RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 ERCC3P19447 782 aa6.74□□□□□ -1.33
GAPLINC-202ENST00000579007 CARD10Q9BWT7 1032 aa6.74□□□□□ -1.33
GAPLINC-202ENST00000579007 TSPYL2Q9H2G4 693 aaPredicted RBP6.74□□□□□ -1.33
GAPLINC-202ENST00000579007 TONSLQ96HA7 1378 aa6.73□□□□□ -1.33
GAPLINC-202ENST00000579007 RFC5P40937 340 aa6.73□□□□□ -1.33
GAPLINC-202ENST00000579007 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.73□□□□□ -1.33
GAPLINC-202ENST00000579007 KCNH5Q8NCM2 988 aa6.73□□□□□ -1.33
GAPLINC-202ENST00000579007 TESK2Q96S53 571 aa6.73□□□□□ -1.33
GAPLINC-202ENST00000579007 CARD11Q9BXL7 1154 aa6.73□□□□□ -1.33
GAPLINC-202ENST00000579007 VRTNQ9H8Y1 702 aa6.73□□□□□ -1.33
GAPLINC-202ENST00000579007 GPCPD1Q9NPB8 672 aa6.73□□□□□ -1.33
GAPLINC-202ENST00000579007 GNEQ9Y223 722 aaKnown RBP6.73□□□□□ -1.33
GAPLINC-202ENST00000579007 GRXCR2A6NFK2 248 aa6.72□□□□□ -1.33
GAPLINC-202ENST00000579007 PLSCR1O15162 318 aa6.72□□□□□ -1.33
GAPLINC-202ENST00000579007 KCNQ2O43526 872 aa6.72□□□□□ -1.33
GAPLINC-202ENST00000579007 OSBPP22059 807 aa6.72□□□□□ -1.33
GAPLINC-202ENST00000579007 SSTR3P32745 418 aaPredicted RBP6.72□□□□□ -1.33
GAPLINC-202ENST00000579007 SLC12A5Q9H2X9 1139 aa6.72□□□□□ -1.33
GAPLINC-202ENST00000579007 GDPD2Q9HCC8 539 aa6.72□□□□□ -1.33
GAPLINC-202ENST00000579007 CLEC11AQ9Y240 323 aa6.72□□□□□ -1.33
GAPLINC-202ENST00000579007 RTL1A6NKG5 1358 aa6.71□□□□□ -1.33
GAPLINC-202ENST00000579007 ANKRD36BQ8N2N9 1353 aa6.71□□□□□ -1.33
GAPLINC-202ENST00000579007 CEP350Q5VT06 3117 aa6.71□□□□□ -1.34
GAPLINC-202ENST00000579007 C4BP0C0L5 1744 aa6.71□□□□□ -1.34
GAPLINC-202ENST00000579007 COL5A3P25940 1745 aaPredicted RBP6.71□□□□□ -1.34
GAPLINC-202ENST00000579007 KIAA1551Q9HCM1 1747 aa6.71□□□□□ -1.34
GAPLINC-202ENST00000579007 NCAPD2Q15021 1401 aa6.71□□□□□ -1.34
GAPLINC-202ENST00000579007 PTGER2P43116 358 aa6.71□□□□□ -1.34
GAPLINC-202ENST00000579007 DRC1Q96MC2 740 aa6.71□□□□□ -1.34
GAPLINC-202ENST00000579007 BEGAINQ9BUH8 593 aa6.71□□□□□ -1.34
GAPLINC-202ENST00000579007 CDCA7Q9BWT1 371 aaPredicted RBP6.71□□□□□ -1.34
GAPLINC-202ENST00000579007 POLR3EQ9NVU0 708 aa6.71□□□□□ -1.34
GAPLINC-202ENST00000579007 USP47Q96K76 1375 aa6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 C4AP0C0L4 1744 aa6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 POM121CA8CG34 1229 aa6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 C11orf95C9JLR9 678 aaPredicted RBP6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 BRD2P25440 801 aaKnown RBP6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 TXNRD1Q16881 649 aa6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 ZNF827Q17R98 1081 aa6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 NBPF14Q5TI25 921 aa6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 PPP2R2DQ66LE6 453 aa6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 ANKRD24Q8TF21 1146 aa6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 MRRFQ96E11 262 aaKnown RBP6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 ACSBG1Q96GR2 724 aa6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 KIAA1522Q9P206 1035 aaPredicted RBP6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 MAP3K19Q56UN5 1328 aa6.7□□□□□ -1.34
GAPLINC-202ENST00000579007 ZBTB7AO95365 584 aa6.69□□□□□ -1.34
GAPLINC-202ENST00000579007 IL2RBP14784 551 aa6.69□□□□□ -1.34
GAPLINC-202ENST00000579007 CLK2P49760 499 aaKnown RBP6.69□□□□□ -1.34
GAPLINC-202ENST00000579007 MYSM1Q5VVJ2 828 aa6.69□□□□□ -1.34
GAPLINC-202ENST00000579007 B4GALNT3Q6L9W6 998 aa6.69□□□□□ -1.34
GAPLINC-202ENST00000579007 MTMR14Q8NCE2 650 aa6.69□□□□□ -1.34
GAPLINC-202ENST00000579007 TMC1Q8TDI8 760 aa6.69□□□□□ -1.34
GAPLINC-202ENST00000579007 SPATA32Q96LK8 384 aa6.69□□□□□ -1.34
GAPLINC-202ENST00000579007 POLR3GLQ9BT43 218 aa6.69□□□□□ -1.34
GAPLINC-202ENST00000579007 SPON1Q9HCB6 807 aa6.69□□□□□ -1.34
GAPLINC-202ENST00000579007 KIF13BQ9NQT8 1826 aa6.69□□□□□ -1.34
GAPLINC-202ENST00000579007 BRCA1P38398 1863 aaKnown RBP6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 ST20-MTHFSA0A0A6YYL1 179 aa6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 FBLN1P23142 703 aa6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 HOXC9P31274 260 aa6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 ABL2P42684 1182 aa6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 PTGDRQ13258 359 aa6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 SLC15A2Q16348 729 aa6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 HDGFL2Q7Z4V5 671 aaPredicted RBP6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 SREK1Q8WXA9 508 aaKnown RBP6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 LRRC4BQ9NT99 713 aa6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 NLRP2Q9NX02 1062 aa6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 CICQ96RK0 1608 aaPredicted RBP6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 MAP3K5Q99683 1374 aa6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 ZNF831Q5JPB2 1677 aa6.68□□□□□ -1.34
GAPLINC-202ENST00000579007 NSD3Q9BZ95 1437 aa6.67□□□□□ -1.34
GAPLINC-202ENST00000579007 EXOC5O00471 708 aa6.67□□□□□ -1.34
GAPLINC-202ENST00000579007 NCLP19338 710 aaKnown RBP6.67□□□□□ -1.34
GAPLINC-202ENST00000579007 RFX1P22670 979 aa6.67□□□□□ -1.34
GAPLINC-202ENST00000579007 DIXDC1Q155Q3 683 aa6.67□□□□□ -1.34
GAPLINC-202ENST00000579007 IFNL1Q8IU54 200 aa6.67□□□□□ -1.34
GAPLINC-202ENST00000579007 IP6K1Q92551 441 aa6.67□□□□□ -1.34
GAPLINC-202ENST00000579007 PPP1R1BQ9UD71 204 aaPredicted RBP6.67□□□□□ -1.34
GAPLINC-202ENST00000579007 TJP1Q07157 1748 aa6.67□□□□□ -1.34
GAPLINC-202ENST00000579007 MDM2Q00987 491 aaPredicted RBP6.66□□□□□ -1.34
GAPLINC-202ENST00000579007 DSG2Q14126 1118 aa6.66□□□□□ -1.34
GAPLINC-202ENST00000579007 TSR1Q2NL82 804 aaKnown RBP6.66□□□□□ -1.34
GAPLINC-202ENST00000579007 LTV1Q96GA3 475 aaPredicted RBP6.66□□□□□ -1.34
GAPLINC-202ENST00000579007 STK32BQ9NY57 414 aa6.66□□□□□ -1.34
GAPLINC-202ENST00000579007 TERF2IPQ9NYB0 399 aa6.66□□□□□ -1.34
GAPLINC-202ENST00000579007 PNPLA7Q6ZV29 1317 aa6.66□□□□□ -1.34
GAPLINC-202ENST00000579007 SCN11AQ9UI33 1791 aa6.66□□□□□ -1.34
GAPLINC-202ENST00000579007 ADAMTS7Q9UKP4 1686 aa6.65□□□□□ -1.34
GAPLINC-202ENST00000579007 TMEM88BA6NKF7 163 aa6.65□□□□□ -1.34
GAPLINC-202ENST00000579007 ATG7O95352 703 aa6.65□□□□□ -1.34
GAPLINC-202ENST00000579007 TCF3P15923 654 aa6.65□□□□□ -1.34
GAPLINC-202ENST00000579007 YY1P25490 414 aa6.65□□□□□ -1.34
GAPLINC-202ENST00000579007 RRS1Q15050 365 aaKnown RBP6.65□□□□□ -1.34
GAPLINC-202ENST00000579007 HDGFL1Q5TGJ6 251 aa6.65□□□□□ -1.34
GAPLINC-202ENST00000579007 USHBP1Q8N6Y0 703 aa6.65□□□□□ -1.34
GAPLINC-202ENST00000579007 AKT1S1Q96B36 256 aa6.65□□□□□ -1.34
GAPLINC-202ENST00000579007 RBM42Q9BTD8 480 aaKnown RBP6.65□□□□□ -1.34
GAPLINC-202ENST00000579007 FHDC1Q9C0D6 1143 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms