RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 RFC4P35249 363 aa8.99□□□□□ -0.97
CCDC178-209ENST00000579947 KDRP35968 1356 aa8.99□□□□□ -0.97
CCDC178-209ENST00000579947 MAP3K19Q56UN5 1328 aa8.98□□□□□ -0.97
CCDC178-209ENST00000579947 PCDH11XQ9BZA7 1347 aa8.98□□□□□ -0.97
CCDC178-209ENST00000579947 PCDH11YQ9BZA8 1340 aa8.98□□□□□ -0.97
CCDC178-209ENST00000579947 POLRMTO00411 1230 aaKnown RBP8.98□□□□□ -0.97
CCDC178-209ENST00000579947 COL25A1Q9BXS0 654 aaPredicted RBP8.98□□□□□ -0.97
CCDC178-209ENST00000579947 ARFGEF2Q9Y6D5 1785 aa8.98□□□□□ -0.97
CCDC178-209ENST00000579947 CNTNAP4Q9C0A0 1308 aa8.98□□□□□ -0.97
CCDC178-209ENST00000579947 ATP6V1AP38606 617 aa8.98□□□□□ -0.97
CCDC178-209ENST00000579947 PIGBQ92521 554 aa8.98□□□□□ -0.97
CCDC178-209ENST00000579947 IP6K1Q92551 441 aa8.98□□□□□ -0.97
CCDC178-209ENST00000579947 RPS6KA4O75676 772 aa8.97□□□□□ -0.97
CCDC178-209ENST00000579947 SAPCD2Q86UD0 394 aa8.97□□□□□ -0.97
CCDC178-209ENST00000579947 AKAP4Q5JQC9 854 aa8.97□□□□□ -0.97
CCDC178-209ENST00000579947 TM4SF1P30408 202 aa8.96□□□□□ -0.97
CCDC178-209ENST00000579947 NOGQ13253 232 aa8.96□□□□□ -0.97
CCDC178-209ENST00000579947 PRDM6Q9NQX0 595 aa8.96□□□□□ -0.97
CCDC178-209ENST00000579947 BCORQ6W2J9 1755 aa8.96□□□□□ -0.98
CCDC178-209ENST00000579947 TAOK3Q9H2K8 898 aa8.96□□□□□ -0.98
CCDC178-209ENST00000579947 FMR1Q06787 632 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCDC178-209ENST00000579947 FKBP8Q14318 412 aa8.95□□□□□ -0.98
CCDC178-209ENST00000579947 OTUD5Q96G74 571 aa8.95□□□□□ -0.98
CCDC178-209ENST00000579947 STAC3Q96MF2 364 aa8.95□□□□□ -0.98
CCDC178-209ENST00000579947 USP42Q9H9J4 1324 aaKnown RBP8.95□□□□□ -0.98
CCDC178-209ENST00000579947 C2CD5Q86YS7 1000 aa8.94□□□□□ -0.98
CCDC178-209ENST00000579947 ZNF541Q9H0D2 1346 aa8.94□□□□□ -0.98
CCDC178-209ENST00000579947 PAPPA2Q9BXP8 1791 aa8.94□□□□□ -0.98
CCDC178-209ENST00000579947 AKAP11Q9UKA4 1901 aa8.94□□□□□ -0.98
CCDC178-209ENST00000579947 COL11A2P13942 1736 aaPredicted RBP8.93□□□□□ -0.98
CCDC178-209ENST00000579947 RNF186Q9NXI6 227 aa8.93□□□□□ -0.98
CCDC178-209ENST00000579947 H0YIN7 160 aa8.92□□□□□ -0.98
CCDC178-209ENST00000579947 NKX1-1Q15270 411 aaPredicted RBP8.92□□□□□ -0.98
CCDC178-209ENST00000579947 LTV1Q96GA3 475 aaPredicted RBP8.92□□□□□ -0.98
CCDC178-209ENST00000579947 KTN1Q86UP2 1357 aaKnown RBP8.92□□□□□ -0.98
CCDC178-209ENST00000579947 ANKRD31Q8N7Z5 1873 aa8.92□□□□□ -0.98
CCDC178-209ENST00000579947 ZIC5Q96T25 663 aa8.92□□□□□ -0.98
CCDC178-209ENST00000579947 PDZRN3Q9UPQ7 1066 aa8.92□□□□□ -0.98
CCDC178-209ENST00000579947 MYH14Q7Z406 1995 aaKnown RBP8.92□□□□□ -0.98
CCDC178-209ENST00000579947 TRAF5O00463 557 aa8.91□□□□□ -0.98
CCDC178-209ENST00000579947 C21orf2O43822 256 aa8.91□□□□□ -0.98
CCDC178-209ENST00000579947 TATP17735 454 aaPredicted RBP8.91□□□□□ -0.98
CCDC178-209ENST00000579947 MPHOSPH9Q99550 1183 aa8.91□□□□□ -0.98
CCDC178-209ENST00000579947 SRP68Q9UHB9 627 aaKnown RBP8.91□□□□□ -0.98
CCDC178-209ENST00000579947 CYP27B1O15528 508 aa8.91□□□□□ -0.98
CCDC178-209ENST00000579947 SOGA3Q5TF21 947 aa8.91□□□□□ -0.98
CCDC178-209ENST00000579947 FBXO46Q6PJ61 603 aaPredicted RBP8.91□□□□□ -0.98
CCDC178-209ENST00000579947 RNF123Q5XPI4 1314 aa8.91□□□□□ -0.98
CCDC178-209ENST00000579947 RAPGEF4Q8WZA2 1011 aa8.91□□□□□ -0.98
CCDC178-209ENST00000579947 ASAP1Q9ULH1 1129 aa8.91□□□□□ -0.98
CCDC178-209ENST00000579947 PLA2G5P39877 138 aa8.9□□□□□ -0.98
CCDC178-209ENST00000579947 LAMB4A4D0S4 1761 aa8.9□□□□□ -0.98
CCDC178-209ENST00000579947 CUL9Q8IWT3 2517 aa8.9□□□□□ -0.99
CCDC178-209ENST00000579947 ATG3Q9NT62 314 aa8.9□□□□□ -0.99
CCDC178-209ENST00000579947 CENPJQ9HC77 1338 aaPredicted RBP8.9□□□□□ -0.99
CCDC178-209ENST00000579947 CELF2O95319 508 aaKnown RBP8.89□□□□□ -0.99
CCDC178-209ENST00000579947 GPC2Q8N158 579 aa8.89□□□□□ -0.99
CCDC178-209ENST00000579947 TMOD3Q9NYL9 352 aa8.89□□□□□ -0.99
CCDC178-209ENST00000579947 FAM155AB1AL88 458 aaPredicted RBP8.89□□□□□ -0.99
CCDC178-209ENST00000579947 BICDL1Q6ZP65 573 aa8.89□□□□□ -0.99
CCDC178-209ENST00000579947 USP50Q70EL3 339 aaPredicted RBP8.89□□□□□ -0.99
CCDC178-209ENST00000579947 TRPA1O75762 1119 aa8.88□□□□□ -0.99
CCDC178-209ENST00000579947 COL9A1P20849 921 aa8.88□□□□□ -0.99
CCDC178-209ENST00000579947 SLC4A9Q96Q91 983 aa8.88□□□□□ -0.99
CCDC178-209ENST00000579947 CACNA1SQ13698 1873 aa8.88□□□□□ -0.99
CCDC178-209ENST00000579947 CARMIL3Q8ND23 1372 aa8.88□□□□□ -0.99
CCDC178-209ENST00000579947 HOXC9P31274 260 aa8.88□□□□□ -0.99
CCDC178-209ENST00000579947 INTS3Q68E01 1043 aaKnown RBP8.88□□□□□ -0.99
CCDC178-209ENST00000579947 SLX4Q8IY92 1834 aa8.88□□□□□ -0.99
CCDC178-209ENST00000579947 POTEFA5A3E0 1075 aa8.87□□□□□ -0.99
CCDC178-209ENST00000579947 FZD9O00144 591 aa8.87□□□□□ -0.99
CCDC178-209ENST00000579947 NME9Q86XW9 330 aa8.87□□□□□ -0.99
CCDC178-209ENST00000579947 RTL1A6NKG5 1358 aa8.87□□□□□ -0.99
CCDC178-209ENST00000579947 HOXD11P31277 338 aaPredicted RBP8.87□□□□□ -0.99
CCDC178-209ENST00000579947 TJP1Q07157 1748 aa8.87□□□□□ -0.99
CCDC178-209ENST00000579947 KIF23Q02241 960 aaPredicted RBP8.87□□□□□ -0.99
CCDC178-209ENST00000579947 NBPF6Q5VWK0 638 aa8.87□□□□□ -0.99
CCDC178-209ENST00000579947 NBPF4Q96M43 638 aa8.87□□□□□ -0.99
CCDC178-209ENST00000579947 SBNO2Q9Y2G9 1366 aa8.86□□□□□ -0.99
CCDC178-209ENST00000579947 H0YGN5 161 aa8.86□□□□□ -0.99
CCDC178-209ENST00000579947 REM2Q8IYK8 340 aaPredicted RBP8.86□□□□□ -0.99
CCDC178-209ENST00000579947 RBM27Q9P2N5 1060 aaKnown RBP8.86□□□□□ -0.99
CCDC178-209ENST00000579947 HDAC9Q9UKV0 1011 aa8.86□□□□□ -0.99
CCDC178-209ENST00000579947 KDM2AQ9Y2K7 1162 aa8.86□□□□□ -0.99
CCDC178-209ENST00000579947 ERBB4Q15303 1308 aa8.86□□□□□ -0.99
CCDC178-209ENST00000579947 SERPINB2P05120 415 aa8.86□□□□□ -0.99
CCDC178-209ENST00000579947 LMOD1P29536 600 aaPredicted RBP8.86□□□□□ -0.99
CCDC178-209ENST00000579947 NFIXQ14938 502 aa8.86□□□□□ -0.99
CCDC178-209ENST00000579947 CHRDL2Q6WN34 429 aa8.86□□□□□ -0.99
CCDC178-209ENST00000579947 DCAF11Q8TEB1 546 aa8.86□□□□□ -0.99
CCDC178-209ENST00000579947 ZNF622Q969S3 477 aaKnown RBP eCLIP8.85□□□□□ -0.99
CCDC178-209ENST00000579947 EVC2Q86UK5 1308 aa8.85□□□□□ -0.99
CCDC178-209ENST00000579947 NOM1Q5C9Z4 860 aaKnown RBP8.85□□□□□ -0.99
CCDC178-209ENST00000579947 FKBP4Q02790 459 aaKnown RBP eCLIP8.84□□□□□ -0.99
CCDC178-209ENST00000579947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.84□□□□□ -0.99
CCDC178-209ENST00000579947 CCDC102AQ96A19 550 aa8.84□□□□□ -0.99
CCDC178-209ENST00000579947 FAM122AQ96E09 287 aa8.84□□□□□ -0.99
CCDC178-209ENST00000579947 PRO3102Q9H379 93 aa8.84□□□□□ -0.99
CCDC178-209ENST00000579947 STXBP5LQ9Y2K9 1186 aa8.84□□□□□ -0.99
CCDC178-209ENST00000579947 STYK1Q6J9G0 422 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms