RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 RIC3Q7Z5B4 369 aa8.57□□□□□ -1.04
KRT39-203ENST00000578078 METTL3Q86U44 580 aaKnown RBP8.57□□□□□ -1.04
KRT39-203ENST00000578078 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.57□□□□□ -1.04
KRT39-203ENST00000578078 TMEM106CQ9BVX2 250 aa8.57□□□□□ -1.04
KRT39-203ENST00000578078 GGNBP2Q9H3C7 697 aa8.57□□□□□ -1.04
KRT39-203ENST00000578078 CDHR5Q9HBB8 845 aa8.57□□□□□ -1.04
KRT39-203ENST00000578078 CHMP5Q9NZZ3 219 aa8.57□□□□□ -1.04
KRT39-203ENST00000578078 ERBB4Q15303 1308 aa8.57□□□□□ -1.04
KRT39-203ENST00000578078 EDC4Q6P2E9 1401 aaKnown RBP8.57□□□□□ -1.04
KRT39-203ENST00000578078 CEP170BQ9Y4F5 1589 aaPredicted RBP8.57□□□□□ -1.04
KRT39-203ENST00000578078 FYB1O15117 783 aa8.56□□□□□ -1.04
KRT39-203ENST00000578078 SLFN5Q08AF3 891 aa8.56□□□□□ -1.04
KRT39-203ENST00000578078 DUSP27Q5VZP5 1158 aa8.56□□□□□ -1.04
KRT39-203ENST00000578078 FTSJ3Q8IY81 847 aaKnown RBP8.56□□□□□ -1.04
KRT39-203ENST00000578078 UPF1Q92900 1129 aaKnown RBP eCLIP8.56□□□□□ -1.04
KRT39-203ENST00000578078 UPF2Q9HAU5 1272 aaKnown RBP8.56□□□□□ -1.04
KRT39-203ENST00000578078 NDUFB9Q9Y6M9 179 aa8.56□□□□□ -1.04
KRT39-203ENST00000578078 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.56□□□□□ -1.04
KRT39-203ENST00000578078 COL3A1P02461 1466 aaPredicted RBP8.56□□□□□ -1.04
KRT39-203ENST00000578078 ZNF142P52746 1687 aaPredicted RBP8.56□□□□□ -1.04
KRT39-203ENST00000578078 SLC4A3P48751 1232 aa8.56□□□□□ -1.04
KRT39-203ENST00000578078 TEX2Q8IWB9 1127 aa8.56□□□□□ -1.04
KRT39-203ENST00000578078 THEMISQ8N1K5 641 aaPredicted RBP8.56□□□□□ -1.04
KRT39-203ENST00000578078 NLRP7Q8WX94 980 aa8.56□□□□□ -1.04
KRT39-203ENST00000578078 PANK2Q9BZ23 570 aa8.56□□□□□ -1.04
KRT39-203ENST00000578078 CPSF1Q10570 1443 aaKnown RBP8.55□□□□□ -1.04
KRT39-203ENST00000578078 BRD2P25440 801 aaKnown RBP8.55□□□□□ -1.04
KRT39-203ENST00000578078 LTKP29376 864 aa8.55□□□□□ -1.04
KRT39-203ENST00000578078 MICALL2Q8IY33 904 aa8.55□□□□□ -1.04
KRT39-203ENST00000578078 ZNF710Q8N1W2 664 aa8.55□□□□□ -1.04
KRT39-203ENST00000578078 NUDT16Q96DE0 195 aaKnown RBP8.55□□□□□ -1.04
KRT39-203ENST00000578078 USP19O94966 1318 aa8.55□□□□□ -1.04
KRT39-203ENST00000578078 ROBO2Q9HCK4 1378 aa8.55□□□□□ -1.04
KRT39-203ENST00000578078 U2AF1L5P0DN76 240 aaPredicted RBP8.54□□□□□ -1.04
KRT39-203ENST00000578078 FAM193AP78312 1265 aa8.54□□□□□ -1.04
KRT39-203ENST00000578078 U2AF1Q01081 240 aaKnown RBP eCLIP8.54□□□□□ -1.04
KRT39-203ENST00000578078 PTCH1Q13635 1447 aa8.54□□□□□ -1.04
KRT39-203ENST00000578078 NRKQ7Z2Y5 1582 aa8.54□□□□□ -1.04
KRT39-203ENST00000578078 TRMT2AQ8IZ69 625 aaKnown RBP8.54□□□□□ -1.04
KRT39-203ENST00000578078 XRN1Q8IZH2 1706 aaKnown RBP8.54□□□□□ -1.04
KRT39-203ENST00000578078 ALG2Q9H553 416 aa8.54□□□□□ -1.04
KRT39-203ENST00000578078 TMEM51Q9NW97 253 aa8.54□□□□□ -1.04
KRT39-203ENST00000578078 C2orf72A6NCS6 295 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 KIF3CO14782 793 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 SPTLC1O15269 473 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 AP1G2O75843 785 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 OATP04181 439 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 USP17L8P0C7I0 530 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 SASS6Q6UVJ0 657 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.53□□□□□ -1.04
KRT39-203ENST00000578078 TCP11L2Q8N4U5 519 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 GJD4Q96KN9 370 aaPredicted RBP8.53□□□□□ -1.04
KRT39-203ENST00000578078 UCN2Q96RP3 112 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 BCL2L13Q9BXK5 485 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 TFIP11Q9UBB9 837 aaKnown RBP8.53□□□□□ -1.04
KRT39-203ENST00000578078 NOL7Q9UMY1 257 aaKnown RBP8.53□□□□□ -1.04
KRT39-203ENST00000578078 ADAMTSL3P82987 1691 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 NCOA3Q9Y6Q9 1424 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 TSPYL1Q9H0U9 437 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.53□□□□□ -1.04
KRT39-203ENST00000578078 TBX22Q9Y458 520 aa8.53□□□□□ -1.04
KRT39-203ENST00000578078 PNPLA6Q8IY17 1366 aa8.52□□□□□ -1.05
KRT39-203ENST00000578078 U2SURPO15042 1029 aaKnown RBP8.52□□□□□ -1.05
KRT39-203ENST00000578078 DIAPH1O60610 1272 aaKnown RBP8.52□□□□□ -1.05
KRT39-203ENST00000578078 GTF2F1P35269 517 aaKnown RBP eCLIP8.52□□□□□ -1.05
KRT39-203ENST00000578078 HMGN5P82970 282 aaKnown RBP8.52□□□□□ -1.05
KRT39-203ENST00000578078 TSR1Q2NL82 804 aaKnown RBP8.52□□□□□ -1.05
KRT39-203ENST00000578078 NOM1Q5C9Z4 860 aaKnown RBP8.52□□□□□ -1.05
KRT39-203ENST00000578078 CREBRFQ8IUR6 639 aa8.52□□□□□ -1.05
KRT39-203ENST00000578078 WDR63Q8IWG1 891 aa8.52□□□□□ -1.05
KRT39-203ENST00000578078 PRIMPOLQ96LW4 560 aa8.52□□□□□ -1.05
KRT39-203ENST00000578078 CDK12Q9NYV4 1490 aaPredicted RBP8.51□□□□□ -1.05
KRT39-203ENST00000578078 PTPRUQ92729 1446 aa8.51□□□□□ -1.05
KRT39-203ENST00000578078 GPR37L1O60883 481 aa8.51□□□□□ -1.05
KRT39-203ENST00000578078 EN1Q05925 392 aaPredicted RBP8.51□□□□□ -1.05
KRT39-203ENST00000578078 SPIRE2Q8WWL2 714 aa8.51□□□□□ -1.05
KRT39-203ENST00000578078 TBC1D32Q96NH3 1257 aa8.51□□□□□ -1.05
KRT39-203ENST00000578078 SLC26A8Q96RN1 970 aa8.51□□□□□ -1.05
KRT39-203ENST00000578078 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
KRT39-203ENST00000578078 LRRC7Q96NW7 1537 aa8.51□□□□□ -1.05
KRT39-203ENST00000578078 RGPD8O14715 1765 aaPredicted RBP8.51□□□□□ -1.05
KRT39-203ENST00000578078 NALCNQ8IZF0 1738 aa8.51□□□□□ -1.05
KRT39-203ENST00000578078 SETD1BQ9UPS6 1966 aaKnown RBP8.51□□□□□ -1.05
KRT39-203ENST00000578078 AATKQ6ZMQ8 1374 aa8.51□□□□□ -1.05
KRT39-203ENST00000578078 PIK3R4Q99570 1358 aa8.51□□□□□ -1.05
KRT39-203ENST00000578078 UQCRHLA0A096LP55 91 aa8.5□□□□□ -1.05
KRT39-203ENST00000578078 PLIN1O60240 522 aa8.5□□□□□ -1.05
KRT39-203ENST00000578078 EVI5O60447 810 aa8.5□□□□□ -1.05
KRT39-203ENST00000578078 UQCRHP07919 91 aa8.5□□□□□ -1.05
KRT39-203ENST00000578078 QPCTQ16769 361 aa8.5□□□□□ -1.05
KRT39-203ENST00000578078 RSBN1LQ6PCB5 846 aaPredicted RBP8.5□□□□□ -1.05
KRT39-203ENST00000578078 PXYLP1Q8TE99 480 aa8.5□□□□□ -1.05
KRT39-203ENST00000578078 COG3Q96JB2 828 aa8.5□□□□□ -1.05
KRT39-203ENST00000578078 GBP4Q96PP9 640 aa8.5□□□□□ -1.05
KRT39-203ENST00000578078 CRBNQ96SW2 442 aa8.5□□□□□ -1.05
KRT39-203ENST00000578078 DNAJC2Q99543 621 aaKnown RBP8.5□□□□□ -1.05
KRT39-203ENST00000578078 CWC22Q9HCG8 908 aaKnown RBP8.5□□□□□ -1.05
KRT39-203ENST00000578078 RRP7AQ9Y3A4 280 aaKnown RBP8.5□□□□□ -1.05
KRT39-203ENST00000578078 MAFBQ9Y5Q3 323 aaPredicted RBP8.5□□□□□ -1.05
KRT39-203ENST00000578078 CHD2O14647 1828 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms