RNA–Protein interactions for RNA: ENST00000578328.6

IKBKE-201, Transcript of inhibitor of nuclear factor kappa B kinase subunit epsilon, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene IKBKE, Length 2,493 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKE-201ENST00000578328 DCAF5Q96JK2 942 aa17.08■□□□□ 0.33
IKBKE-201ENST00000578328 C22orf23Q9BZE7 217 aa17.08■□□□□ 0.33
IKBKE-201ENST00000578328 STRN4Q9NRL3 753 aa17.08■□□□□ 0.33
IKBKE-201ENST00000578328 PXDNLA1KZ92 1463 aa17.08■□□□□ 0.33
IKBKE-201ENST00000578328 GSPT1P15170 499 aaKnown RBP17.08■□□□□ 0.32
IKBKE-201ENST00000578328 BEND3Q5T5X7 828 aa17.08■□□□□ 0.32
IKBKE-201ENST00000578328 ADCY9O60503 1353 aa17.07■□□□□ 0.32
IKBKE-201ENST00000578328 NBPF7P0C2Y1 421 aaPredicted RBP17.07■□□□□ 0.32
IKBKE-201ENST00000578328 ATP8B2P98198 1209 aa17.07■□□□□ 0.32
IKBKE-201ENST00000578328 GZF1Q9H116 711 aaPredicted RBP17.07■□□□□ 0.32
IKBKE-201ENST00000578328 RRAGDQ9NQL2 400 aaPredicted RBP17.07■□□□□ 0.32
IKBKE-201ENST00000578328 N4BP2Q86UW6 1770 aaPredicted RBP17.06■□□□□ 0.32
IKBKE-201ENST00000578328 AIMP1Q12904 312 aaKnown RBP17.06■□□□□ 0.32
IKBKE-201ENST00000578328 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
IKBKE-201ENST00000578328 MAP3K2Q9Y2U5 619 aa17.06■□□□□ 0.32
IKBKE-201ENST00000578328 FAM43AQ8N2R8 423 aa17.06■□□□□ 0.32
IKBKE-201ENST00000578328 TBC1D9Q6ZT07 1266 aa17.05■□□□□ 0.32
IKBKE-201ENST00000578328 COL5A2P05997 1499 aaPredicted RBP17.05■□□□□ 0.32
IKBKE-201ENST00000578328 CABP4P57796 275 aa17.05■□□□□ 0.32
IKBKE-201ENST00000578328 EVA1CP58658 441 aa17.05■□□□□ 0.32
IKBKE-201ENST00000578328 TTC22Q5TAA0 569 aa17.05■□□□□ 0.32
IKBKE-201ENST00000578328 LARP1Q6PKG0 1096 aaKnown RBP17.05■□□□□ 0.32
IKBKE-201ENST00000578328 MYL6BP14649 208 aa17.04■□□□□ 0.32
IKBKE-201ENST00000578328 PDIA6Q15084 440 aa17.04■□□□□ 0.32
IKBKE-201ENST00000578328 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
IKBKE-201ENST00000578328 HYPKQ9NX55 129 aa17.04■□□□□ 0.32
IKBKE-201ENST00000578328 PKD1L3Q7Z443 1732 aa17.04■□□□□ 0.32
IKBKE-201ENST00000578328 KSR2Q6VAB6 950 aa17.04■□□□□ 0.32
IKBKE-201ENST00000578328 ZCRB1Q8TBF4 217 aaKnown RBP17.04■□□□□ 0.32
IKBKE-201ENST00000578328 DDX21Q9NR30 783 aaKnown RBP eCLIP17.04■□□□□ 0.32
IKBKE-201ENST00000578328 HSP90AB1P08238 724 aaKnown RBP17.03■□□□□ 0.32
IKBKE-201ENST00000578328 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
IKBKE-201ENST00000578328 CWF19L2Q2TBE0 894 aaKnown RBP17.03■□□□□ 0.32
IKBKE-201ENST00000578328 PPP1R42Q7Z4L9 355 aa17.03■□□□□ 0.32
IKBKE-201ENST00000578328 PANK2Q9BZ23 570 aa17.03■□□□□ 0.32
IKBKE-201ENST00000578328 ABCA3Q99758 1704 aa17.02■□□□□ 0.32
IKBKE-201ENST00000578328 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.32
IKBKE-201ENST00000578328 DDX54Q8TDD1 881 aaKnown RBP17.02■□□□□ 0.32
IKBKE-201ENST00000578328 NHSL1Q5SYE7 1610 aa17.02■□□□□ 0.31
IKBKE-201ENST00000578328 LRRCC1Q9C099 1032 aa17.02■□□□□ 0.31
IKBKE-201ENST00000578328 C5P01031 1676 aa17.01■□□□□ 0.31
IKBKE-201ENST00000578328 CARD10Q9BWT7 1032 aa17.01■□□□□ 0.31
IKBKE-201ENST00000578328 CDC45O75419 566 aa17.01■□□□□ 0.31
IKBKE-201ENST00000578328 IL2RBP14784 551 aa17.01■□□□□ 0.31
IKBKE-201ENST00000578328 TSHZ3Q63HK5 1081 aa17.01■□□□□ 0.31
IKBKE-201ENST00000578328 PCDH11XQ9BZA7 1347 aa17■□□□□ 0.31
IKBKE-201ENST00000578328 PCDH11YQ9BZA8 1340 aa17■□□□□ 0.31
IKBKE-201ENST00000578328 SRGAP3O43295 1099 aa17■□□□□ 0.31
IKBKE-201ENST00000578328 SNRPA1P09661 255 aaKnown RBP17■□□□□ 0.31
IKBKE-201ENST00000578328 SDSP20132 328 aa17■□□□□ 0.31
IKBKE-201ENST00000578328 SSH3Q8TE77 659 aa17■□□□□ 0.31
IKBKE-201ENST00000578328 C9orf78Q9NZ63 289 aaPredicted RBP17■□□□□ 0.31
IKBKE-201ENST00000578328 PLEKHG2Q9H7P9 1386 aa17■□□□□ 0.31
IKBKE-201ENST00000578328 IBTKQ9P2D0 1353 aaPredicted RBP17■□□□□ 0.31
IKBKE-201ENST00000578328 XRCC6P12956 609 aaKnown RBP eCLIP16.99■□□□□ 0.31
IKBKE-201ENST00000578328 FMNL2Q96PY5 1086 aa16.99■□□□□ 0.31
IKBKE-201ENST00000578328 PDE1AP54750 535 aa16.99■□□□□ 0.31
IKBKE-201ENST00000578328 SURF6O75683 361 aaKnown RBP16.98■□□□□ 0.31
IKBKE-201ENST00000578328 DDX58O95786 925 aaKnown RBP16.98■□□□□ 0.31
IKBKE-201ENST00000578328 COPS6Q7L5N1 327 aa16.98■□□□□ 0.31
IKBKE-201ENST00000578328 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
IKBKE-201ENST00000578328 BTG4Q9NY30 223 aa16.98■□□□□ 0.31
IKBKE-201ENST00000578328 MRC1P22897 1456 aa16.98■□□□□ 0.31
IKBKE-201ENST00000578328 PARP4Q9UKK3 1724 aaKnown RBP16.98■□□□□ 0.31
IKBKE-201ENST00000578328 XAGE3Q8WTP9 111 aa16.98■□□□□ 0.31
IKBKE-201ENST00000578328 IL1RAPL2Q9NP60 686 aa16.98■□□□□ 0.31
IKBKE-201ENST00000578328 ALDH1L1O75891 902 aa16.97■□□□□ 0.31
IKBKE-201ENST00000578328 MCM4P33991 863 aa16.97■□□□□ 0.31
IKBKE-201ENST00000578328 RBM25P49756 843 aaKnown RBP16.97■□□□□ 0.31
IKBKE-201ENST00000578328 POLA2Q14181 598 aa16.97■□□□□ 0.31
IKBKE-201ENST00000578328 LINS1Q8NG48 757 aa16.96■□□□□ 0.31
IKBKE-201ENST00000578328 OSBPL3Q9H4L5 887 aa16.96■□□□□ 0.31
IKBKE-201ENST00000578328 MX1P20591 662 aa16.95■□□□□ 0.3
IKBKE-201ENST00000578328 SALL3Q9BXA9 1300 aa16.94■□□□□ 0.3
IKBKE-201ENST00000578328 IGKV5-2P06315 115 aa16.94■□□□□ 0.3
IKBKE-201ENST00000578328 ERVV-2B6SEH9 535 aa16.94■□□□□ 0.3
IKBKE-201ENST00000578328 GRM8O00222 908 aa16.94■□□□□ 0.3
IKBKE-201ENST00000578328 PTCD1O75127 700 aaKnown RBP16.94■□□□□ 0.3
IKBKE-201ENST00000578328 LRP10Q7Z4F1 713 aa16.94■□□□□ 0.3
IKBKE-201ENST00000578328 ROBO1Q9Y6N7 1651 aa16.94■□□□□ 0.3
IKBKE-201ENST00000578328 NKX1-1Q15270 411 aaPredicted RBP16.93■□□□□ 0.3
IKBKE-201ENST00000578328 ANKRD13DQ6ZTN6 518 aa16.93■□□□□ 0.3
IKBKE-201ENST00000578328 NUTM1Q86Y26 1132 aa16.93■□□□□ 0.3
IKBKE-201ENST00000578328 RHPN1Q8TCX5 695 aa16.93■□□□□ 0.3
IKBKE-201ENST00000578328 MYD88Q99836 296 aa16.93■□□□□ 0.3
IKBKE-201ENST00000578328 FSD2A1L4K1 749 aa16.92■□□□□ 0.3
IKBKE-201ENST00000578328 GOLGA6L3A6NEY3 463 aa16.92■□□□□ 0.3
IKBKE-201ENST00000578328 NEXNQ0ZGT2 675 aa16.92■□□□□ 0.3
IKBKE-201ENST00000578328 L1TD1Q5T7N2 865 aaKnown RBP16.92■□□□□ 0.3
IKBKE-201ENST00000578328 KIF2CQ99661 725 aa16.92■□□□□ 0.3
IKBKE-201ENST00000578328 RAB11FIP3O75154 756 aa16.92■□□□□ 0.3
IKBKE-201ENST00000578328 SUCLG2Q96I99 432 aa16.92■□□□□ 0.3
IKBKE-201ENST00000578328 TRAK2O60296 914 aa16.91■□□□□ 0.3
IKBKE-201ENST00000578328 KAZALD1Q96I82 304 aa16.91■□□□□ 0.3
IKBKE-201ENST00000578328 METTL22Q9BUU2 404 aaPredicted RBP16.91■□□□□ 0.3
IKBKE-201ENST00000578328 SHANK3Q9BYB0 1731 aa16.91■□□□□ 0.3
IKBKE-201ENST00000578328 NEURL1BA8MQ27 555 aa16.91■□□□□ 0.3
IKBKE-201ENST00000578328 CASC1Q6TDU7 716 aa16.91■□□□□ 0.3
IKBKE-201ENST00000578328 PA2G4Q9UQ80 394 aaKnown RBP16.91■□□□□ 0.3
IKBKE-201ENST00000578328 OS9Q13438 667 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms