RNA–Protein interactions for RNA: ENST00000579128.1

TYMS-204, Transcript of thymidylate synthetase, humanhuman

TSL 2

Gene TYMS, Length 925 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-204ENST00000579128 KCPQ6ZWJ8 1503 aa16.86■□□□□ 0.29
TYMS-204ENST00000579128 CANXP27824 592 aaKnown RBP16.85■□□□□ 0.29
TYMS-204ENST00000579128 FKBP8Q14318 412 aa16.85■□□□□ 0.29
TYMS-204ENST00000579128 USPL1Q5W0Q7 1092 aa16.85■□□□□ 0.29
TYMS-204ENST00000579128 SRP68Q9UHB9 627 aaKnown RBP16.85■□□□□ 0.29
TYMS-204ENST00000579128 ZBTB1Q9Y2K1 713 aa16.85■□□□□ 0.29
TYMS-204ENST00000579128 COL15A1P39059 1388 aa16.85■□□□□ 0.29
TYMS-204ENST00000579128 C10orf71Q711Q0 1435 aa16.85■□□□□ 0.29
TYMS-204ENST00000579128 TM4SF1P30408 202 aa16.84■□□□□ 0.29
TYMS-204ENST00000579128 IL6STP40189 918 aaPredicted RBP16.84■□□□□ 0.29
TYMS-204ENST00000579128 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
TYMS-204ENST00000579128 C4AP0C0L4 1744 aa16.84■□□□□ 0.29
TYMS-204ENST00000579128 EIF5P55010 431 aaKnown RBP16.83■□□□□ 0.28
TYMS-204ENST00000579128 TAF7Q15545 349 aaPredicted RBP16.83■□□□□ 0.28
TYMS-204ENST00000579128 PIM2Q9P1W9 311 aa16.83■□□□□ 0.28
TYMS-204ENST00000579128 MAPK8IP3Q9UPT6 1336 aa16.83■□□□□ 0.28
TYMS-204ENST00000579128 BCS1LQ9Y276 419 aa16.83■□□□□ 0.28
TYMS-204ENST00000579128 UBR2Q8IWV8 1755 aa16.82■□□□□ 0.28
TYMS-204ENST00000579128 A0A0G2JLW4 131 aa16.82■□□□□ 0.28
TYMS-204ENST00000579128 SNRPA1P09661 255 aaKnown RBP16.82■□□□□ 0.28
TYMS-204ENST00000579128 KIF13BQ9NQT8 1826 aa16.82■□□□□ 0.28
TYMS-204ENST00000579128 GOLGB1Q14789 3259 aaKnown RBP16.81■□□□□ 0.28
TYMS-204ENST00000579128 POLRMTO00411 1230 aaKnown RBP16.81■□□□□ 0.28
TYMS-204ENST00000579128 MCM10Q7L590 875 aa16.81■□□□□ 0.28
TYMS-204ENST00000579128 PDZRN3Q9UPQ7 1066 aa16.81■□□□□ 0.28
TYMS-204ENST00000579128 PXDNLA1KZ92 1463 aa16.8■□□□□ 0.28
TYMS-204ENST00000579128 GIGYF1O75420 1035 aaPredicted RBP16.8■□□□□ 0.28
TYMS-204ENST00000579128 DPEP1P16444 411 aa16.8■□□□□ 0.28
TYMS-204ENST00000579128 DDX10Q13206 875 aaKnown RBP16.8■□□□□ 0.28
TYMS-204ENST00000579128 DDR1Q08345 913 aa16.79■□□□□ 0.28
TYMS-204ENST00000579128 NFIXQ14938 502 aa16.79■□□□□ 0.28
TYMS-204ENST00000579128 DALRD3Q5D0E6 543 aaKnown RBP16.79■□□□□ 0.28
TYMS-204ENST00000579128 ZNF330Q9Y3S2 320 aaPredicted RBP16.79■□□□□ 0.28
TYMS-204ENST00000579128 SERPINB2P05120 415 aa16.78■□□□□ 0.28
TYMS-204ENST00000579128 NFE2L2Q16236 605 aa16.78■□□□□ 0.28
TYMS-204ENST00000579128 WWC3Q9ULE0 1092 aa16.78■□□□□ 0.28
TYMS-204ENST00000579128 SIPA1L3O60292 1781 aaPredicted RBP16.78■□□□□ 0.28
TYMS-204ENST00000579128 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.28
TYMS-204ENST00000579128 ARHGAP27Q6ZUM4 889 aa16.77■□□□□ 0.28
TYMS-204ENST00000579128 GPBP1L1Q9HC44 474 aaPredicted RBP16.77■□□□□ 0.28
TYMS-204ENST00000579128 ZNF652Q9Y2D9 606 aa16.77■□□□□ 0.28
TYMS-204ENST00000579128 MYBBP1AQ9BQG0 1328 aaKnown RBP16.76■□□□□ 0.27
TYMS-204ENST00000579128 RGL2O15211 777 aa16.76■□□□□ 0.27
TYMS-204ENST00000579128 NPHP1O15259 732 aa16.76■□□□□ 0.27
TYMS-204ENST00000579128 LMOD3Q0VAK6 560 aa16.76■□□□□ 0.27
TYMS-204ENST00000579128 CLEC4GQ6UXB4 293 aa16.76■□□□□ 0.27
TYMS-204ENST00000579128 PLEKHF1Q96S99 279 aa16.76■□□□□ 0.27
TYMS-204ENST00000579128 SETDB2Q96T68 719 aa16.76■□□□□ 0.27
TYMS-204ENST00000579128 H0YIN7 160 aa16.75■□□□□ 0.27
TYMS-204ENST00000579128 A1BGP04217 495 aa16.75■□□□□ 0.27
TYMS-204ENST00000579128 DCTN1Q14203 1278 aa16.75■□□□□ 0.27
TYMS-204ENST00000579128 DZIP3Q86Y13 1208 aaKnown RBP16.75■□□□□ 0.27
TYMS-204ENST00000579128 TBC1D2BQ9UPU7 963 aa16.75■□□□□ 0.27
TYMS-204ENST00000579128 ATP10DQ9P241 1426 aa16.74■□□□□ 0.27
TYMS-204ENST00000579128 KCNQ3O43525 872 aa16.74■□□□□ 0.27
TYMS-204ENST00000579128 KCNA3P22001 575 aa16.74■□□□□ 0.27
TYMS-204ENST00000579128 PDE6BP35913 854 aa16.74■□□□□ 0.27
TYMS-204ENST00000579128 BCL2L12Q9HB09 334 aa16.74■□□□□ 0.27
TYMS-204ENST00000579128 USP16Q9Y5T5 823 aa16.74■□□□□ 0.27
TYMS-204ENST00000579128 CARMIL3Q8ND23 1372 aa16.74■□□□□ 0.27
TYMS-204ENST00000579128 WDR43Q15061 677 aaKnown RBP eCLIP16.73■□□□□ 0.27
TYMS-204ENST00000579128 BICDL1Q6ZP65 573 aa16.73■□□□□ 0.27
TYMS-204ENST00000579128 BABAM1Q9NWV8 329 aa16.73■□□□□ 0.27
TYMS-204ENST00000579128 N4BP2Q86UW6 1770 aaPredicted RBP16.73■□□□□ 0.27
TYMS-204ENST00000579128 BRIP1Q9BX63 1249 aa16.72■□□□□ 0.27
TYMS-204ENST00000579128 ADCY9O60503 1353 aa16.72■□□□□ 0.27
TYMS-204ENST00000579128 CAMTA2O94983 1202 aa16.71■□□□□ 0.27
TYMS-204ENST00000579128 CHRNA5P30532 468 aa16.71■□□□□ 0.27
TYMS-204ENST00000579128 RIPK4P57078 832 aa16.71■□□□□ 0.27
TYMS-204ENST00000579128 ST5P78524 1137 aa16.71■□□□□ 0.27
TYMS-204ENST00000579128 TBC1D9BQ66K14 1250 aa16.71■□□□□ 0.27
TYMS-204ENST00000579128 TTLL6Q8N841 843 aa16.71■□□□□ 0.27
TYMS-204ENST00000579128 C2CD5Q86YS7 1000 aa16.7■□□□□ 0.26
TYMS-204ENST00000579128 CNBD1Q8NA66 436 aa16.7■□□□□ 0.26
TYMS-204ENST00000579128 KIAA1551Q9HCM1 1747 aa16.69■□□□□ 0.26
TYMS-204ENST00000579128 ARFGEF1Q9Y6D6 1849 aa16.68■□□□□ 0.26
TYMS-204ENST00000579128 BRCA1P38398 1863 aaKnown RBP16.68■□□□□ 0.26
TYMS-204ENST00000579128 TPTE2Q6XPS3 522 aa16.68■□□□□ 0.26
TYMS-204ENST00000579128 MIS18AQ9NYP9 233 aa16.68■□□□□ 0.26
TYMS-204ENST00000579128 ERBB4Q15303 1308 aa16.68■□□□□ 0.26
TYMS-204ENST00000579128 NRXN2Q9P2S2 1712 aa16.67■□□□□ 0.26
TYMS-204ENST00000579128 TMPOP42166 694 aaKnown RBP16.67■□□□□ 0.26
TYMS-204ENST00000579128 EIF4A1P60842 406 aaKnown RBP16.67■□□□□ 0.26
TYMS-204ENST00000579128 PRR5LQ6MZQ0 368 aa16.67■□□□□ 0.26
TYMS-204ENST00000579128 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
TYMS-204ENST00000579128 RUNDC1Q96C34 613 aa16.67■□□□□ 0.26
TYMS-204ENST00000579128 TSPYL4Q9UJ04 414 aa16.67■□□□□ 0.26
TYMS-204ENST00000579128 AFDNP55196 1824 aaKnown RBP16.67■□□□□ 0.26
TYMS-204ENST00000579128 DLG5Q8TDM6 1919 aa16.66■□□□□ 0.26
TYMS-204ENST00000579128 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
TYMS-204ENST00000579128 ERVV-1B6SEH8 477 aa16.66■□□□□ 0.26
TYMS-204ENST00000579128 C9orf131Q5VYM1 1079 aa16.66■□□□□ 0.26
TYMS-204ENST00000579128 KIF6Q6ZMV9 814 aa16.66■□□□□ 0.26
TYMS-204ENST00000579128 ZNF526Q8TF50 670 aaPredicted RBP16.66■□□□□ 0.26
TYMS-204ENST00000579128 CNKSR1Q969H4 720 aa16.66■□□□□ 0.26
TYMS-204ENST00000579128 PRKRIP1Q9H875 184 aaPredicted RBP16.66■□□□□ 0.26
TYMS-204ENST00000579128 ZC3H4Q9UPT8 1303 aaKnown RBP16.66■□□□□ 0.26
TYMS-204ENST00000579128 NBPF26B4DH59 902 aa16.65■□□□□ 0.26
TYMS-204ENST00000579128 GTF2E1P29083 439 aaPredicted RBP16.65■□□□□ 0.26
TYMS-204ENST00000579128 SOGA3Q5TF21 947 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms