RNA–Protein interactions for RNA: ENST00000578830.5

NUP85-208, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-208ENST00000578830 KDRP35968 1356 aa12.13□□□□□ -0.47
NUP85-208ENST00000578830 C10orf71Q711Q0 1435 aa12.12□□□□□ -0.47
NUP85-208ENST00000578830 TOMM70O94826 608 aa12.12□□□□□ -0.47
NUP85-208ENST00000578830 TRAPPC3LQ5T215 181 aa12.12□□□□□ -0.47
NUP85-208ENST00000578830 NLGN1Q8N2Q7 840 aa12.12□□□□□ -0.47
NUP85-208ENST00000578830 TNRC6CQ9HCJ0 1690 aaKnown RBP12.12□□□□□ -0.47
NUP85-208ENST00000578830 SCN11AQ9UI33 1791 aa12.12□□□□□ -0.47
NUP85-208ENST00000578830 IFNLR1Q8IU57 520 aaPredicted RBP12.11□□□□□ -0.47
NUP85-208ENST00000578830 TRPC6Q9Y210 931 aa12.11□□□□□ -0.47
NUP85-208ENST00000578830 RTCBQ9Y3I0 505 aaKnown RBP12.11□□□□□ -0.47
NUP85-208ENST00000578830 AFDNP55196 1824 aaKnown RBP12.11□□□□□ -0.47
NUP85-208ENST00000578830 A0A0G2JLW4 131 aa12.1□□□□□ -0.47
NUP85-208ENST00000578830 RC3H1Q5TC82 1133 aaKnown RBP12.1□□□□□ -0.47
NUP85-208ENST00000578830 POLKQ9UBT6 870 aa12.1□□□□□ -0.47
NUP85-208ENST00000578830 BCS1LQ9Y276 419 aa12.1□□□□□ -0.47
NUP85-208ENST00000578830 TJP1Q07157 1748 aa12.1□□□□□ -0.47
NUP85-208ENST00000578830 ERVV-2B6SEH9 535 aa12.09□□□□□ -0.47
NUP85-208ENST00000578830 DCAF8Q5TAQ9 597 aa12.09□□□□□ -0.47
NUP85-208ENST00000578830 DNAJC5GQ8N7S2 189 aa12.09□□□□□ -0.47
NUP85-208ENST00000578830 CCDC87Q9NVE4 849 aa12.09□□□□□ -0.47
NUP85-208ENST00000578830 CNTNAP4Q9C0A0 1308 aa12.09□□□□□ -0.47
NUP85-208ENST00000578830 DLEC1Q9Y238 1755 aa12.08□□□□□ -0.48
NUP85-208ENST00000578830 ADAMTS7Q9UKP4 1686 aa12.08□□□□□ -0.48
NUP85-208ENST00000578830 GYS1P13807 737 aa12.08□□□□□ -0.48
NUP85-208ENST00000578830 ARHGAP27Q6ZUM4 889 aa12.08□□□□□ -0.48
NUP85-208ENST00000578830 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
NUP85-208ENST00000578830 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.48
NUP85-208ENST00000578830 RPS6KA4O75676 772 aa12.07□□□□□ -0.48
NUP85-208ENST00000578830 FCHSD2O94868 740 aa12.07□□□□□ -0.48
NUP85-208ENST00000578830 HSP90AB1P08238 724 aaKnown RBP12.07□□□□□ -0.48
NUP85-208ENST00000578830 DPEP1P16444 411 aa12.07□□□□□ -0.48
NUP85-208ENST00000578830 RFC4P35249 363 aa12.07□□□□□ -0.48
NUP85-208ENST00000578830 EIF4A2Q14240 407 aaKnown RBP12.07□□□□□ -0.48
NUP85-208ENST00000578830 DCAF5Q96JK2 942 aa12.07□□□□□ -0.48
NUP85-208ENST00000578830 NMRK2Q9NPI5 230 aa12.07□□□□□ -0.48
NUP85-208ENST00000578830 PARP3Q9Y6F1 533 aa12.07□□□□□ -0.48
NUP85-208ENST00000578830 DICER1Q9UPY3 1922 aaKnown RBP12.06□□□□□ -0.48
NUP85-208ENST00000578830 KCNA3P22001 575 aa12.06□□□□□ -0.48
NUP85-208ENST00000578830 RBM46Q8TBY0 533 aaKnown RBP12.06□□□□□ -0.48
NUP85-208ENST00000578830 KDM6AO15550 1401 aaPredicted RBP12.05□□□□□ -0.48
NUP85-208ENST00000578830 LHX8Q68G74 356 aa12.05□□□□□ -0.48
NUP85-208ENST00000578830 PCDHB13Q9Y5F0 798 aa12.05□□□□□ -0.48
NUP85-208ENST00000578830 NRXN2Q9P2S2 1712 aa12.04□□□□□ -0.48
NUP85-208ENST00000578830 ATMINO43313 823 aaPredicted RBP12.04□□□□□ -0.48
NUP85-208ENST00000578830 PLEKHO1Q53GL0 409 aaPredicted RBP12.04□□□□□ -0.48
NUP85-208ENST00000578830 C9orf131Q5VYM1 1079 aa12.04□□□□□ -0.48
NUP85-208ENST00000578830 ASTLQ6HA08 431 aaPredicted RBP12.04□□□□□ -0.48
NUP85-208ENST00000578830 C16orf71Q8IYS4 520 aaPredicted RBP12.04□□□□□ -0.48
NUP85-208ENST00000578830 PIM2Q9P1W9 311 aa12.04□□□□□ -0.48
NUP85-208ENST00000578830 TIAM2Q8IVF5 1701 aa12.03□□□□□ -0.48
NUP85-208ENST00000578830 KCPQ6ZWJ8 1503 aa12.03□□□□□ -0.48
NUP85-208ENST00000578830 PYGBP11216 843 aa12.03□□□□□ -0.48
NUP85-208ENST00000578830 TNNT2P45379 298 aaPredicted RBP12.03□□□□□ -0.48
NUP85-208ENST00000578830 CABP4P57796 275 aa12.03□□□□□ -0.48
NUP85-208ENST00000578830 FSTL1Q12841 308 aa12.03□□□□□ -0.48
NUP85-208ENST00000578830 AMOTQ4VCS5 1084 aa12.03□□□□□ -0.48
NUP85-208ENST00000578830 KDM2BQ8NHM5 1336 aa12.03□□□□□ -0.48
NUP85-208ENST00000578830 HSPA5P11021 654 aaKnown RBP12.02□□□□□ -0.49
NUP85-208ENST00000578830 DALRD3Q5D0E6 543 aaKnown RBP12.02□□□□□ -0.49
NUP85-208ENST00000578830 ZNF530Q6P9A1 599 aaPredicted RBP12.02□□□□□ -0.49
NUP85-208ENST00000578830 USP42Q9H9J4 1324 aaKnown RBP12.02□□□□□ -0.49
NUP85-208ENST00000578830 PTCD1O75127 700 aaKnown RBP12.01□□□□□ -0.49
NUP85-208ENST00000578830 CRKLP46109 303 aaKnown RBP12.01□□□□□ -0.49
NUP85-208ENST00000578830 MTHFSP49914 203 aa12.01□□□□□ -0.49
NUP85-208ENST00000578830 IFNL1Q8IU54 200 aa12.01□□□□□ -0.49
NUP85-208ENST00000578830 KLRG1Q96E93 195 aa12.01□□□□□ -0.49
NUP85-208ENST00000578830 BMP2KQ9NSY1 1161 aaPredicted RBP12.01□□□□□ -0.49
NUP85-208ENST00000578830 UBR2Q8IWV8 1755 aa12□□□□□ -0.49
NUP85-208ENST00000578830 CACNA1SQ13698 1873 aa12□□□□□ -0.49
NUP85-208ENST00000578830 ATN1P54259 1190 aaPredicted RBP12□□□□□ -0.49
NUP85-208ENST00000578830 EIF4G2P78344 907 aaKnown RBP eCLIP12□□□□□ -0.49
NUP85-208ENST00000578830 DDR1Q08345 913 aa12□□□□□ -0.49
NUP85-208ENST00000578830 C1orf141Q5JVX7 400 aa12□□□□□ -0.49
NUP85-208ENST00000578830 JMYQ8N9B5 988 aa12□□□□□ -0.49
NUP85-208ENST00000578830 NFATC2IPQ8NCF5 419 aa12□□□□□ -0.49
NUP85-208ENST00000578830 RNF181Q9P0P0 153 aa12□□□□□ -0.49
NUP85-208ENST00000578830 SRP68Q9UHB9 627 aaKnown RBP12□□□□□ -0.49
NUP85-208ENST00000578830 FER1L6Q2WGJ9 1857 aa12□□□□□ -0.49
NUP85-208ENST00000578830 ZNF316A6NFI3 1004 aaPredicted RBP11.99□□□□□ -0.49
NUP85-208ENST00000578830 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
NUP85-208ENST00000578830 ANKRD31Q8N7Z5 1873 aa11.99□□□□□ -0.49
NUP85-208ENST00000578830 ZC3H4Q9UPT8 1303 aaKnown RBP11.98□□□□□ -0.49
NUP85-208ENST00000578830 POLRMTO00411 1230 aaKnown RBP11.98□□□□□ -0.49
NUP85-208ENST00000578830 TM4SF1P30408 202 aa11.98□□□□□ -0.49
NUP85-208ENST00000578830 CHRNA5P30532 468 aa11.98□□□□□ -0.49
NUP85-208ENST00000578830 HTRA3P83110 453 aa11.98□□□□□ -0.49
NUP85-208ENST00000578830 INTS5Q6P9B9 1019 aaKnown RBP11.98□□□□□ -0.49
NUP85-208ENST00000578830 RRAGCQ9HB90 399 aa11.98□□□□□ -0.49
NUP85-208ENST00000578830 ZPR1O75312 459 aa11.97□□□□□ -0.49
NUP85-208ENST00000578830 AEBP1Q8IUX7 1158 aa11.97□□□□□ -0.49
NUP85-208ENST00000578830 POLR3GLQ9BT43 218 aa11.97□□□□□ -0.49
NUP85-208ENST00000578830 GSE1Q14687 1217 aa11.96□□□□□ -0.49
NUP85-208ENST00000578830 COL13A1Q5TAT6 717 aaPredicted RBP11.96□□□□□ -0.49
NUP85-208ENST00000578830 SMC1BQ8NDV3 1235 aa11.96□□□□□ -0.49
NUP85-208ENST00000578830 MRC1P22897 1456 aa11.95□□□□□ -0.5
NUP85-208ENST00000578830 ARFGEF2Q9Y6D5 1785 aa11.95□□□□□ -0.5
NUP85-208ENST00000578830 SOS1Q07889 1333 aaPredicted RBP11.95□□□□□ -0.5
NUP85-208ENST00000578830 TIE1P35590 1138 aa11.95□□□□□ -0.5
NUP85-208ENST00000578830 USPL1Q5W0Q7 1092 aa11.95□□□□□ -0.5
NUP85-208ENST00000578830 SULT6B1Q6IMI4 303 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms