RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 WDR17Q8IZU2 1322 aa12.39□□□□□ -0.43
RTTN-202ENST00000578780 KCNQ3O43525 872 aa12.39□□□□□ -0.43
RTTN-202ENST00000578780 RGS12O14924 1447 aa12.38□□□□□ -0.43
RTTN-202ENST00000578780 CHRM1P11229 460 aaPredicted RBP12.38□□□□□ -0.43
RTTN-202ENST00000578780 PHKG2P15735 406 aa12.38□□□□□ -0.43
RTTN-202ENST00000578780 HDAC1Q13547 482 aaPredicted RBP12.38□□□□□ -0.43
RTTN-202ENST00000578780 INTS3Q68E01 1043 aaKnown RBP12.38□□□□□ -0.43
RTTN-202ENST00000578780 GAS2L3Q86XJ1 694 aa12.38□□□□□ -0.43
RTTN-202ENST00000578780 ABCA3Q99758 1704 aa12.38□□□□□ -0.43
RTTN-202ENST00000578780 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
RTTN-202ENST00000578780 ROBO1Q9Y6N7 1651 aa12.37□□□□□ -0.43
RTTN-202ENST00000578780 COL5A2P05997 1499 aaPredicted RBP12.37□□□□□ -0.43
RTTN-202ENST00000578780 DYNC1I1O14576 645 aa12.37□□□□□ -0.43
RTTN-202ENST00000578780 LETM1O95202 739 aaPredicted RBP12.37□□□□□ -0.43
RTTN-202ENST00000578780 EVA1CP58658 441 aa12.37□□□□□ -0.43
RTTN-202ENST00000578780 HDGFL1Q5TGJ6 251 aa12.37□□□□□ -0.43
RTTN-202ENST00000578780 TEX2Q8IWB9 1127 aa12.37□□□□□ -0.43
RTTN-202ENST00000578780 C1orf115Q9H7X2 142 aa12.37□□□□□ -0.43
RTTN-202ENST00000578780 STRN4Q9NRL3 753 aa12.37□□□□□ -0.43
RTTN-202ENST00000578780 PLEKHG2Q9H7P9 1386 aa12.36□□□□□ -0.43
RTTN-202ENST00000578780 KDM3BQ7LBC6 1761 aa12.36□□□□□ -0.43
RTTN-202ENST00000578780 ZBTB22O15209 634 aa12.36□□□□□ -0.43
RTTN-202ENST00000578780 SEC24BO95487 1268 aa12.36□□□□□ -0.43
RTTN-202ENST00000578780 EIF2S2P20042 333 aaKnown RBP12.36□□□□□ -0.43
RTTN-202ENST00000578780 SECISBP2LQ93073 1101 aaKnown RBP12.36□□□□□ -0.43
RTTN-202ENST00000578780 PDZRN3Q9UPQ7 1066 aa12.36□□□□□ -0.43
RTTN-202ENST00000578780 CYP27B1O15528 508 aa12.36□□□□□ -0.43
RTTN-202ENST00000578780 HOXB7P09629 217 aa12.36□□□□□ -0.43
RTTN-202ENST00000578780 FLIIQ13045 1269 aa12.36□□□□□ -0.43
RTTN-202ENST00000578780 PPP1R9BQ96SB3 815 aa12.36□□□□□ -0.43
RTTN-202ENST00000578780 KDM6AO15550 1401 aaPredicted RBP12.35□□□□□ -0.43
RTTN-202ENST00000578780 F6X3S4 739 aa12.35□□□□□ -0.43
RTTN-202ENST00000578780 LARP1Q6PKG0 1096 aaKnown RBP12.35□□□□□ -0.43
RTTN-202ENST00000578780 DHX37Q8IY37 1157 aaKnown RBP12.35□□□□□ -0.43
RTTN-202ENST00000578780 CARD10Q9BWT7 1032 aa12.35□□□□□ -0.43
RTTN-202ENST00000578780 FKBP5Q13451 457 aaPredicted RBP12.34□□□□□ -0.43
RTTN-202ENST00000578780 SLC4A10Q6U841 1118 aa12.34□□□□□ -0.43
RTTN-202ENST00000578780 CHMP4AQ9BY43 222 aa12.34□□□□□ -0.43
RTTN-202ENST00000578780 SLC52A2Q9HAB3 445 aa12.34□□□□□ -0.43
RTTN-202ENST00000578780 ADAMTS7Q9UKP4 1686 aa12.34□□□□□ -0.43
RTTN-202ENST00000578780 BRD2P25440 801 aaKnown RBP12.34□□□□□ -0.43
RTTN-202ENST00000578780 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
RTTN-202ENST00000578780 DCAF5Q96JK2 942 aa12.34□□□□□ -0.43
RTTN-202ENST00000578780 VIRMAQ69YN4 1812 aaKnown RBP12.34□□□□□ -0.43
RTTN-202ENST00000578780 AHDC1Q5TGY3 1603 aaPredicted RBP12.34□□□□□ -0.43
RTTN-202ENST00000578780 HSP90AB1P08238 724 aaKnown RBP12.33□□□□□ -0.44
RTTN-202ENST00000578780 SMC5Q8IY18 1101 aa12.33□□□□□ -0.44
RTTN-202ENST00000578780 CCT4P50991 539 aaKnown RBP12.33□□□□□ -0.44
RTTN-202ENST00000578780 ZCRB1Q8TBF4 217 aaKnown RBP12.33□□□□□ -0.44
RTTN-202ENST00000578780 TBC1D2Q9BYX2 928 aa12.33□□□□□ -0.44
RTTN-202ENST00000578780 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
RTTN-202ENST00000578780 IL2RBP14784 551 aa12.32□□□□□ -0.44
RTTN-202ENST00000578780 MSNP26038 577 aaKnown RBP12.32□□□□□ -0.44
RTTN-202ENST00000578780 CCDC173Q0VFZ6 552 aa12.32□□□□□ -0.44
RTTN-202ENST00000578780 PHAXQ9H814 394 aaKnown RBP12.32□□□□□ -0.44
RTTN-202ENST00000578780 BTG4Q9NY30 223 aa12.32□□□□□ -0.44
RTTN-202ENST00000578780 CHPF2Q9P2E5 772 aa12.32□□□□□ -0.44
RTTN-202ENST00000578780 PKD1L3Q7Z443 1732 aa12.32□□□□□ -0.44
RTTN-202ENST00000578780 SIPA1L3O60292 1781 aaPredicted RBP12.32□□□□□ -0.44
RTTN-202ENST00000578780 SLC39A6Q13433 755 aa12.32□□□□□ -0.44
RTTN-202ENST00000578780 ZNF790Q6PG37 636 aa12.32□□□□□ -0.44
RTTN-202ENST00000578780 HEG1Q9ULI3 1381 aa12.32□□□□□ -0.44
RTTN-202ENST00000578780 SCN11AQ9UI33 1791 aa12.31□□□□□ -0.44
RTTN-202ENST00000578780 SIRT2Q8IXJ6 389 aa12.31□□□□□ -0.44
RTTN-202ENST00000578780 MEIS3Q99687 375 aa12.31□□□□□ -0.44
RTTN-202ENST00000578780 CABP4P57796 275 aa12.31□□□□□ -0.44
RTTN-202ENST00000578780 PCDH11XQ9BZA7 1347 aa12.31□□□□□ -0.44
RTTN-202ENST00000578780 PCDH11YQ9BZA8 1340 aa12.31□□□□□ -0.44
RTTN-202ENST00000578780 PARP4Q9UKK3 1724 aaKnown RBP12.3□□□□□ -0.44
RTTN-202ENST00000578780 PRAMEF22A3QJZ6 481 aa12.3□□□□□ -0.44
RTTN-202ENST00000578780 ZNF500O60304 480 aaPredicted RBP12.3□□□□□ -0.44
RTTN-202ENST00000578780 PIP4K2BP78356 416 aa12.3□□□□□ -0.44
RTTN-202ENST00000578780 CBX1P83916 185 aa12.3□□□□□ -0.44
RTTN-202ENST00000578780 TAF3Q5VWG9 929 aa12.3□□□□□ -0.44
RTTN-202ENST00000578780 TOM1O60784 492 aa12.29□□□□□ -0.44
RTTN-202ENST00000578780 DBF4Q9UBU7 674 aaPredicted RBP12.29□□□□□ -0.44
RTTN-202ENST00000578780 ANXA1P04083 346 aa12.29□□□□□ -0.44
RTTN-202ENST00000578780 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
RTTN-202ENST00000578780 DDX54Q8TDD1 881 aaKnown RBP12.29□□□□□ -0.44
RTTN-202ENST00000578780 GCC1Q96CN9 775 aa12.29□□□□□ -0.44
RTTN-202ENST00000578780 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.29□□□□□ -0.44
RTTN-202ENST00000578780 COL22A1Q8NFW1 1626 aaPredicted RBP12.28□□□□□ -0.44
RTTN-202ENST00000578780 NUCB1Q02818 461 aa12.28□□□□□ -0.44
RTTN-202ENST00000578780 TTC5Q8N0Z6 440 aa12.28□□□□□ -0.44
RTTN-202ENST00000578780 RGS22Q8NE09 1264 aa12.28□□□□□ -0.44
RTTN-202ENST00000578780 MRC1P22897 1456 aa12.28□□□□□ -0.44
RTTN-202ENST00000578780 CACNA1FO60840 1977 aa12.28□□□□□ -0.44
RTTN-202ENST00000578780 DNTTIP2Q5QJE6 756 aaKnown RBP12.28□□□□□ -0.44
RTTN-202ENST00000578780 RPAP2Q8IXW5 612 aaPredicted RBP12.28□□□□□ -0.44
RTTN-202ENST00000578780 ANKRD44Q8N8A2 993 aa12.28□□□□□ -0.44
RTTN-202ENST00000578780 COL14A1Q05707 1796 aaKnown RBP12.27□□□□□ -0.44
RTTN-202ENST00000578780 CEP85Q6P2H3 762 aa12.27□□□□□ -0.44
RTTN-202ENST00000578780 ZNF496Q96IT1 587 aaPredicted RBP12.27□□□□□ -0.44
RTTN-202ENST00000578780 CHMP5Q9NZZ3 219 aa12.27□□□□□ -0.44
RTTN-202ENST00000578780 PHLPP1O60346 1717 aa12.27□□□□□ -0.45
RTTN-202ENST00000578780 NKX1-1Q15270 411 aaPredicted RBP12.27□□□□□ -0.45
RTTN-202ENST00000578780 ATP2B3Q16720 1220 aa12.27□□□□□ -0.45
RTTN-202ENST00000578780 ANKRD45Q5TZF3 282 aa12.27□□□□□ -0.45
RTTN-202ENST00000578780 CHD1LQ86WJ1 897 aa12.27□□□□□ -0.45
RTTN-202ENST00000578780 LNPKQ9C0E8 428 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms