RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 DHX37Q8IY37 1157 aaKnown RBP4.74□□□□□ -1.65
CDH19-204ENST00000579658 IP6K1Q92551 441 aa4.74□□□□□ -1.65
CDH19-204ENST00000579658 WBP1LQ9NX94 342 aa4.74□□□□□ -1.65
CDH19-204ENST00000579658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.73□□□□□ -1.65
CDH19-204ENST00000579658 CLSPNQ9HAW4 1339 aa4.73□□□□□ -1.65
CDH19-204ENST00000579658 CEP350Q5VT06 3117 aa4.73□□□□□ -1.65
CDH19-204ENST00000579658 MMP10P09238 476 aa4.73□□□□□ -1.65
CDH19-204ENST00000579658 HSPA8P11142 646 aaKnown RBP4.73□□□□□ -1.65
CDH19-204ENST00000579658 LMNB1P20700 586 aa4.73□□□□□ -1.65
CDH19-204ENST00000579658 DPY19L2Q6NUT2 758 aa4.73□□□□□ -1.65
CDH19-204ENST00000579658 PARP3Q9Y6F1 533 aa4.73□□□□□ -1.65
CDH19-204ENST00000579658 EDC4Q6P2E9 1401 aaKnown RBP4.73□□□□□ -1.65
CDH19-204ENST00000579658 ROCK2O75116 1388 aaKnown RBP4.72□□□□□ -1.65
CDH19-204ENST00000579658 CA12O43570 354 aa4.72□□□□□ -1.65
CDH19-204ENST00000579658 DPEP1P16444 411 aa4.72□□□□□ -1.65
CDH19-204ENST00000579658 TMF1P82094 1093 aa4.72□□□□□ -1.65
CDH19-204ENST00000579658 PRPF38BQ5VTL8 546 aaKnown RBP4.72□□□□□ -1.65
CDH19-204ENST00000579658 CABP2Q9NPB3 220 aa4.72□□□□□ -1.65
CDH19-204ENST00000579658 PDZRN3Q9UPQ7 1066 aa4.72□□□□□ -1.65
CDH19-204ENST00000579658 COL5A3P25940 1745 aaPredicted RBP4.72□□□□□ -1.65
CDH19-204ENST00000579658 RC3H1Q5TC82 1133 aaKnown RBP4.72□□□□□ -1.65
CDH19-204ENST00000579658 CARD11Q9BXL7 1154 aa4.72□□□□□ -1.65
CDH19-204ENST00000579658 KIF24Q5T7B8 1368 aa4.72□□□□□ -1.65
CDH19-204ENST00000579658 SBNO2Q9Y2G9 1366 aa4.72□□□□□ -1.65
CDH19-204ENST00000579658 MEGF6O75095 1541 aa4.72□□□□□ -1.65
CDH19-204ENST00000579658 A0A0G2JLW4 131 aa4.71□□□□□ -1.65
CDH19-204ENST00000579658 TATP17735 454 aaPredicted RBP4.71□□□□□ -1.65
CDH19-204ENST00000579658 IQCA1LA6NCM1 817 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 RASSF10A6NK89 507 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 CCDC85CA6NKD9 419 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 TMEM88BA6NKF7 163 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 ECE1P42892 770 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 LBX1P52954 281 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 KCNQ4P56696 695 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 NEUROD2Q15784 382 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 LDHDQ86WU2 507 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 RAPGEF4Q8WZA2 1011 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 BEGAINQ9BUH8 593 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 BCL11AQ9H165 835 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 PASKQ96RG2 1323 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 NRXN2Q9P2S2 1712 aa4.71□□□□□ -1.66
CDH19-204ENST00000579658 ZNF316A6NFI3 1004 aaPredicted RBP4.7□□□□□ -1.66
CDH19-204ENST00000579658 IGSF3O75054 1194 aa4.7□□□□□ -1.66
CDH19-204ENST00000579658 CENPBP07199 599 aaPredicted RBP4.7□□□□□ -1.66
CDH19-204ENST00000579658 TRAPPC3LQ5T215 181 aa4.7□□□□□ -1.66
CDH19-204ENST00000579658 HDGFL2Q7Z4V5 671 aaPredicted RBP4.7□□□□□ -1.66
CDH19-204ENST00000579658 PUS7Q96PZ0 661 aaKnown RBP4.7□□□□□ -1.66
CDH19-204ENST00000579658 MKRN1Q9UHC7 482 aaKnown RBP4.7□□□□□ -1.66
CDH19-204ENST00000579658 RTCBQ9Y3I0 505 aaKnown RBP4.7□□□□□ -1.66
CDH19-204ENST00000579658 CCDC88AQ3V6T2 1871 aa4.7□□□□□ -1.66
CDH19-204ENST00000579658 CNTNAP4Q9C0A0 1308 aa4.7□□□□□ -1.66
CDH19-204ENST00000579658 RGPD2P0DJD1 1756 aa4.7□□□□□ -1.66
CDH19-204ENST00000579658 ST20-MTHFSA0A0A6YYL1 179 aa4.7□□□□□ -1.66
CDH19-204ENST00000579658 PHF14O94880 888 aa4.7□□□□□ -1.66
CDH19-204ENST00000579658 KCNA3P22001 575 aa4.7□□□□□ -1.66
CDH19-204ENST00000579658 ARID3AQ99856 593 aa4.7□□□□□ -1.66
CDH19-204ENST00000579658 CHMP4AQ9BY43 222 aa4.7□□□□□ -1.66
CDH19-204ENST00000579658 SLC24A3Q9HC58 644 aa4.7□□□□□ -1.66
CDH19-204ENST00000579658 CIZ1Q9ULV3 898 aaPredicted RBP4.7□□□□□ -1.66
CDH19-204ENST00000579658 ARFGEF2Q9Y6D5 1785 aa4.7□□□□□ -1.66
CDH19-204ENST00000579658 LTBP3Q9NS15 1303 aa4.7□□□□□ -1.66
CDH19-204ENST00000579658 ADAMTSL1Q8N6G6 1762 aa4.69□□□□□ -1.66
CDH19-204ENST00000579658 LOC102724428A0A0B4J2F2 783 aa4.69□□□□□ -1.66
CDH19-204ENST00000579658 GNPATO15228 680 aa4.69□□□□□ -1.66
CDH19-204ENST00000579658 SOX12O15370 315 aa4.69□□□□□ -1.66
CDH19-204ENST00000579658 SIK1P57059 783 aa4.69□□□□□ -1.66
CDH19-204ENST00000579658 KCNV2Q8TDN2 545 aa4.69□□□□□ -1.66
CDH19-204ENST00000579658 NECTIN2Q92692 538 aa4.69□□□□□ -1.66
CDH19-204ENST00000579658 ANKRD26Q9UPS8 1709 aa4.69□□□□□ -1.66
CDH19-204ENST00000579658 VEGFBP49765 207 aa4.69□□□□□ -1.66
CDH19-204ENST00000579658 ZC3H15Q8WU90 426 aaKnown RBP4.69□□□□□ -1.66
CDH19-204ENST00000579658 KDRP35968 1356 aa4.69□□□□□ -1.66
CDH19-204ENST00000579658 FER1L6Q2WGJ9 1857 aa4.69□□□□□ -1.66
CDH19-204ENST00000579658 DEFB115Q30KQ5 88 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 SOGA3Q5TF21 947 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 LINC00116Q8NCU8 138 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 TESK2Q96S53 571 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 TERF2IPQ9NYB0 399 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.68□□□□□ -1.66
CDH19-204ENST00000579658 INSRP06213 1382 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 NCAPD2Q15021 1401 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 LTBP1Q14766 1721 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 RPS6KA4O75676 772 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 HSPA5P11021 654 aaKnown RBP4.68□□□□□ -1.66
CDH19-204ENST00000579658 GYS1P13807 737 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 HOXC9P31274 260 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 RFC4P35249 363 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 L3MBTL3Q96JM7 780 aaPredicted RBP4.68□□□□□ -1.66
CDH19-204ENST00000579658 ZMYND15Q9H091 742 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 WDR33Q9C0J8 1336 aaKnown RBP4.68□□□□□ -1.66
CDH19-204ENST00000579658 TRPM7Q96QT4 1865 aa4.68□□□□□ -1.66
CDH19-204ENST00000579658 MAP2K2P36507 400 aa4.67□□□□□ -1.66
CDH19-204ENST00000579658 AMPHP49418 695 aa4.67□□□□□ -1.66
CDH19-204ENST00000579658 MPRIPQ6WCQ1 1025 aa4.67□□□□□ -1.66
CDH19-204ENST00000579658 TMOD3Q9NYL9 352 aa4.67□□□□□ -1.66
CDH19-204ENST00000579658 SPG7Q9UQ90 795 aa4.67□□□□□ -1.66
CDH19-204ENST00000579658 ATP6V1AP38606 617 aa4.67□□□□□ -1.66
CDH19-204ENST00000579658 PNMA8AQ86V59 439 aaPredicted RBP4.67□□□□□ -1.66
CDH19-204ENST00000579658 TTLL6Q8N841 843 aa4.67□□□□□ -1.66
CDH19-204ENST00000579658 WASHC2AQ641Q2 1341 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms