RNA–Protein interactions for RNA: ENST00000578150.1

TTC39C-205, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 499 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-205ENST00000578150 SIPA1L3O60292 1781 aaPredicted RBP25.92■■□□□ 1.74
TTC39C-205ENST00000578150 FCHSD2O94868 740 aa25.92■■□□□ 1.74
TTC39C-205ENST00000578150 U2AF1L5P0DN76 240 aaPredicted RBP25.92■■□□□ 1.74
TTC39C-205ENST00000578150 U2AF1Q01081 240 aaKnown RBP eCLIP25.92■■□□□ 1.74
TTC39C-205ENST00000578150 DDR1Q08345 913 aa25.92■■□□□ 1.74
TTC39C-205ENST00000578150 USPL1Q5W0Q7 1092 aa25.92■■□□□ 1.74
TTC39C-205ENST00000578150 TEX13AQ9BXU3 409 aaPredicted RBP25.92■■□□□ 1.74
TTC39C-205ENST00000578150 NARFQ9UHQ1 456 aa25.92■■□□□ 1.74
TTC39C-205ENST00000578150 DPEP1P16444 411 aa25.91■■□□□ 1.74
TTC39C-205ENST00000578150 TM4SF1P30408 202 aa25.91■■□□□ 1.74
TTC39C-205ENST00000578150 ZNF496Q96IT1 587 aaPredicted RBP25.9■■□□□ 1.74
TTC39C-205ENST00000578150 BCS1LQ9Y276 419 aa25.9■■□□□ 1.74
TTC39C-205ENST00000578150 HEG1Q9ULI3 1381 aa25.9■■□□□ 1.74
TTC39C-205ENST00000578150 POLRMTO00411 1230 aaKnown RBP25.89■■□□□ 1.74
TTC39C-205ENST00000578150 FMNL2Q96PY5 1086 aa25.88■■□□□ 1.73
TTC39C-205ENST00000578150 A0A087WZG4 1122 aa25.87■■□□□ 1.73
TTC39C-205ENST00000578150 CANXP27824 592 aaKnown RBP25.87■■□□□ 1.73
TTC39C-205ENST00000578150 BRCA1P38398 1863 aaKnown RBP25.87■■□□□ 1.73
TTC39C-205ENST00000578150 KCNA3P22001 575 aa25.86■■□□□ 1.73
TTC39C-205ENST00000578150 EIF5P55010 431 aaKnown RBP25.86■■□□□ 1.73
TTC39C-205ENST00000578150 RTF1Q92541 710 aaKnown RBP25.86■■□□□ 1.73
TTC39C-205ENST00000578150 GPBP1L1Q9HC44 474 aaPredicted RBP25.86■■□□□ 1.73
TTC39C-205ENST00000578150 PIM2Q9P1W9 311 aa25.86■■□□□ 1.73
TTC39C-205ENST00000578150 BTBD11A6QL63 1104 aa25.85■■□□□ 1.73
TTC39C-205ENST00000578150 HTATSF1O43719 755 aaKnown RBP25.84■■□□□ 1.73
TTC39C-205ENST00000578150 NFIXQ14938 502 aa25.84■■□□□ 1.73
TTC39C-205ENST00000578150 BCL2L12Q9HB09 334 aa25.83■■□□□ 1.73
TTC39C-205ENST00000578150 IL6STP40189 918 aaPredicted RBP25.81■■□□□ 1.72
TTC39C-205ENST00000578150 DALRD3Q5D0E6 543 aaKnown RBP25.81■■□□□ 1.72
TTC39C-205ENST00000578150 ARHGAP27Q6ZUM4 889 aa25.81■■□□□ 1.72
TTC39C-205ENST00000578150 ARFGEF1Q9Y6D6 1849 aa25.81■■□□□ 1.72
TTC39C-205ENST00000578150 NRXN2Q9P2S2 1712 aa25.8■■□□□ 1.72
TTC39C-205ENST00000578150 SENP3-EIF4A1A0A087X0R7 540 aa25.79■■□□□ 1.72
TTC39C-205ENST00000578150 NEFMP07197 916 aa25.79■■□□□ 1.72
TTC39C-205ENST00000578150 MCM10Q7L590 875 aa25.79■■□□□ 1.72
TTC39C-205ENST00000578150 KCNQ3O43525 872 aa25.78■■□□□ 1.72
TTC39C-205ENST00000578150 SERPINB2P05120 415 aa25.78■■□□□ 1.72
TTC39C-205ENST00000578150 NPM2Q86SE8 214 aaKnown RBP25.78■■□□□ 1.72
TTC39C-205ENST00000578150 AFDNP55196 1824 aaKnown RBP25.78■■□□□ 1.72
TTC39C-205ENST00000578150 CHRNA5P30532 468 aa25.77■■□□□ 1.72
TTC39C-205ENST00000578150 ZNF526Q8TF50 670 aaPredicted RBP25.77■■□□□ 1.72
TTC39C-205ENST00000578150 SCN7AQ01118 1682 aa25.75■■□□□ 1.71
TTC39C-205ENST00000578150 A1BGP04217 495 aa25.75■■□□□ 1.71
TTC39C-205ENST00000578150 SNRPA1P09661 255 aaKnown RBP25.74■■□□□ 1.71
TTC39C-205ENST00000578150 ZNF330Q9Y3S2 320 aaPredicted RBP25.74■■□□□ 1.71
TTC39C-205ENST00000578150 DCTN1Q14203 1278 aa25.73■■□□□ 1.71
TTC39C-205ENST00000578150 PNNQ9H307 717 aaKnown RBP25.73■■□□□ 1.71
TTC39C-205ENST00000578150 TBC1D2BQ9UPU7 963 aa25.73■■□□□ 1.71
TTC39C-205ENST00000578150 TAF7Q15545 349 aaPredicted RBP25.72■■□□□ 1.71
TTC39C-205ENST00000578150 TBC1D9BQ66K14 1250 aa25.72■■□□□ 1.71
TTC39C-205ENST00000578150 BICDL1Q6ZP65 573 aa25.72■■□□□ 1.71
TTC39C-205ENST00000578150 USP16Q9Y5T5 823 aa25.72■■□□□ 1.71
TTC39C-205ENST00000578150 CARMIL3Q8ND23 1372 aa25.71■■□□□ 1.71
TTC39C-205ENST00000578150 PLEKHF1Q96S99 279 aa25.71■■□□□ 1.71
TTC39C-205ENST00000578150 CAMTA2O94983 1202 aa25.7■■□□□ 1.7
TTC39C-205ENST00000578150 RALBP1Q15311 655 aa25.7■■□□□ 1.7
TTC39C-205ENST00000578150 PDZRN3Q9UPQ7 1066 aa25.7■■□□□ 1.7
TTC39C-205ENST00000578150 DLEC1Q9Y238 1755 aa25.69■■□□□ 1.7
TTC39C-205ENST00000578150 C9orf131Q5VYM1 1079 aa25.69■■□□□ 1.7
TTC39C-205ENST00000578150 H0YIN7 160 aa25.68■■□□□ 1.7
TTC39C-205ENST00000578150 DZIP3Q86Y13 1208 aaKnown RBP25.68■■□□□ 1.7
TTC39C-205ENST00000578150 C2CD5Q86YS7 1000 aa25.68■■□□□ 1.7
TTC39C-205ENST00000578150 PNISRQ8TF01 805 aaKnown RBP25.68■■□□□ 1.7
TTC39C-205ENST00000578150 PRAMEF22A3QJZ6 481 aa25.67■■□□□ 1.7
TTC39C-205ENST00000578150 NFE2L2Q16236 605 aa25.67■■□□□ 1.7
TTC39C-205ENST00000578150 TTLL6Q8N841 843 aa25.67■■□□□ 1.7
TTC39C-205ENST00000578150 SETDB2Q96T68 719 aa25.67■■□□□ 1.7
TTC39C-205ENST00000578150 BRIP1Q9BX63 1249 aa25.67■■□□□ 1.7
TTC39C-205ENST00000578150 KIF3CO14782 793 aa25.66■■□□□ 1.7
TTC39C-205ENST00000578150 DLG5Q8TDM6 1919 aa25.66■■□□□ 1.7
TTC39C-205ENST00000578150 BCORQ6W2J9 1755 aa25.66■■□□□ 1.7
TTC39C-205ENST00000578150 MAPK8IP3Q9UPT6 1336 aa25.65■■□□□ 1.7
TTC39C-205ENST00000578150 RGL2O15211 777 aa25.65■■□□□ 1.7
TTC39C-205ENST00000578150 PDE6BP35913 854 aa25.65■■□□□ 1.7
TTC39C-205ENST00000578150 CLEC4GQ6UXB4 293 aa25.65■■□□□ 1.7
TTC39C-205ENST00000578150 PRR5LQ6MZQ0 368 aa25.64■■□□□ 1.7
TTC39C-205ENST00000578150 ZNF652Q9Y2D9 606 aa25.64■■□□□ 1.7
TTC39C-205ENST00000578150 CNBD1Q8NA66 436 aa25.63■■□□□ 1.69
TTC39C-205ENST00000578150 RNF181Q9P0P0 153 aa25.63■■□□□ 1.69
TTC39C-205ENST00000578150 PIP4K2AP48426 406 aaPredicted RBP25.62■■□□□ 1.69
TTC39C-205ENST00000578150 MIS18AQ9NYP9 233 aa25.62■■□□□ 1.69
TTC39C-205ENST00000578150 ANKRD31Q8N7Z5 1873 aa25.62■■□□□ 1.69
TTC39C-205ENST00000578150 NPHP1O15259 732 aa25.61■■□□□ 1.69
TTC39C-205ENST00000578150 ZC3H4Q9UPT8 1303 aaKnown RBP25.61■■□□□ 1.69
TTC39C-205ENST00000578150 SBF1O95248 1867 aa25.6■■□□□ 1.69
TTC39C-205ENST00000578150 LAMB4A4D0S4 1761 aa25.6■■□□□ 1.69
TTC39C-205ENST00000578150 KDM3BQ7LBC6 1761 aa25.6■■□□□ 1.69
TTC39C-205ENST00000578150 NBPF26B4DH59 902 aa25.6■■□□□ 1.69
TTC39C-205ENST00000578150 ST5P78524 1137 aa25.6■■□□□ 1.69
TTC39C-205ENST00000578150 NBPF10Q6P3W6 841 aaKnown RBP25.6■■□□□ 1.69
TTC39C-205ENST00000578150 NBPF15Q8N660 670 aa25.6■■□□□ 1.69
TTC39C-205ENST00000578150 HSPA6P17066 643 aa25.59■■□□□ 1.69
TTC39C-205ENST00000578150 KDM2BQ8NHM5 1336 aa25.59■■□□□ 1.69
TTC39C-205ENST00000578150 CEP350Q5VT06 3117 aa25.58■■□□□ 1.69
TTC39C-205ENST00000578150 TOMM70O94826 608 aa25.58■■□□□ 1.69
TTC39C-205ENST00000578150 DDX10Q13206 875 aaKnown RBP25.58■■□□□ 1.69
TTC39C-205ENST00000578150 ZNF622Q969S3 477 aaKnown RBP eCLIP25.58■■□□□ 1.69
TTC39C-205ENST00000578150 LMNB1P20700 586 aa25.57■■□□□ 1.68
TTC39C-205ENST00000578150 EIF4A1P60842 406 aaKnown RBP25.57■■□□□ 1.68
TTC39C-205ENST00000578150 NMRK2Q9NPI5 230 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms