RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 DDNO94850 711 aaPredicted RBP15.8■□□□□ 0.12
GGA3-206ENST00000578773 TERF2IPQ9NYB0 399 aa15.8■□□□□ 0.12
GGA3-206ENST00000578773 SLX4Q8IY92 1834 aa15.8■□□□□ 0.12
GGA3-206ENST00000578773 RC3H1Q5TC82 1133 aaKnown RBP15.79■□□□□ 0.12
GGA3-206ENST00000578773 GGNBP2Q9H3C7 697 aa15.79■□□□□ 0.12
GGA3-206ENST00000578773 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
GGA3-206ENST00000578773 TMEM88BA6NKF7 163 aa15.78■□□□□ 0.12
GGA3-206ENST00000578773 ITGBL1O95965 494 aaPredicted RBP15.78■□□□□ 0.12
GGA3-206ENST00000578773 TM4SF1P30408 202 aa15.78■□□□□ 0.12
GGA3-206ENST00000578773 PHKG2P15735 406 aa15.77■□□□□ 0.12
GGA3-206ENST00000578773 TRPM7Q96QT4 1865 aa15.77■□□□□ 0.11
GGA3-206ENST00000578773 WDR33Q9C0J8 1336 aaKnown RBP15.76■□□□□ 0.11
GGA3-206ENST00000578773 CRKLP46109 303 aaKnown RBP15.76■□□□□ 0.11
GGA3-206ENST00000578773 ARFGEF2Q9Y6D5 1785 aa15.76■□□□□ 0.11
GGA3-206ENST00000578773 FLT4P35916 1363 aa15.75■□□□□ 0.11
GGA3-206ENST00000578773 RASSF10A6NK89 507 aa15.75■□□□□ 0.11
GGA3-206ENST00000578773 ERFEQ4G0M1 354 aa15.75■□□□□ 0.11
GGA3-206ENST00000578773 DPY19L2Q6NUT2 758 aa15.75■□□□□ 0.11
GGA3-206ENST00000578773 MCOLN1Q9GZU1 580 aa15.75■□□□□ 0.11
GGA3-206ENST00000578773 FMR1Q06787 632 aaKnown RBP eCLIP15.74■□□□□ 0.11
GGA3-206ENST00000578773 TTLL6Q8N841 843 aa15.74■□□□□ 0.11
GGA3-206ENST00000578773 SPG7Q9UQ90 795 aa15.74■□□□□ 0.11
GGA3-206ENST00000578773 EMILIN1Q9Y6C2 1016 aa15.74■□□□□ 0.11
GGA3-206ENST00000578773 FYB1O15117 783 aa15.73■□□□□ 0.11
GGA3-206ENST00000578773 DEFB115Q30KQ5 88 aa15.73■□□□□ 0.11
GGA3-206ENST00000578773 USPL1Q5W0Q7 1092 aa15.73■□□□□ 0.11
GGA3-206ENST00000578773 LDHDQ86WU2 507 aa15.73■□□□□ 0.11
GGA3-206ENST00000578773 C2CD5Q86YS7 1000 aa15.73■□□□□ 0.11
GGA3-206ENST00000578773 TAF1DQ9H5J8 278 aaPredicted RBP15.73■□□□□ 0.11
GGA3-206ENST00000578773 NFIXQ14938 502 aa15.72■□□□□ 0.11
GGA3-206ENST00000578773 C21orf2O43822 256 aa15.71■□□□□ 0.11
GGA3-206ENST00000578773 PTCD1O75127 700 aaKnown RBP15.71■□□□□ 0.11
GGA3-206ENST00000578773 EAPPQ56P03 285 aaPredicted RBP15.71■□□□□ 0.11
GGA3-206ENST00000578773 MAP2K1Q02750 393 aaPredicted RBP15.7■□□□□ 0.1
GGA3-206ENST00000578773 GRM1Q13255 1194 aa15.7■□□□□ 0.1
GGA3-206ENST00000578773 MAP1SQ66K74 1059 aaPredicted RBP15.7■□□□□ 0.1
GGA3-206ENST00000578773 INTS5Q6P9B9 1019 aaKnown RBP15.7■□□□□ 0.1
GGA3-206ENST00000578773 IFNL2Q8IZJ0 200 aa15.7■□□□□ 0.1
GGA3-206ENST00000578773 TONSLQ96HA7 1378 aa15.7■□□□□ 0.1
GGA3-206ENST00000578773 CCDC24Q8N4L8 307 aa15.69■□□□□ 0.1
GGA3-206ENST00000578773 SIN3AQ96ST3 1273 aa15.69■□□□□ 0.1
GGA3-206ENST00000578773 EYA1Q99502 592 aa15.69■□□□□ 0.1
GGA3-206ENST00000578773 BCL2L12Q9HB09 334 aa15.69■□□□□ 0.1
GGA3-206ENST00000578773 SCN11AQ9UI33 1791 aa15.69■□□□□ 0.1
GGA3-206ENST00000578773 ZNF541Q9H0D2 1346 aa15.68■□□□□ 0.1
GGA3-206ENST00000578773 CYP4F22Q6NT55 531 aa15.68■□□□□ 0.1
GGA3-206ENST00000578773 ABT1Q9ULW3 272 aaKnown RBP15.68■□□□□ 0.1
GGA3-206ENST00000578773 AOC2O75106 756 aa15.67■□□□□ 0.1
GGA3-206ENST00000578773 SERPINB2P05120 415 aa15.67■□□□□ 0.1
GGA3-206ENST00000578773 SOX10P56693 466 aa15.67■□□□□ 0.1
GGA3-206ENST00000578773 L3MBTL3Q96JM7 780 aaPredicted RBP15.66■□□□□ 0.1
GGA3-206ENST00000578773 CAPNS2Q96L46 248 aa15.66■□□□□ 0.1
GGA3-206ENST00000578773 CLEC11AQ9Y240 323 aa15.66■□□□□ 0.1
GGA3-206ENST00000578773 ZNF622Q969S3 477 aaKnown RBP eCLIP15.65■□□□□ 0.1
GGA3-206ENST00000578773 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.65■□□□□ 0.1
GGA3-206ENST00000578773 SOS1Q07889 1333 aaPredicted RBP15.65■□□□□ 0.1
GGA3-206ENST00000578773 SCN7AQ01118 1682 aa15.64■□□□□ 0.09
GGA3-206ENST00000578773 H0YIN7 160 aa15.64■□□□□ 0.09
GGA3-206ENST00000578773 DGKZQ13574 1117 aa15.64■□□□□ 0.09
GGA3-206ENST00000578773 PAXIP1Q6ZW49 1069 aaPredicted RBP15.64■□□□□ 0.09
GGA3-206ENST00000578773 CNTROBQ8N137 903 aa15.64■□□□□ 0.09
GGA3-206ENST00000578773 KIF24Q5T7B8 1368 aa15.63■□□□□ 0.09
GGA3-206ENST00000578773 ERVV-2B6SEH9 535 aa15.63■□□□□ 0.09
GGA3-206ENST00000578773 PPM1GO15355 546 aaPredicted RBP15.63■□□□□ 0.09
GGA3-206ENST00000578773 CARD11Q9BXL7 1154 aa15.63■□□□□ 0.09
GGA3-206ENST00000578773 TAOK3Q9H2K8 898 aa15.63■□□□□ 0.09
GGA3-206ENST00000578773 LTBP3Q9NS15 1303 aa15.63■□□□□ 0.09
GGA3-206ENST00000578773 IQCA1LA6NCM1 817 aa15.62■□□□□ 0.09
GGA3-206ENST00000578773 ZPR1O75312 459 aa15.62■□□□□ 0.09
GGA3-206ENST00000578773 BICDL1Q6ZP65 573 aa15.62■□□□□ 0.09
GGA3-206ENST00000578773 DNAJC10Q8IXB1 793 aa15.62■□□□□ 0.09
GGA3-206ENST00000578773 GPR101Q96P66 508 aaPredicted RBP15.62■□□□□ 0.09
GGA3-206ENST00000578773 RNF123Q5XPI4 1314 aa15.62■□□□□ 0.09
GGA3-206ENST00000578773 COL15A1P39059 1388 aa15.62■□□□□ 0.09
GGA3-206ENST00000578773 EPHX2P34913 555 aa15.61■□□□□ 0.09
GGA3-206ENST00000578773 PRPF38BQ5VTL8 546 aaKnown RBP15.61■□□□□ 0.09
GGA3-206ENST00000578773 TESK2Q96S53 571 aa15.61■□□□□ 0.09
GGA3-206ENST00000578773 BCORQ6W2J9 1755 aa15.61■□□□□ 0.09
GGA3-206ENST00000578773 CABP4P57796 275 aa15.6■□□□□ 0.09
GGA3-206ENST00000578773 DDX21Q9NR30 783 aaKnown RBP eCLIP15.6■□□□□ 0.09
GGA3-206ENST00000578773 HACL1Q9UJ83 578 aa15.6■□□□□ 0.09
GGA3-206ENST00000578773 COL4A5P29400 1685 aa15.6■□□□□ 0.09
GGA3-206ENST00000578773 TRAF5O00463 557 aa15.59■□□□□ 0.09
GGA3-206ENST00000578773 PUS7Q96PZ0 661 aaKnown RBP15.59■□□□□ 0.09
GGA3-206ENST00000578773 BEGAINQ9BUH8 593 aa15.59■□□□□ 0.09
GGA3-206ENST00000578773 NARFQ9UHQ1 456 aa15.59■□□□□ 0.09
GGA3-206ENST00000578773 NEUROD1Q13562 356 aa15.58■□□□□ 0.08
GGA3-206ENST00000578773 CST9Q5W186 159 aa15.58■□□□□ 0.08
GGA3-206ENST00000578773 OLFM4Q6UX06 510 aa15.58■□□□□ 0.08
GGA3-206ENST00000578773 ZBTB1Q9Y2K1 713 aa15.58■□□□□ 0.08
GGA3-206ENST00000578773 NFATC2IPQ8NCF5 419 aa15.57■□□□□ 0.08
GGA3-206ENST00000578773 UBR2Q8IWV8 1755 aa15.57■□□□□ 0.08
GGA3-206ENST00000578773 TBC1D9BQ66K14 1250 aa15.56■□□□□ 0.08
GGA3-206ENST00000578773 PRPF40BQ6NWY9 871 aaKnown RBP15.56■□□□□ 0.08
GGA3-206ENST00000578773 ZIC5Q96T25 663 aa15.56■□□□□ 0.08
GGA3-206ENST00000578773 WASHC2AQ641Q2 1341 aa15.56■□□□□ 0.08
GGA3-206ENST00000578773 CYP19A1P11511 503 aaPredicted RBP15.55■□□□□ 0.08
GGA3-206ENST00000578773 EIF4A2Q14240 407 aaKnown RBP15.55■□□□□ 0.08
GGA3-206ENST00000578773 PRR5LQ6MZQ0 368 aa15.55■□□□□ 0.08
GGA3-206ENST00000578773 ZNF530Q6P9A1 599 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms