUPT6H-205ENST00000580471 SLX4Q8IY92 1834 aa12.79□□□□□ -0.36
SUPT6H-205ENST00000580471 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
SUPT6H-205ENST00000580471 ZNF622Q969S3 477 aaKnown RBP eCLIP12.79□□□□□ -0.36
SUPT6H-205ENST00000580471 CENPFP49454 3210 aa12.79□□□□□ -0.36
SUPT6H-205ENST00000580471 CEP290O15078 2479 aa12.79□□□□□ -0.36
SUPT6H-205ENST00000580471 COL9A1P20849 921 aa12.78□□□□□ -0.36
SUPT6H-205ENST00000580471 NKX1-1Q15270 411 aaPredicted RBP12.78□□□□□ -0.36
SUPT6H-205ENST00000580471 FBXO46Q6PJ61 603 aaPredicted RBP12.78□□□□□ -0.36
SUPT6H-205ENST00000580471 SYNE4Q8N205 404 aa12.78□□□□□ -0.36
SUPT6H-205ENST00000580471 RBM27Q9P2N5 1060 aaKnown RBP12.78□□□□□ -0.36
SUPT6H-205ENST00000580471 H0YGN5 161 aa12.77□□□□□ -0.37
SUPT6H-205ENST00000580471 NFIXQ14938 502 aa12.77□□□□□ -0.37
SUPT6H-205ENST00000580471 GPC2Q8N158 579 aa12.77□□□□□ -0.37
SUPT6H-205ENST00000580471 SBNO2Q9Y2G9 1366 aa12.77□□□□□ -0.37
SUPT6H-205ENST00000580471 LAMB4A4D0S4 1761 aa12.76□□□□□ -0.37
SUPT6H-205ENST00000580471 FAM155AB1AL88 458 aaPredicted RBP12.76□□□□□ -0.37
SUPT6H-205ENST00000580471 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
SUPT6H-205ENST00000580471 HDAC9Q9UKV0 1011 aa12.76□□□□□ -0.37
SUPT6H-205ENST00000580471 LAMA3Q16787 3333 aa12.75□□□□□ -0.37
SUPT6H-205ENST00000580471 SERPINB2P05120 415 aa12.75□□□□□ -0.37
SUPT6H-205ENST00000580471 PLA2G5P39877 138 aa12.75□□□□□ -0.37
SUPT6H-205ENST00000580471 KIF23Q02241 960 aaPredicted RBP12.75□□□□□ -0.37
SUPT6H-205ENST00000580471 USPL1Q5W0Q7 1092 aa12.75□□□□□ -0.37
SUPT6H-205ENST00000580471 ZNF408Q9H9D4 720 aa12.75□□□□□ -0.37
SUPT6H-205ENST00000580471 FZD9O00144 591 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms