RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 FBLN1P23142 703 aa12.74□□□□□ -0.37
SNX11-206ENST00000580219 TMPOP42166 694 aaKnown RBP12.74□□□□□ -0.37
SNX11-206ENST00000580219 KCNQ4P56696 695 aa12.74□□□□□ -0.37
SNX11-206ENST00000580219 SLC27A3Q5K4L6 730 aa12.74□□□□□ -0.37
SNX11-206ENST00000580219 COL23A1Q86Y22 540 aaPredicted RBP12.74□□□□□ -0.37
SNX11-206ENST00000580219 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.74□□□□□ -0.37
SNX11-206ENST00000580219 RSPH6AQ9H0K4 717 aa12.74□□□□□ -0.37
SNX11-206ENST00000580219 EMILIN1Q9Y6C2 1016 aa12.74□□□□□ -0.37
SNX11-206ENST00000580219 MYH16Q9H6N6 1097 aa12.73□□□□□ -0.37
SNX11-206ENST00000580219 COL18A1P39060 1754 aa12.72□□□□□ -0.37
SNX11-206ENST00000580219 RGPD5Q99666 1765 aa12.72□□□□□ -0.37
SNX11-206ENST00000580219 KIAA1551Q9HCM1 1747 aa12.72□□□□□ -0.37
SNX11-206ENST00000580219 ZBTB7CA1YPR0 619 aa12.72□□□□□ -0.37
SNX11-206ENST00000580219 EXOC5O00471 708 aa12.72□□□□□ -0.37
SNX11-206ENST00000580219 PPM1GO15355 546 aaPredicted RBP12.72□□□□□ -0.37
SNX11-206ENST00000580219 CT47B1P0C2W7 299 aaPredicted RBP12.72□□□□□ -0.37
SNX11-206ENST00000580219 RRS1Q15050 365 aaKnown RBP12.72□□□□□ -0.37
SNX11-206ENST00000580219 MAP3K19Q56UN5 1328 aa12.71□□□□□ -0.37
SNX11-206ENST00000580219 ARHGEF25Q86VW2 580 aa12.71□□□□□ -0.37
SNX11-206ENST00000580219 ABCC6O95255 1503 aa12.71□□□□□ -0.38
SNX11-206ENST00000580219 FLT4P35916 1363 aa12.7□□□□□ -0.38
SNX11-206ENST00000580219 HSPA8P11142 646 aaKnown RBP12.7□□□□□ -0.38
SNX11-206ENST00000580219 PRPF38BQ5VTL8 546 aaKnown RBP12.7□□□□□ -0.38
SNX11-206ENST00000580219 C9orf131Q5VYM1 1079 aa12.7□□□□□ -0.38
SNX11-206ENST00000580219 ARHGAP27Q6ZUM4 889 aa12.7□□□□□ -0.38
SNX11-206ENST00000580219 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
SNX11-206ENST00000580219 RTL1A6NKG5 1358 aa12.69□□□□□ -0.38
SNX11-206ENST00000580219 PRKAR2BP31323 418 aa12.69□□□□□ -0.38
SNX11-206ENST00000580219 VASPP50552 380 aaPredicted RBP12.69□□□□□ -0.38
SNX11-206ENST00000580219 CALD1Q05682 793 aaKnown RBP12.69□□□□□ -0.38
SNX11-206ENST00000580219 LMOD3Q0VAK6 560 aa12.69□□□□□ -0.38
SNX11-206ENST00000580219 NEUROD2Q15784 382 aa12.69□□□□□ -0.38
SNX11-206ENST00000580219 NFE2L2Q16236 605 aa12.69□□□□□ -0.38
SNX11-206ENST00000580219 TRIM35Q9UPQ4 493 aa12.69□□□□□ -0.38
SNX11-206ENST00000580219 BRCA1P38398 1863 aaKnown RBP12.68□□□□□ -0.38
SNX11-206ENST00000580219 RIPK4P57078 832 aa12.68□□□□□ -0.38
SNX11-206ENST00000580219 CNTNAP1P78357 1384 aa12.68□□□□□ -0.38
SNX11-206ENST00000580219 SBF1O95248 1867 aa12.68□□□□□ -0.38
SNX11-206ENST00000580219 KIF13BQ9NQT8 1826 aa12.67□□□□□ -0.38
SNX11-206ENST00000580219 ARFGEF1Q9Y6D6 1849 aa12.67□□□□□ -0.38
SNX11-206ENST00000580219 WDR17Q8IZU2 1322 aa12.67□□□□□ -0.38
SNX11-206ENST00000580219 HOXC9P31274 260 aa12.67□□□□□ -0.38
SNX11-206ENST00000580219 AMPHP49418 695 aa12.67□□□□□ -0.38
SNX11-206ENST00000580219 EIF4A2Q14240 407 aaKnown RBP12.67□□□□□ -0.38
SNX11-206ENST00000580219 WBP1LQ9NX94 342 aa12.67□□□□□ -0.38
SNX11-206ENST00000580219 BCS1LQ9Y276 419 aa12.67□□□□□ -0.38
SNX11-206ENST00000580219 A0A0C4DFX4 3053 aa12.66□□□□□ -0.38
SNX11-206ENST00000580219 IP6K1Q92551 441 aa12.66□□□□□ -0.38
SNX11-206ENST00000580219 CCDC136Q96JN2 1154 aa12.66□□□□□ -0.38
SNX11-206ENST00000580219 C5P01031 1676 aa12.65□□□□□ -0.38
SNX11-206ENST00000580219 B4GALNT3Q6L9W6 998 aa12.65□□□□□ -0.38
SNX11-206ENST00000580219 HMOX1P09601 288 aa12.64□□□□□ -0.39
SNX11-206ENST00000580219 PDE3AQ14432 1141 aa12.64□□□□□ -0.39
SNX11-206ENST00000580219 HSP90AB2PQ58FF8 381 aa12.64□□□□□ -0.39
SNX11-206ENST00000580219 EXOC6Q8TAG9 804 aa12.64□□□□□ -0.39
SNX11-206ENST00000580219 AXIN2Q9Y2T1 843 aa12.64□□□□□ -0.39
SNX11-206ENST00000580219 KDRP35968 1356 aa12.64□□□□□ -0.39
SNX11-206ENST00000580219 FANCIQ9NVI1 1328 aa12.63□□□□□ -0.39
SNX11-206ENST00000580219 ZNF428Q96B54 188 aa12.63□□□□□ -0.39
SNX11-206ENST00000580219 FAM208AQ9UK61 1670 aaKnown RBP12.62□□□□□ -0.39
SNX11-206ENST00000580219 PLIN1O60240 522 aa12.62□□□□□ -0.39
SNX11-206ENST00000580219 GABBR2O75899 941 aa12.62□□□□□ -0.39
SNX11-206ENST00000580219 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
SNX11-206ENST00000580219 AAMPQ13685 434 aa12.62□□□□□ -0.39
SNX11-206ENST00000580219 PHACTR3Q96KR7 559 aa12.62□□□□□ -0.39
SNX11-206ENST00000580219 RNF181Q9P0P0 153 aa12.62□□□□□ -0.39
SNX11-206ENST00000580219 CUL9Q8IWT3 2517 aa12.62□□□□□ -0.39
SNX11-206ENST00000580219 ERBB3P21860 1342 aa12.62□□□□□ -0.39
SNX11-206ENST00000580219 TAF1LQ8IZX4 1826 aa12.61□□□□□ -0.39
SNX11-206ENST00000580219 DLL1O00548 723 aa12.61□□□□□ -0.39
SNX11-206ENST00000580219 VEGFBP49765 207 aa12.61□□□□□ -0.39
SNX11-206ENST00000580219 SULT6B1Q6IMI4 303 aa12.61□□□□□ -0.39
SNX11-206ENST00000580219 ZNF579Q8NAF0 562 aaKnown RBP12.61□□□□□ -0.39
SNX11-206ENST00000580219 ANKRD24Q8TF21 1146 aa12.61□□□□□ -0.39
SNX11-206ENST00000580219 CRBNQ96SW2 442 aa12.61□□□□□ -0.39
SNX11-206ENST00000580219 CARD10Q9BWT7 1032 aa12.61□□□□□ -0.39
SNX11-206ENST00000580219 IFT57Q9NWB7 429 aa12.61□□□□□ -0.39
SNX11-206ENST00000580219 DOT1LQ8TEK3 1739 aa12.61□□□□□ -0.39
SNX11-206ENST00000580219 NUBP1P53384 320 aa12.6□□□□□ -0.39
SNX11-206ENST00000580219 GNAI1P63096 354 aa12.6□□□□□ -0.39
SNX11-206ENST00000580219 LTV1Q96GA3 475 aaPredicted RBP12.6□□□□□ -0.39
SNX11-206ENST00000580219 ZBTB47Q9UFB7 747 aaPredicted RBP12.6□□□□□ -0.39
SNX11-206ENST00000580219 RGPD2P0DJD1 1756 aa12.6□□□□□ -0.39
SNX11-206ENST00000580219 BCAR3O75815 825 aa12.59□□□□□ -0.39
SNX11-206ENST00000580219 ZNF853P0CG23 659 aa12.59□□□□□ -0.39
SNX11-206ENST00000580219 CSB-PGBD3P0DP91 1061 aa12.59□□□□□ -0.39
SNX11-206ENST00000580219 MS4A1P11836 297 aa12.59□□□□□ -0.39
SNX11-206ENST00000580219 VEGFAP15692 232 aaPredicted RBP12.59□□□□□ -0.39
SNX11-206ENST00000580219 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
SNX11-206ENST00000580219 CCNL1Q9UK58 526 aaPredicted RBP12.59□□□□□ -0.39
SNX11-206ENST00000580219 TOGARAM1Q9Y4F4 1720 aa12.59□□□□□ -0.39
SNX11-206ENST00000580219 SZT2Q5T011 3432 aa12.58□□□□□ -0.4
SNX11-206ENST00000580219 TIAM2Q8IVF5 1701 aa12.57□□□□□ -0.4
SNX11-206ENST00000580219 NCAPD2Q15021 1401 aa12.57□□□□□ -0.4
SNX11-206ENST00000580219 EXOSC9Q06265 439 aaKnown RBP12.57□□□□□ -0.4
SNX11-206ENST00000580219 ALDH1L2Q3SY69 923 aa12.57□□□□□ -0.4
SNX11-206ENST00000580219 C20orf194Q5TEA3 1177 aa12.57□□□□□ -0.4
SNX11-206ENST00000580219 AEBP1Q8IUX7 1158 aa12.57□□□□□ -0.4
SNX11-206ENST00000580219 GAS2L2Q8NHY3 880 aa12.57□□□□□ -0.4
SNX11-206ENST00000580219 TSR2Q969E8 191 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms