RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 TSGA10IPQ3SY00 556 aa7.93□□□□□ -1.14
IFT20-205ENST00000578009 TBC1D9Q6ZT07 1266 aa7.93□□□□□ -1.14
IFT20-205ENST00000578009 CD163Q86VB7 1156 aa7.93□□□□□ -1.14
IFT20-205ENST00000578009 PPARGC1BQ86YN6 1023 aaKnown RBP7.93□□□□□ -1.14
IFT20-205ENST00000578009 RNF135Q8IUD6 432 aa7.93□□□□□ -1.14
IFT20-205ENST00000578009 CRISPLD1Q9H336 500 aa7.93□□□□□ -1.14
IFT20-205ENST00000578009 ETNK1Q9HBU6 452 aa7.93□□□□□ -1.14
IFT20-205ENST00000578009 SNRKQ9NRH2 765 aa7.93□□□□□ -1.14
IFT20-205ENST00000578009 DOLKQ9UPQ8 538 aa7.93□□□□□ -1.14
IFT20-205ENST00000578009 CCDC88BA6NC98 1476 aa7.93□□□□□ -1.14
IFT20-205ENST00000578009 ATAD2BQ9ULI0 1458 aa7.93□□□□□ -1.14
IFT20-205ENST00000578009 APBB1O00213 710 aa7.92□□□□□ -1.14
IFT20-205ENST00000578009 ARAFP10398 606 aa7.92□□□□□ -1.14
IFT20-205ENST00000578009 FIGNL1Q6PIW4 674 aa7.92□□□□□ -1.14
IFT20-205ENST00000578009 DGKGP49619 791 aa7.91□□□□□ -1.14
IFT20-205ENST00000578009 AIDAQ96BJ3 306 aa7.91□□□□□ -1.14
IFT20-205ENST00000578009 ZCCHC2Q9C0B9 1178 aaKnown RBP7.91□□□□□ -1.14
IFT20-205ENST00000578009 NOP53Q9NZM5 478 aaKnown RBP7.91□□□□□ -1.14
IFT20-205ENST00000578009 PCDHGC4Q9Y5F7 938 aa7.91□□□□□ -1.14
IFT20-205ENST00000578009 KRTAP4-8A0A0G2JLE6 195 aa7.9□□□□□ -1.14
IFT20-205ENST00000578009 SOCS7O14512 581 aa7.9□□□□□ -1.14
IFT20-205ENST00000578009 CHRNA4P43681 627 aa7.9□□□□□ -1.14
IFT20-205ENST00000578009 SLFNL1Q499Z3 407 aa7.9□□□□□ -1.14
IFT20-205ENST00000578009 OXLD1Q5BKU9 147 aa7.9□□□□□ -1.14
IFT20-205ENST00000578009 ATXN7O15265 892 aaPredicted RBP7.89□□□□□ -1.15
IFT20-205ENST00000578009 CHSY3Q70JA7 882 aa7.89□□□□□ -1.15
IFT20-205ENST00000578009 KRTAP4-12Q9BQ66 201 aa7.89□□□□□ -1.15
IFT20-205ENST00000578009 DNAAF2Q9NVR5 837 aaKnown RBP7.89□□□□□ -1.15
IFT20-205ENST00000578009 NCAPD3P42695 1498 aa7.88□□□□□ -1.15
IFT20-205ENST00000578009 DCDC2BA2VCK2 349 aa7.88□□□□□ -1.15
IFT20-205ENST00000578009 ADH6P28332 368 aa7.88□□□□□ -1.15
IFT20-205ENST00000578009 EIF4G2P78344 907 aaKnown RBP eCLIP7.88□□□□□ -1.15
IFT20-205ENST00000578009 EIF4G1Q04637 1599 aaKnown RBP7.88□□□□□ -1.15
IFT20-205ENST00000578009 CD33P20138 364 aa7.87□□□□□ -1.15
IFT20-205ENST00000578009 ATP4AP20648 1035 aa7.87□□□□□ -1.15
IFT20-205ENST00000578009 GDF10P55107 478 aa7.87□□□□□ -1.15
IFT20-205ENST00000578009 DOC2BQ14184 412 aa7.87□□□□□ -1.15
IFT20-205ENST00000578009 ARSJQ5FYB0 599 aaPredicted RBP7.87□□□□□ -1.15
IFT20-205ENST00000578009 NLRP8Q86W28 1048 aa7.87□□□□□ -1.15
IFT20-205ENST00000578009 PHTF2Q8N3S3 785 aa7.87□□□□□ -1.15
IFT20-205ENST00000578009 C1orf216Q8TAB5 229 aa7.87□□□□□ -1.15
IFT20-205ENST00000578009 SIRT1Q96EB6 747 aa7.87□□□□□ -1.15
IFT20-205ENST00000578009 NIFKQ9BYG3 293 aaKnown RBP7.87□□□□□ -1.15
IFT20-205ENST00000578009 SEMA6BQ9H3T3 888 aa7.87□□□□□ -1.15
IFT20-205ENST00000578009 BAZ1BQ9UIG0 1483 aaKnown RBP7.87□□□□□ -1.15
IFT20-205ENST00000578009 KHNYNO15037 678 aaKnown RBP7.86□□□□□ -1.15
IFT20-205ENST00000578009 MAPTP10636 758 aaKnown RBP7.86□□□□□ -1.15
IFT20-205ENST00000578009 TBC1D2BQ9UPU7 963 aa7.86□□□□□ -1.15
IFT20-205ENST00000578009 A0A1W2PNR3 127 aa7.85□□□□□ -1.15
IFT20-205ENST00000578009 BTBD11A6QL63 1104 aa7.85□□□□□ -1.15
IFT20-205ENST00000578009 INHAP05111 366 aa7.85□□□□□ -1.15
IFT20-205ENST00000578009 SCNN1DP51172 638 aa7.85□□□□□ -1.15
IFT20-205ENST00000578009 TNP2Q05952 138 aa7.85□□□□□ -1.15
IFT20-205ENST00000578009 FCHSD1Q86WN1 690 aa7.85□□□□□ -1.15
IFT20-205ENST00000578009 BCANQ96GW7 911 aa7.85□□□□□ -1.15
IFT20-205ENST00000578009 KLF15Q9UIH9 416 aa7.85□□□□□ -1.15
IFT20-205ENST00000578009 HMGXB3Q12766 1538 aa7.84□□□□□ -1.15
IFT20-205ENST00000578009 SMTNP53814 917 aa7.84□□□□□ -1.15
IFT20-205ENST00000578009 PCBP4P57723 403 aaKnown RBP7.84□□□□□ -1.15
IFT20-205ENST00000578009 SERTAD1Q9UHV2 236 aa7.84□□□□□ -1.15
IFT20-205ENST00000578009 PRR12Q9ULL5 1215 aa7.84□□□□□ -1.15
IFT20-205ENST00000578009 NBPF1Q3BBV0 1214 aa7.83□□□□□ -1.16
IFT20-205ENST00000578009 PLVAPQ9BX97 442 aa7.83□□□□□ -1.16
IFT20-205ENST00000578009 PRM3Q9NNZ6 103 aa7.83□□□□□ -1.16
IFT20-205ENST00000578009 HCN2Q9UL51 889 aa7.83□□□□□ -1.16
IFT20-205ENST00000578009 GJA3Q9Y6H8 435 aa7.83□□□□□ -1.16
IFT20-205ENST00000578009 TATP17735 454 aaPredicted RBP7.82□□□□□ -1.16
IFT20-205ENST00000578009 ITGB7P26010 798 aa7.82□□□□□ -1.16
IFT20-205ENST00000578009 GATA4P43694 442 aa7.82□□□□□ -1.16
IFT20-205ENST00000578009 FAM182BQ5T319 152 aa7.82□□□□□ -1.16
IFT20-205ENST00000578009 TRIM11Q96F44 468 aa7.82□□□□□ -1.16
IFT20-205ENST00000578009 AVENQ9NQS1 362 aaPredicted RBP7.82□□□□□ -1.16
IFT20-205ENST00000578009 ZMYM1Q5SVZ6 1142 aa7.81□□□□□ -1.16
IFT20-205ENST00000578009 SPATA31C1P0DKV0 1188 aa7.8□□□□□ -1.16
IFT20-205ENST00000578009 VAC14Q08AM6 782 aa7.8□□□□□ -1.16
IFT20-205ENST00000578009 IRF5Q13568 498 aa7.8□□□□□ -1.16
IFT20-205ENST00000578009 ZNF468Q5VIY5 522 aaPredicted RBP7.8□□□□□ -1.16
IFT20-205ENST00000578009 ZIC5Q96T25 663 aa7.8□□□□□ -1.16
IFT20-205ENST00000578009 CABP1Q9NZU7 370 aa7.8□□□□□ -1.16
IFT20-205ENST00000578009 BICDL1Q6ZP65 573 aa7.79□□□□□ -1.16
IFT20-205ENST00000578009 STRN4Q9NRL3 753 aa7.79□□□□□ -1.16
IFT20-205ENST00000578009 CHIC2Q9UKJ5 165 aa7.79□□□□□ -1.16
IFT20-205ENST00000578009 A6NJY4 79 aa7.78□□□□□ -1.16
IFT20-205ENST00000578009 CDK2AP1O14519 115 aa7.78□□□□□ -1.16
IFT20-205ENST00000578009 FAM157BP0CG42 384 aa7.78□□□□□ -1.16
IFT20-205ENST00000578009 BRPF1P55201 1214 aaPredicted RBP7.78□□□□□ -1.16
IFT20-205ENST00000578009 MAP7D1Q3KQU3 841 aa7.78□□□□□ -1.16
IFT20-205ENST00000578009 PLPP7Q8NBV4 271 aa7.78□□□□□ -1.16
IFT20-205ENST00000578009 ZDHHC3Q9NYG2 299 aa7.78□□□□□ -1.16
IFT20-205ENST00000578009 MARK1Q9P0L2 795 aa7.78□□□□□ -1.16
IFT20-205ENST00000578009 PARP3Q9Y6F1 533 aa7.78□□□□□ -1.16
IFT20-205ENST00000578009 USP3Q9Y6I4 520 aa7.78□□□□□ -1.16
IFT20-205ENST00000578009 LOC105371045A0A1W2PR82 267 aa7.77□□□□□ -1.17
IFT20-205ENST00000578009 TMEM229AB2RXF0 380 aa7.77□□□□□ -1.17
IFT20-205ENST00000578009 ALAS2P22557 587 aa7.77□□□□□ -1.17
IFT20-205ENST00000578009 IQSEC3Q9UPP2 1182 aaPredicted RBP7.77□□□□□ -1.17
IFT20-205ENST00000578009 SCO2A0A1W2PP80 73 aa7.76□□□□□ -1.17
IFT20-205ENST00000578009 SPDYE3A6NKU9 549 aa7.76□□□□□ -1.17
IFT20-205ENST00000578009 PRRT3Q5FWE3 981 aa7.76□□□□□ -1.17
IFT20-205ENST00000578009 ZNF295-AS1Q8N0V1 137 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms