RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 KIF1BPQ96EK5 621 aa20.13■□□□□ 0.81
DDX42-208ENST00000578681 EIF4A1P60842 406 aaKnown RBP20.13■□□□□ 0.81
DDX42-208ENST00000578681 FAM177BA6PVY3 158 aa20.13■□□□□ 0.81
DDX42-208ENST00000578681 SSFA2P28290 1259 aa20.13■□□□□ 0.81
DDX42-208ENST00000578681 COPS6Q7L5N1 327 aa20.13■□□□□ 0.81
DDX42-208ENST00000578681 RHPN1Q8TCX5 695 aa20.13■□□□□ 0.81
DDX42-208ENST00000578681 FSD1Q9BTV5 496 aa20.13■□□□□ 0.81
DDX42-208ENST00000578681 DNAJC2Q99543 621 aaKnown RBP20.13■□□□□ 0.81
DDX42-208ENST00000578681 USP44Q9H0E7 712 aa20.12■□□□□ 0.81
DDX42-208ENST00000578681 AXIN2Q9Y2T1 843 aa20.12■□□□□ 0.81
DDX42-208ENST00000578681 XAGE3Q8WTP9 111 aa20.12■□□□□ 0.81
DDX42-208ENST00000578681 CDC42BPGQ6DT37 1551 aa20.12■□□□□ 0.81
DDX42-208ENST00000578681 SHPRHQ149N8 1683 aa20.12■□□□□ 0.81
DDX42-208ENST00000578681 IFNL2Q8IZJ0 200 aa20.11■□□□□ 0.81
DDX42-208ENST00000578681 TNPO1Q92973 898 aaKnown RBP20.11■□□□□ 0.81
DDX42-208ENST00000578681 BOLA2Q9H3K6 86 aa20.11■□□□□ 0.81
DDX42-208ENST00000578681 PROSER3Q2NL68 480 aa20.1■□□□□ 0.81
DDX42-208ENST00000578681 RUFY2Q8WXA3 655 aa20.1■□□□□ 0.81
DDX42-208ENST00000578681 BBXQ8WY36 941 aaPredicted RBP20.1■□□□□ 0.81
DDX42-208ENST00000578681 PAXIP1Q6ZW49 1069 aaPredicted RBP20.09■□□□□ 0.81
DDX42-208ENST00000578681 UBE3BQ7Z3V4 1068 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 ARHGEF25Q86VW2 580 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 KLHDC4Q8TBB5 520 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 ZBTB3Q9H5J0 574 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 OVOS2A0A0J9YW53 1432 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 OVOS2Q6IE36 1432 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 DTNBO60941 627 aa20.09■□□□□ 0.81
DDX42-208ENST00000578681 HYPKQ9NX55 129 aa20.08■□□□□ 0.81
DDX42-208ENST00000578681 RRP9O43818 475 aaKnown RBP20.08■□□□□ 0.8
DDX42-208ENST00000578681 NPHP3Q7Z494 1330 aa20.08■□□□□ 0.8
DDX42-208ENST00000578681 TECPR2O15040 1411 aa20.08■□□□□ 0.8
DDX42-208ENST00000578681 PRPF40AO75400 957 aaKnown RBP20.08■□□□□ 0.8
DDX42-208ENST00000578681 HSP90B1P14625 803 aaKnown RBP20.07■□□□□ 0.8
DDX42-208ENST00000578681 LARP1Q6PKG0 1096 aaKnown RBP20.07■□□□□ 0.8
DDX42-208ENST00000578681 CD2BP2O95400 341 aaKnown RBP20.07■□□□□ 0.8
DDX42-208ENST00000578681 NUCB2P80303 420 aa20.07■□□□□ 0.8
DDX42-208ENST00000578681 FAM43AQ8N2R8 423 aa20.07■□□□□ 0.8
DDX42-208ENST00000578681 ZKSCAN1P17029 563 aaPredicted RBP20.06■□□□□ 0.8
DDX42-208ENST00000578681 KSR2Q6VAB6 950 aa20.06■□□□□ 0.8
DDX42-208ENST00000578681 A0A087WZG4 1122 aa20.06■□□□□ 0.8
DDX42-208ENST00000578681 PTCH1Q13635 1447 aa20.06■□□□□ 0.8
DDX42-208ENST00000578681 RBM25P49756 843 aaKnown RBP20.05■□□□□ 0.8
DDX42-208ENST00000578681 USP26Q9BXU7 913 aa20.05■□□□□ 0.8
DDX42-208ENST00000578681 USP31Q70CQ4 1352 aa20.05■□□□□ 0.8
DDX42-208ENST00000578681 NPHP4O75161 1426 aaPredicted RBP20.05■□□□□ 0.8
DDX42-208ENST00000578681 CAVIN1Q6NZI2 390 aaKnown RBP20.05■□□□□ 0.8
DDX42-208ENST00000578681 ZNF790Q6PG37 636 aa20.05■□□□□ 0.8
DDX42-208ENST00000578681 TMEM94Q12767 1356 aa20.05■□□□□ 0.8
DDX42-208ENST00000578681 RAB11FIP3O75154 756 aa20.04■□□□□ 0.8
DDX42-208ENST00000578681 ANKRD13DQ6ZTN6 518 aa20.04■□□□□ 0.8
DDX42-208ENST00000578681 FMNL2Q96PY5 1086 aa20.04■□□□□ 0.8
DDX42-208ENST00000578681 NUTM2BA6NNL0 878 aaPredicted RBP20.04■□□□□ 0.8
DDX42-208ENST00000578681 NUTM2EB1AL46 878 aaPredicted RBP20.04■□□□□ 0.8
DDX42-208ENST00000578681 NUTM2AQ8IVF1 878 aaPredicted RBP20.04■□□□□ 0.8
DDX42-208ENST00000578681 ZNF496Q96IT1 587 aaPredicted RBP20.04■□□□□ 0.8
DDX42-208ENST00000578681 NPHP1O15259 732 aa20.04■□□□□ 0.8
DDX42-208ENST00000578681 GRM8O00222 908 aa20.03■□□□□ 0.8
DDX42-208ENST00000578681 VPS37CA5D8V6 355 aaPredicted RBP20.03■□□□□ 0.8
DDX42-208ENST00000578681 ZGPATQ8N5A5 531 aaKnown RBP20.03■□□□□ 0.8
DDX42-208ENST00000578681 ESYT1Q9BSJ8 1104 aa20.03■□□□□ 0.8
DDX42-208ENST00000578681 USP32Q8NFA0 1604 aa20.03■□□□□ 0.8
DDX42-208ENST00000578681 GIGYF1O75420 1035 aaPredicted RBP20.03■□□□□ 0.8
DDX42-208ENST00000578681 PTMAP06454 111 aaKnown RBP20.03■□□□□ 0.8
DDX42-208ENST00000578681 FOSBP53539 338 aa20.03■□□□□ 0.8
DDX42-208ENST00000578681 ERC1Q8IUD2 1116 aa20.03■□□□□ 0.8
DDX42-208ENST00000578681 SOS1Q07889 1333 aaPredicted RBP20.02■□□□□ 0.8
DDX42-208ENST00000578681 GLRX3O76003 335 aaKnown RBP20.02■□□□□ 0.79
DDX42-208ENST00000578681 SNRPA1P09661 255 aaKnown RBP20.02■□□□□ 0.79
DDX42-208ENST00000578681 USP16Q9Y5T5 823 aa20.02■□□□□ 0.79
DDX42-208ENST00000578681 PRPF40BQ6NWY9 871 aaKnown RBP20.01■□□□□ 0.79
DDX42-208ENST00000578681 GOLGA6L4A6NEF3 574 aa20.01■□□□□ 0.79
DDX42-208ENST00000578681 ADAMTS2O95450 1211 aa20.01■□□□□ 0.79
DDX42-208ENST00000578681 MAPK8IP2Q13387 824 aaPredicted RBP20.01■□□□□ 0.79
DDX42-208ENST00000578681 UNC5CLQ8IV45 518 aa20■□□□□ 0.79
DDX42-208ENST00000578681 JAKMIP1Q96N16 626 aaKnown RBP20■□□□□ 0.79
DDX42-208ENST00000578681 BICC1Q9H694 974 aaKnown RBP20■□□□□ 0.79
DDX42-208ENST00000578681 SMC3Q9UQE7 1217 aa20■□□□□ 0.79
DDX42-208ENST00000578681 CRB1P82279 1406 aa20■□□□□ 0.79
DDX42-208ENST00000578681 ECHDC1Q9NTX5 307 aa19.99■□□□□ 0.79
DDX42-208ENST00000578681 CHMLP26374 656 aa19.99■□□□□ 0.79
DDX42-208ENST00000578681 STK3Q13188 491 aa19.99■□□□□ 0.79
DDX42-208ENST00000578681 SKOR2Q2VWA4 1001 aaPredicted RBP19.99■□□□□ 0.79
DDX42-208ENST00000578681 LINS1Q8NG48 757 aa19.99■□□□□ 0.79
DDX42-208ENST00000578681 CASTP20810 708 aaKnown RBP19.99■□□□□ 0.79
DDX42-208ENST00000578681 ZCRB1Q8TBF4 217 aaKnown RBP19.99■□□□□ 0.79
DDX42-208ENST00000578681 DDX21Q9NR30 783 aaKnown RBP eCLIP19.98■□□□□ 0.79
DDX42-208ENST00000578681 SNX21Q969T3 373 aa19.98■□□□□ 0.79
DDX42-208ENST00000578681 KIF20BQ96Q89 1820 aa19.98■□□□□ 0.79
DDX42-208ENST00000578681 TCEANC2Q96MN5 208 aa19.98■□□□□ 0.79
DDX42-208ENST00000578681 CIZ1Q9ULV3 898 aaPredicted RBP19.98■□□□□ 0.79
DDX42-208ENST00000578681 CPA1P15085 419 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 ADGRB2O60241 1585 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 DIP2AQ14689 1571 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.97■□□□□ 0.79
DDX42-208ENST00000578681 GPTP24298 496 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 BEND3Q5T5X7 828 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 NDUFB9Q9Y6M9 179 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 PTMSP20962 102 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 RNF214Q8ND24 703 aa19.97■□□□□ 0.79
DDX42-208ENST00000578681 SUCLG2Q96I99 432 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms