RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 RC3H1Q5TC82 1133 aaKnown RBP8.84□□□□□ -0.99
UBB-208ENST00000578706 LDHDQ86WU2 507 aa8.84□□□□□ -0.99
UBB-208ENST00000578706 CARMIL3Q8ND23 1372 aa8.84□□□□□ -0.99
UBB-208ENST00000578706 SMG6Q86US8 1419 aaKnown RBP8.83□□□□□ -1
UBB-208ENST00000578706 TM4SF1P30408 202 aa8.83□□□□□ -1
UBB-208ENST00000578706 RRS1Q15050 365 aaKnown RBP8.83□□□□□ -1
UBB-208ENST00000578706 DPY19L2Q6NUT2 758 aa8.83□□□□□ -1
UBB-208ENST00000578706 TAF1DQ9H5J8 278 aaPredicted RBP8.83□□□□□ -1
UBB-208ENST00000578706 TMOD3Q9NYL9 352 aa8.83□□□□□ -1
UBB-208ENST00000578706 ERFEQ4G0M1 354 aa8.82□□□□□ -1
UBB-208ENST00000578706 CACNA1SQ13698 1873 aa8.81□□□□□ -1
UBB-208ENST00000578706 SOX10P56693 466 aa8.81□□□□□ -1
UBB-208ENST00000578706 HSP90AB2PQ58FF8 381 aa8.81□□□□□ -1
UBB-208ENST00000578706 HDGFL2Q7Z4V5 671 aaPredicted RBP8.81□□□□□ -1
UBB-208ENST00000578706 TTLL6Q8N841 843 aa8.81□□□□□ -1
UBB-208ENST00000578706 TMC1Q8TDI8 760 aa8.81□□□□□ -1
UBB-208ENST00000578706 L3MBTL3Q96JM7 780 aaPredicted RBP8.81□□□□□ -1
UBB-208ENST00000578706 INSRP06213 1382 aa8.81□□□□□ -1
UBB-208ENST00000578706 FMR1Q06787 632 aaKnown RBP eCLIP8.8□□□□□ -1
UBB-208ENST00000578706 MAP1SQ66K74 1059 aaPredicted RBP8.8□□□□□ -1
UBB-208ENST00000578706 CAPNS2Q96L46 248 aa8.8□□□□□ -1
UBB-208ENST00000578706 SLX4Q8IY92 1834 aa8.8□□□□□ -1
UBB-208ENST00000578706 TRPM7Q96QT4 1865 aa8.79□□□□□ -1
UBB-208ENST00000578706 DGKZQ13574 1117 aa8.79□□□□□ -1
UBB-208ENST00000578706 CYP4F22Q6NT55 531 aa8.79□□□□□ -1
UBB-208ENST00000578706 COG3Q96JB2 828 aa8.79□□□□□ -1
UBB-208ENST00000578706 LTBP3Q9NS15 1303 aa8.79□□□□□ -1
UBB-208ENST00000578706 ARFGEF2Q9Y6D5 1785 aa8.78□□□□□ -1
UBB-208ENST00000578706 ANKRD26Q9UPS8 1709 aa8.78□□□□□ -1
UBB-208ENST00000578706 IQCA1LA6NCM1 817 aa8.78□□□□□ -1
UBB-208ENST00000578706 AOC2O75106 756 aa8.78□□□□□ -1
UBB-208ENST00000578706 PHKG2P15735 406 aa8.78□□□□□ -1
UBB-208ENST00000578706 CRKLP46109 303 aaKnown RBP8.78□□□□□ -1
UBB-208ENST00000578706 NFIXQ14938 502 aa8.78□□□□□ -1
UBB-208ENST00000578706 EAPPQ56P03 285 aaPredicted RBP8.78□□□□□ -1
UBB-208ENST00000578706 C2CD5Q86YS7 1000 aa8.78□□□□□ -1
UBB-208ENST00000578706 CNTROBQ8N137 903 aa8.78□□□□□ -1
UBB-208ENST00000578706 GPR101Q96P66 508 aaPredicted RBP8.78□□□□□ -1
UBB-208ENST00000578706 RBM42Q9BTD8 480 aaKnown RBP8.78□□□□□ -1
UBB-208ENST00000578706 TERF2IPQ9NYB0 399 aa8.78□□□□□ -1
UBB-208ENST00000578706 ABT1Q9ULW3 272 aaKnown RBP8.78□□□□□ -1
UBB-208ENST00000578706 ZNF541Q9H0D2 1346 aa8.78□□□□□ -1
UBB-208ENST00000578706 FLT4P35916 1363 aa8.77□□□□□ -1.01
UBB-208ENST00000578706 TONSLQ96HA7 1378 aa8.77□□□□□ -1.01
UBB-208ENST00000578706 CUL9Q8IWT3 2517 aa8.77□□□□□ -1.01
UBB-208ENST00000578706 C21orf2O43822 256 aa8.77□□□□□ -1.01
UBB-208ENST00000578706 USPL1Q5W0Q7 1092 aa8.77□□□□□ -1.01
UBB-208ENST00000578706 L3MBTL2Q969R5 705 aa8.77□□□□□ -1.01
UBB-208ENST00000578706 BEGAINQ9BUH8 593 aa8.77□□□□□ -1.01
UBB-208ENST00000578706 ZNF219Q9P2Y4 722 aaPredicted RBP8.77□□□□□ -1.01
UBB-208ENST00000578706 GRM1Q13255 1194 aa8.76□□□□□ -1.01
UBB-208ENST00000578706 INTS5Q6P9B9 1019 aaKnown RBP8.76□□□□□ -1.01
UBB-208ENST00000578706 TAOK3Q9H2K8 898 aa8.76□□□□□ -1.01
UBB-208ENST00000578706 BCL2L12Q9HB09 334 aa8.76□□□□□ -1.01
UBB-208ENST00000578706 DDX21Q9NR30 783 aaKnown RBP eCLIP8.76□□□□□ -1.01
UBB-208ENST00000578706 SPG7Q9UQ90 795 aa8.76□□□□□ -1.01
UBB-208ENST00000578706 ROCK2O75116 1388 aaKnown RBP8.75□□□□□ -1.01
UBB-208ENST00000578706 SZT2Q5T011 3432 aa8.75□□□□□ -1.01
UBB-208ENST00000578706 EPHX2P34913 555 aa8.75□□□□□ -1.01
UBB-208ENST00000578706 CST9Q5W186 159 aa8.75□□□□□ -1.01
UBB-208ENST00000578706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.01
UBB-208ENST00000578706 RNF123Q5XPI4 1314 aa8.75□□□□□ -1.01
UBB-208ENST00000578706 KIF20BQ96Q89 1820 aa8.75□□□□□ -1.01
UBB-208ENST00000578706 MKI67P46013 3256 aaKnown RBP8.74□□□□□ -1.01
UBB-208ENST00000578706 H0YIN7 160 aa8.74□□□□□ -1.01
UBB-208ENST00000578706 SERPINB2P05120 415 aa8.74□□□□□ -1.01
UBB-208ENST00000578706 MAP2K2P36507 400 aa8.74□□□□□ -1.01
UBB-208ENST00000578706 ECE1P42892 770 aa8.74□□□□□ -1.01
UBB-208ENST00000578706 HABP4Q5JVS0 413 aaKnown RBP8.74□□□□□ -1.01
UBB-208ENST00000578706 PAXIP1Q6ZW49 1069 aaPredicted RBP8.74□□□□□ -1.01
UBB-208ENST00000578706 IFNL2Q8IZJ0 200 aa8.74□□□□□ -1.01
UBB-208ENST00000578706 HACL1Q9UJ83 578 aa8.74□□□□□ -1.01
UBB-208ENST00000578706 CLEC11AQ9Y240 323 aa8.74□□□□□ -1.01
UBB-208ENST00000578706 SOS1Q07889 1333 aaPredicted RBP8.74□□□□□ -1.01
UBB-208ENST00000578706 KIF24Q5T7B8 1368 aa8.73□□□□□ -1.01
UBB-208ENST00000578706 BCORQ6W2J9 1755 aa8.73□□□□□ -1.01
UBB-208ENST00000578706 SCN11AQ9UI33 1791 aa8.73□□□□□ -1.01
UBB-208ENST00000578706 FYB1O15117 783 aa8.73□□□□□ -1.01
UBB-208ENST00000578706 ZIC5Q96T25 663 aa8.73□□□□□ -1.01
UBB-208ENST00000578706 GGNBP2Q9H3C7 697 aa8.73□□□□□ -1.01
UBB-208ENST00000578706 TLL2Q9Y6L7 1015 aa8.73□□□□□ -1.01
UBB-208ENST00000578706 COL4A5P29400 1685 aa8.72□□□□□ -1.01
UBB-208ENST00000578706 ZNF316A6NFI3 1004 aaPredicted RBP8.72□□□□□ -1.01
UBB-208ENST00000578706 ERVV-2B6SEH9 535 aa8.72□□□□□ -1.01
UBB-208ENST00000578706 TRAF5O00463 557 aa8.72□□□□□ -1.01
UBB-208ENST00000578706 CA12O43570 354 aa8.72□□□□□ -1.01
UBB-208ENST00000578706 PTCD1O75127 700 aaKnown RBP8.72□□□□□ -1.01
UBB-208ENST00000578706 EYA1Q99502 592 aa8.72□□□□□ -1.01
UBB-208ENST00000578706 EMILIN1Q9Y6C2 1016 aa8.72□□□□□ -1.01
UBB-208ENST00000578706 SCN7AQ01118 1682 aa8.72□□□□□ -1.01
UBB-208ENST00000578706 A0A0C4DFX4 3053 aa8.72□□□□□ -1.01
UBB-208ENST00000578706 ZPR1O75312 459 aa8.71□□□□□ -1.02
UBB-208ENST00000578706 FXR1P51114 621 aaKnown RBP eCLIP8.71□□□□□ -1.02
UBB-208ENST00000578706 BRPF1P55201 1214 aaPredicted RBP8.71□□□□□ -1.02
UBB-208ENST00000578706 CIAPIN1Q6FI81 312 aa8.71□□□□□ -1.02
UBB-208ENST00000578706 PNMA8AQ86V59 439 aaPredicted RBP8.71□□□□□ -1.02
UBB-208ENST00000578706 CCDC24Q8N4L8 307 aa8.71□□□□□ -1.02
UBB-208ENST00000578706 ZNF622Q969S3 477 aaKnown RBP eCLIP8.71□□□□□ -1.02
UBB-208ENST00000578706 PUS7Q96PZ0 661 aaKnown RBP8.71□□□□□ -1.02
UBB-208ENST00000578706 NARFQ9UHQ1 456 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms