RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 KRT32Q14532 448 aa16■□□□□ 0.15
TRAPPC8-207ENST00000580104 MPRIPQ6WCQ1 1025 aa16■□□□□ 0.15
TRAPPC8-207ENST00000580104 CCDC186Q7Z3E2 898 aa16■□□□□ 0.15
TRAPPC8-207ENST00000580104 ECHDC1Q9NTX5 307 aa16■□□□□ 0.15
TRAPPC8-207ENST00000580104 FOXO3O43524 673 aa16■□□□□ 0.15
TRAPPC8-207ENST00000580104 MARCH6O60337 910 aa16■□□□□ 0.15
TRAPPC8-207ENST00000580104 NOL7Q9UMY1 257 aaKnown RBP16■□□□□ 0.15
TRAPPC8-207ENST00000580104 LMBRD1Q9NUN5 540 aa15.99■□□□□ 0.15
TRAPPC8-207ENST00000580104 BIN1O00499 593 aa15.99■□□□□ 0.15
TRAPPC8-207ENST00000580104 CD2BP2O95400 341 aaKnown RBP15.99■□□□□ 0.15
TRAPPC8-207ENST00000580104 CFAP100Q494V2 611 aa15.99■□□□□ 0.15
TRAPPC8-207ENST00000580104 NCKAP5LQ9HCH0 1330 aa15.98■□□□□ 0.15
TRAPPC8-207ENST00000580104 HS1BP3Q53T59 392 aa15.98■□□□□ 0.15
TRAPPC8-207ENST00000580104 UBXN4Q92575 508 aa15.98■□□□□ 0.15
TRAPPC8-207ENST00000580104 TRERF1Q96PN7 1200 aa15.98■□□□□ 0.15
TRAPPC8-207ENST00000580104 CD109Q6YHK3 1445 aa15.98■□□□□ 0.15
TRAPPC8-207ENST00000580104 SFPQP23246 707 aaKnown RBP eCLIP15.98■□□□□ 0.15
TRAPPC8-207ENST00000580104 CCDC70Q6NSX1 233 aa15.98■□□□□ 0.15
TRAPPC8-207ENST00000580104 CGNQ9P2M7 1197 aaKnown RBP15.98■□□□□ 0.15
TRAPPC8-207ENST00000580104 KIF18AQ8NI77 898 aa15.98■□□□□ 0.15
TRAPPC8-207ENST00000580104 PODXL2Q9NZ53 605 aa15.98■□□□□ 0.15
TRAPPC8-207ENST00000580104 MTMR7Q9Y216 660 aa15.98■□□□□ 0.15
TRAPPC8-207ENST00000580104 EVA1CP58658 441 aa15.97■□□□□ 0.15
TRAPPC8-207ENST00000580104 TTC39AQ5SRH9 613 aa15.97■□□□□ 0.15
TRAPPC8-207ENST00000580104 G2E3Q7L622 706 aa15.97■□□□□ 0.15
TRAPPC8-207ENST00000580104 DACT1Q9NYF0 836 aa15.97■□□□□ 0.15
TRAPPC8-207ENST00000580104 F13A1P00488 732 aa15.97■□□□□ 0.15
TRAPPC8-207ENST00000580104 AK2P54819 239 aa15.97■□□□□ 0.15
TRAPPC8-207ENST00000580104 EIF4A2Q14240 407 aaKnown RBP15.97■□□□□ 0.15
TRAPPC8-207ENST00000580104 ANO6Q4KMQ2 910 aa15.97■□□□□ 0.15
TRAPPC8-207ENST00000580104 USP19O94966 1318 aa15.97■□□□□ 0.15
TRAPPC8-207ENST00000580104 LRRC2Q9BYS8 371 aa15.97■□□□□ 0.15
TRAPPC8-207ENST00000580104 TMEM63CQ9P1W3 806 aa15.97■□□□□ 0.15
TRAPPC8-207ENST00000580104 FSD2A1L4K1 749 aa15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 CHMLP26374 656 aa15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 ANAPC15P60006 121 aa15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 JARID2Q92833 1246 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 DDX19AQ9NUU7 478 aaKnown RBP15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 CCP110O43303 1012 aa15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 V9GYY5 206 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 CCDC158Q5M9N0 1113 aa15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 ISM2Q6H9L7 571 aa15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 JMYQ8N9B5 988 aa15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 ANO10Q9NW15 660 aa15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 ATP8B2P98198 1209 aa15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 TMX1Q9H3N1 280 aa15.96■□□□□ 0.15
TRAPPC8-207ENST00000580104 DENND4BO75064 1496 aaPredicted RBP15.96■□□□□ 0.14
TRAPPC8-207ENST00000580104 GSPT1P15170 499 aaKnown RBP15.95■□□□□ 0.14
TRAPPC8-207ENST00000580104 ZNF445P59923 1031 aa15.95■□□□□ 0.14
TRAPPC8-207ENST00000580104 RBM33Q96EV2 1170 aaKnown RBP15.95■□□□□ 0.14
TRAPPC8-207ENST00000580104 MSH6P52701 1360 aa15.95■□□□□ 0.14
TRAPPC8-207ENST00000580104 URI1O94763 535 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC8-207ENST00000580104 FSIP1Q8NA03 581 aa15.95■□□□□ 0.14
TRAPPC8-207ENST00000580104 TSC1Q92574 1164 aa15.95■□□□□ 0.14
TRAPPC8-207ENST00000580104 ACEP12821 1306 aa15.95■□□□□ 0.14
TRAPPC8-207ENST00000580104 GADD45BO75293 160 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC8-207ENST00000580104 EVI5LQ96CN4 794 aa15.95■□□□□ 0.14
TRAPPC8-207ENST00000580104 VPS37DQ86XT2 251 aa15.94■□□□□ 0.14
TRAPPC8-207ENST00000580104 DNAJC25Q9H1X3 360 aa15.94■□□□□ 0.14
TRAPPC8-207ENST00000580104 MAP3K2Q9Y2U5 619 aa15.94■□□□□ 0.14
TRAPPC8-207ENST00000580104 BCORL1Q5H9F3 1711 aa15.94■□□□□ 0.14
TRAPPC8-207ENST00000580104 SYT1P21579 422 aa15.94■□□□□ 0.14
TRAPPC8-207ENST00000580104 PTGS1P23219 599 aa15.94■□□□□ 0.14
TRAPPC8-207ENST00000580104 NAP1L1P55209 391 aaKnown RBP15.94■□□□□ 0.14
TRAPPC8-207ENST00000580104 MYD88Q99836 296 aa15.94■□□□□ 0.14
TRAPPC8-207ENST00000580104 RAB11FIP4Q86YS3 637 aa15.94■□□□□ 0.14
TRAPPC8-207ENST00000580104 FAM200AQ8TCP9 573 aa15.94■□□□□ 0.14
TRAPPC8-207ENST00000580104 PTPRTO14522 1441 aa15.93■□□□□ 0.14
TRAPPC8-207ENST00000580104 PDIA4P13667 645 aaKnown RBP15.93■□□□□ 0.14
TRAPPC8-207ENST00000580104 CAGE1Q8TC20 777 aa15.93■□□□□ 0.14
TRAPPC8-207ENST00000580104 POLR3GO15318 223 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC8-207ENST00000580104 RBM8AQ9Y5S9 174 aaKnown RBP15.93■□□□□ 0.14
TRAPPC8-207ENST00000580104 VPS53Q5VIR6 699 aa15.93■□□□□ 0.14
TRAPPC8-207ENST00000580104 TBC1D2BQ9UPU7 963 aa15.93■□□□□ 0.14
TRAPPC8-207ENST00000580104 PA2G4Q9UQ80 394 aaKnown RBP15.93■□□□□ 0.14
TRAPPC8-207ENST00000580104 MTHFSDQ2M296 383 aaKnown RBP15.93■□□□□ 0.14
TRAPPC8-207ENST00000580104 ZC3H6P61129 1189 aaKnown RBP15.92■□□□□ 0.14
TRAPPC8-207ENST00000580104 CEP135Q66GS9 1140 aa15.92■□□□□ 0.14
TRAPPC8-207ENST00000580104 LUZP1Q86V48 1076 aa15.92■□□□□ 0.14
TRAPPC8-207ENST00000580104 CCAR1Q8IX12 1150 aaKnown RBP15.92■□□□□ 0.14
TRAPPC8-207ENST00000580104 ACBD3Q9H3P7 528 aa15.92■□□□□ 0.14
TRAPPC8-207ENST00000580104 FAM173BQ6P4H8 233 aa15.92■□□□□ 0.14
TRAPPC8-207ENST00000580104 TMCO3Q6UWJ1 677 aa15.92■□□□□ 0.14
TRAPPC8-207ENST00000580104 CHPF2Q9P2E5 772 aa15.92■□□□□ 0.14
TRAPPC8-207ENST00000580104 POLR3DP05423 398 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC8-207ENST00000580104 FILIP1LQ4L180 1135 aa15.92■□□□□ 0.14
TRAPPC8-207ENST00000580104 TMC6Q7Z403 805 aa15.92■□□□□ 0.14
TRAPPC8-207ENST00000580104 PPFIBP1Q86W92 1011 aa15.92■□□□□ 0.14
TRAPPC8-207ENST00000580104 NUP133Q8WUM0 1156 aa15.91■□□□□ 0.14
TRAPPC8-207ENST00000580104 BRF1Q92994 677 aa15.91■□□□□ 0.14
TRAPPC8-207ENST00000580104 CWC15Q9P013 229 aaKnown RBP15.91■□□□□ 0.14
TRAPPC8-207ENST00000580104 DBF4Q9UBU7 674 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC8-207ENST00000580104 INTS4Q96HW7 963 aaKnown RBP15.91■□□□□ 0.14
TRAPPC8-207ENST00000580104 CNNM1Q9NRU3 951 aa15.91■□□□□ 0.14
TRAPPC8-207ENST00000580104 CEP126Q9P2H0 1117 aa15.91■□□□□ 0.14
TRAPPC8-207ENST00000580104 TATP17735 454 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC8-207ENST00000580104 SART3Q15020 963 aaKnown RBP15.91■□□□□ 0.14
TRAPPC8-207ENST00000580104 TYRO3Q06418 890 aa15.91■□□□□ 0.14
TRAPPC8-207ENST00000580104 SMTNL1A8MU46 457 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms