RNA–Protein interactions for RNA: ENST00000578340.4

AC116003.1-201, humanhuman

TSL 3 BASIC

Gene AC116003.1, Length 536 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116003.1-201ENST00000578340 KIF13BQ9NQT8 1826 aa21.32■■□□□ 1
AC116003.1-201ENST00000578340 CANXP27824 592 aaKnown RBP21.32■■□□□ 1
AC116003.1-201ENST00000578340 FKBP8Q14318 412 aa21.32■■□□□ 1
AC116003.1-201ENST00000578340 NFE2L2Q16236 605 aa21.32■■□□□ 1
AC116003.1-201ENST00000578340 PRKRIP1Q9H875 184 aaPredicted RBP21.32■■□□□ 1
AC116003.1-201ENST00000578340 COL15A1P39059 1388 aa21.32■■□□□ 1
AC116003.1-201ENST00000578340 MAPK8IP3Q9UPT6 1336 aa21.31■■□□□ 1
AC116003.1-201ENST00000578340 STARD3NLO95772 234 aa21.31■■□□□ 1
AC116003.1-201ENST00000578340 YBX3P16989 372 aaKnown RBP eCLIP21.31■■□□□ 1
AC116003.1-201ENST00000578340 USPL1Q5W0Q7 1092 aa21.3■■□□□ 1
AC116003.1-201ENST00000578340 PNNQ9H307 717 aaKnown RBP21.3■■□□□ 1
AC116003.1-201ENST00000578340 MIS18AQ9NYP9 233 aa21.3■■□□□ 1
AC116003.1-201ENST00000578340 N4BP2Q86UW6 1770 aaPredicted RBP21.3■■□□□ 1
AC116003.1-201ENST00000578340 KIAA1551Q9HCM1 1747 aa21.29■■□□□ 1
AC116003.1-201ENST00000578340 PRAMEF22A3QJZ6 481 aa21.29■■□□□ 1
AC116003.1-201ENST00000578340 ZPR1O75312 459 aa21.29■■□□□ 1
AC116003.1-201ENST00000578340 THUMPD2Q9BTF0 503 aaKnown RBP21.29■■□□□ 1
AC116003.1-201ENST00000578340 TEX13AQ9BXU3 409 aaPredicted RBP21.29■■□□□ 1
AC116003.1-201ENST00000578340 WWC3Q9ULE0 1092 aa21.29■■□□□ 1
AC116003.1-201ENST00000578340 PARP3Q9Y6F1 533 aa21.29■■□□□ 1
AC116003.1-201ENST00000578340 DDR1Q08345 913 aa21.28■■□□□ 1
AC116003.1-201ENST00000578340 TAF7Q15545 349 aaPredicted RBP21.28■■□□□ 1
AC116003.1-201ENST00000578340 NARFQ9UHQ1 456 aa21.28■■□□□ 1
AC116003.1-201ENST00000578340 KDM3BQ7LBC6 1761 aa21.28■■□□□ 1
AC116003.1-201ENST00000578340 A1BGP04217 495 aa21.27■■□□□ 1
AC116003.1-201ENST00000578340 EIF5P55010 431 aaKnown RBP21.27■■□□□ 1
AC116003.1-201ENST00000578340 USP16Q9Y5T5 823 aa21.27■■□□□ 1
AC116003.1-201ENST00000578340 C10orf71Q711Q0 1435 aa21.27■■□□□ 1
AC116003.1-201ENST00000578340 CCDC146Q8IYE0 955 aa21.26■□□□□ 0.99
AC116003.1-201ENST00000578340 BCL2L12Q9HB09 334 aa21.26■□□□□ 0.99
AC116003.1-201ENST00000578340 ZNF330Q9Y3S2 320 aaPredicted RBP21.26■□□□□ 0.99
AC116003.1-201ENST00000578340 AFDNP55196 1824 aaKnown RBP21.25■□□□□ 0.99
AC116003.1-201ENST00000578340 PXDNLA1KZ92 1463 aa21.25■□□□□ 0.99
AC116003.1-201ENST00000578340 SNRPA1P09661 255 aaKnown RBP21.24■□□□□ 0.99
AC116003.1-201ENST00000578340 TM4SF1P30408 202 aa21.24■□□□□ 0.99
AC116003.1-201ENST00000578340 PIP4K2AP48426 406 aaPredicted RBP21.24■□□□□ 0.99
AC116003.1-201ENST00000578340 POLRMTO00411 1230 aaKnown RBP21.23■□□□□ 0.99
AC116003.1-201ENST00000578340 RIPK4P57078 832 aa21.23■□□□□ 0.99
AC116003.1-201ENST00000578340 WDR43Q15061 677 aaKnown RBP eCLIP21.23■□□□□ 0.99
AC116003.1-201ENST00000578340 RRP7AQ9Y3A4 280 aaKnown RBP21.23■□□□□ 0.99
AC116003.1-201ENST00000578340 SCN7AQ01118 1682 aa21.22■□□□□ 0.99
AC116003.1-201ENST00000578340 A0A0G2JLW4 131 aa21.22■□□□□ 0.99
AC116003.1-201ENST00000578340 IL6STP40189 918 aaPredicted RBP21.22■□□□□ 0.99
AC116003.1-201ENST00000578340 TMPOP42166 694 aaKnown RBP21.22■□□□□ 0.99
AC116003.1-201ENST00000578340 NFIXQ14938 502 aa21.22■□□□□ 0.99
AC116003.1-201ENST00000578340 ADAMTS8Q9UP79 889 aa21.22■□□□□ 0.99
AC116003.1-201ENST00000578340 TBC1D2BQ9UPU7 963 aa21.22■□□□□ 0.99
AC116003.1-201ENST00000578340 LAMB4A4D0S4 1761 aa21.21■□□□□ 0.99
AC116003.1-201ENST00000578340 A0A087WZG4 1122 aa21.21■□□□□ 0.99
AC116003.1-201ENST00000578340 ZNF316A6NFI3 1004 aaPredicted RBP21.21■□□□□ 0.99
AC116003.1-201ENST00000578340 GRIN3BO60391 1043 aa21.21■□□□□ 0.99
AC116003.1-201ENST00000578340 BRCA1P38398 1863 aaKnown RBP21.21■□□□□ 0.99
AC116003.1-201ENST00000578340 DPEP1P16444 411 aa21.2■□□□□ 0.98
AC116003.1-201ENST00000578340 TGFB2P61812 414 aa21.2■□□□□ 0.98
AC116003.1-201ENST00000578340 PNISRQ8TF01 805 aaKnown RBP21.2■□□□□ 0.98
AC116003.1-201ENST00000578340 NRXN2Q9P2S2 1712 aa21.19■□□□□ 0.98
AC116003.1-201ENST00000578340 NEUROD2Q15784 382 aa21.19■□□□□ 0.98
AC116003.1-201ENST00000578340 RUNDC1Q96C34 613 aa21.19■□□□□ 0.98
AC116003.1-201ENST00000578340 BCORQ6W2J9 1755 aa21.18■□□□□ 0.98
AC116003.1-201ENST00000578340 EIF4A1P60842 406 aaKnown RBP21.18■□□□□ 0.98
AC116003.1-201ENST00000578340 BICDL1Q6ZP65 573 aa21.18■□□□□ 0.98
AC116003.1-201ENST00000578340 NBPF26B4DH59 902 aa21.17■□□□□ 0.98
AC116003.1-201ENST00000578340 NBPF10Q6P3W6 841 aaKnown RBP21.17■□□□□ 0.98
AC116003.1-201ENST00000578340 NBPF15Q8N660 670 aa21.17■□□□□ 0.98
AC116003.1-201ENST00000578340 GIGYF1O75420 1035 aaPredicted RBP21.16■□□□□ 0.98
AC116003.1-201ENST00000578340 CAMTA2O94983 1202 aa21.16■□□□□ 0.98
AC116003.1-201ENST00000578340 KCNA3P22001 575 aa21.16■□□□□ 0.98
AC116003.1-201ENST00000578340 TBC1D9BQ66K14 1250 aa21.16■□□□□ 0.98
AC116003.1-201ENST00000578340 NPM2Q86SE8 214 aaKnown RBP21.16■□□□□ 0.98
AC116003.1-201ENST00000578340 ZNF784Q8NCA9 323 aaPredicted RBP21.16■□□□□ 0.98
AC116003.1-201ENST00000578340 SERPINB2P05120 415 aa21.15■□□□□ 0.98
AC116003.1-201ENST00000578340 LMOD3Q0VAK6 560 aa21.15■□□□□ 0.98
AC116003.1-201ENST00000578340 CCDC184Q52MB2 194 aa21.15■□□□□ 0.98
AC116003.1-201ENST00000578340 DZIP3Q86Y13 1208 aaKnown RBP21.15■□□□□ 0.98
AC116003.1-201ENST00000578340 TSPYL4Q9UJ04 414 aa21.15■□□□□ 0.98
AC116003.1-201ENST00000578340 CHRNA5P30532 468 aa21.14■□□□□ 0.97
AC116003.1-201ENST00000578340 TRIM35Q9UPQ4 493 aa21.14■□□□□ 0.97
AC116003.1-201ENST00000578340 BCS1LQ9Y276 419 aa21.14■□□□□ 0.97
AC116003.1-201ENST00000578340 ARFGEF1Q9Y6D6 1849 aa21.12■□□□□ 0.97
AC116003.1-201ENST00000578340 ANKRD31Q8N7Z5 1873 aa21.11■□□□□ 0.97
AC116003.1-201ENST00000578340 CARMIL3Q8ND23 1372 aa21.11■□□□□ 0.97
AC116003.1-201ENST00000578340 CCDC24Q8N4L8 307 aa21.09■□□□□ 0.97
AC116003.1-201ENST00000578340 NGEFQ8N5V2 710 aa21.09■□□□□ 0.97
AC116003.1-201ENST00000578340 PIM2Q9P1W9 311 aa21.09■□□□□ 0.97
AC116003.1-201ENST00000578340 DLEC1Q9Y238 1755 aa21.09■□□□□ 0.97
AC116003.1-201ENST00000578340 APAF1O14727 1248 aa21.08■□□□□ 0.97
AC116003.1-201ENST00000578340 SETDB2Q96T68 719 aa21.08■□□□□ 0.97
AC116003.1-201ENST00000578340 BABAM1Q9NWV8 329 aa21.08■□□□□ 0.97
AC116003.1-201ENST00000578340 LAS1LQ9Y4W2 734 aaKnown RBP21.08■□□□□ 0.97
AC116003.1-201ENST00000578340 PRR5LQ6MZQ0 368 aa21.07■□□□□ 0.96
AC116003.1-201ENST00000578340 NUP98P52948 1817 aa21.06■□□□□ 0.96
AC116003.1-201ENST00000578340 CHL1O00533 1208 aa21.06■□□□□ 0.96
AC116003.1-201ENST00000578340 MYL6BP14649 208 aa21.06■□□□□ 0.96
AC116003.1-201ENST00000578340 HLFQ16534 295 aa21.06■□□□□ 0.96
AC116003.1-201ENST00000578340 DALRD3Q5D0E6 543 aaKnown RBP21.06■□□□□ 0.96
AC116003.1-201ENST00000578340 EIF2S2P20042 333 aaKnown RBP21.05■□□□□ 0.96
AC116003.1-201ENST00000578340 KRT24Q2M2I5 525 aa21.05■□□□□ 0.96
AC116003.1-201ENST00000578340 CLEC4GQ6UXB4 293 aa21.05■□□□□ 0.96
AC116003.1-201ENST00000578340 ARHGAP27Q6ZUM4 889 aa21.05■□□□□ 0.96
AC116003.1-201ENST00000578340 ZNF652Q9Y2D9 606 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms