RNA–Protein interactions for RNA: ENST00000577589.1

CUEDC1-205, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-205ENST00000577589 CARMIL3Q8ND23 1372 aa17.6■□□□□ 0.41
CUEDC1-205ENST00000577589 FAM161AQ3B820 660 aa17.59■□□□□ 0.41
CUEDC1-205ENST00000577589 INTS5Q6P9B9 1019 aaKnown RBP17.58■□□□□ 0.4
CUEDC1-205ENST00000577589 SCN11AQ9UI33 1791 aa17.57■□□□□ 0.4
CUEDC1-205ENST00000577589 PASKQ96RG2 1323 aa17.56■□□□□ 0.4
CUEDC1-205ENST00000577589 PPM1GO15355 546 aaPredicted RBP17.56■□□□□ 0.4
CUEDC1-205ENST00000577589 PTCD1O75127 700 aaKnown RBP17.55■□□□□ 0.4
CUEDC1-205ENST00000577589 EIF4A2Q14240 407 aaKnown RBP17.55■□□□□ 0.4
CUEDC1-205ENST00000577589 CHADLQ6NUI6 762 aa17.55■□□□□ 0.4
CUEDC1-205ENST00000577589 ADAMTSL1Q8N6G6 1762 aa17.55■□□□□ 0.4
CUEDC1-205ENST00000577589 SOS1Q07889 1333 aaPredicted RBP17.54■□□□□ 0.4
CUEDC1-205ENST00000577589 NFIXQ14938 502 aa17.54■□□□□ 0.4
CUEDC1-205ENST00000577589 USPL1Q5W0Q7 1092 aa17.54■□□□□ 0.4
CUEDC1-205ENST00000577589 CACNA1SQ13698 1873 aa17.53■□□□□ 0.4
CUEDC1-205ENST00000577589 CTCFP49711 727 aaPredicted RBP17.53■□□□□ 0.4
CUEDC1-205ENST00000577589 VEGFBP49765 207 aa17.53■□□□□ 0.4
CUEDC1-205ENST00000577589 ABHD8Q96I13 439 aa17.53■□□□□ 0.4
CUEDC1-205ENST00000577589 BCL2L12Q9HB09 334 aa17.53■□□□□ 0.4
CUEDC1-205ENST00000577589 POLKQ9UBT6 870 aa17.53■□□□□ 0.4
CUEDC1-205ENST00000577589 THSD7BQ9C0I4 1608 aa17.53■□□□□ 0.4
CUEDC1-205ENST00000577589 LBX1P52954 281 aa17.52■□□□□ 0.4
CUEDC1-205ENST00000577589 TTLL6Q8N841 843 aa17.52■□□□□ 0.4
CUEDC1-205ENST00000577589 WBP1LQ9NX94 342 aa17.52■□□□□ 0.4
CUEDC1-205ENST00000577589 SCN4AP35499 1836 aa17.51■□□□□ 0.39
CUEDC1-205ENST00000577589 ARFGEF2Q9Y6D5 1785 aa17.51■□□□□ 0.39
CUEDC1-205ENST00000577589 HSPA8P11142 646 aaKnown RBP17.5■□□□□ 0.39
CUEDC1-205ENST00000577589 CABP4P57796 275 aa17.5■□□□□ 0.39
CUEDC1-205ENST00000577589 ZNF530Q6P9A1 599 aaPredicted RBP17.5■□□□□ 0.39
CUEDC1-205ENST00000577589 C2CD5Q86YS7 1000 aa17.5■□□□□ 0.39
CUEDC1-205ENST00000577589 PCDH10Q9P2E7 1040 aa17.5■□□□□ 0.39
CUEDC1-205ENST00000577589 SCN7AQ01118 1682 aa17.5■□□□□ 0.39
CUEDC1-205ENST00000577589 SLX4Q8IY92 1834 aa17.49■□□□□ 0.39
CUEDC1-205ENST00000577589 HSP90AB1P08238 724 aaKnown RBP17.49■□□□□ 0.39
CUEDC1-205ENST00000577589 COL15A1P39059 1388 aa17.49■□□□□ 0.39
CUEDC1-205ENST00000577589 DNAJC10Q8IXB1 793 aa17.48■□□□□ 0.39
CUEDC1-205ENST00000577589 NFATC2IPQ8NCF5 419 aa17.48■□□□□ 0.39
CUEDC1-205ENST00000577589 MRC1P22897 1456 aa17.48■□□□□ 0.39
CUEDC1-205ENST00000577589 DDNO94850 711 aaPredicted RBP17.47■□□□□ 0.39
CUEDC1-205ENST00000577589 SERPINB2P05120 415 aa17.47■□□□□ 0.39
CUEDC1-205ENST00000577589 ERFEQ4G0M1 354 aa17.47■□□□□ 0.39
CUEDC1-205ENST00000577589 NARFQ9UHQ1 456 aa17.47■□□□□ 0.39
CUEDC1-205ENST00000577589 UBR2Q8IWV8 1755 aa17.47■□□□□ 0.39
CUEDC1-205ENST00000577589 PDE4DIPQ5VU43 2346 aa17.47■□□□□ 0.39
CUEDC1-205ENST00000577589 SLC24A1O60721 1099 aa17.46■□□□□ 0.39
CUEDC1-205ENST00000577589 ZPR1O75312 459 aa17.46■□□□□ 0.39
CUEDC1-205ENST00000577589 ITGBL1O95965 494 aaPredicted RBP17.46■□□□□ 0.39
CUEDC1-205ENST00000577589 DPY19L2Q6NUT2 758 aa17.46■□□□□ 0.39
CUEDC1-205ENST00000577589 AIDAQ96BJ3 306 aa17.46■□□□□ 0.39
CUEDC1-205ENST00000577589 LTBP3Q9NS15 1303 aa17.46■□□□□ 0.38
CUEDC1-205ENST00000577589 RGS19P49795 217 aa17.45■□□□□ 0.38
CUEDC1-205ENST00000577589 AEBP1Q8IUX7 1158 aa17.45■□□□□ 0.38
CUEDC1-205ENST00000577589 ZBTB1Q9Y2K1 713 aa17.45■□□□□ 0.38
CUEDC1-205ENST00000577589 C21orf2O43822 256 aa17.44■□□□□ 0.38
CUEDC1-205ENST00000577589 CYP19A1P11511 503 aaPredicted RBP17.44■□□□□ 0.38
CUEDC1-205ENST00000577589 PLEKHO1Q53GL0 409 aaPredicted RBP17.44■□□□□ 0.38
CUEDC1-205ENST00000577589 LDHDQ86WU2 507 aa17.44■□□□□ 0.38
CUEDC1-205ENST00000577589 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
CUEDC1-205ENST00000577589 TMEM88BA6NKF7 163 aa17.43■□□□□ 0.38
CUEDC1-205ENST00000577589 H0YIN7 160 aa17.43■□□□□ 0.38
CUEDC1-205ENST00000577589 MTHFSP49914 203 aa17.43■□□□□ 0.38
CUEDC1-205ENST00000577589 L3MBTL3Q96JM7 780 aaPredicted RBP17.43■□□□□ 0.38
CUEDC1-205ENST00000577589 TAF1DQ9H5J8 278 aaPredicted RBP17.43■□□□□ 0.38
CUEDC1-205ENST00000577589 ZNF219Q9P2Y4 722 aaPredicted RBP17.43■□□□□ 0.38
CUEDC1-205ENST00000577589 RASSF10A6NK89 507 aa17.41■□□□□ 0.38
CUEDC1-205ENST00000577589 MLLT1Q03111 559 aaPredicted RBP17.41■□□□□ 0.38
CUEDC1-205ENST00000577589 AMOTQ4VCS5 1084 aa17.4■□□□□ 0.38
CUEDC1-205ENST00000577589 TAOK3Q9H2K8 898 aa17.4■□□□□ 0.38
CUEDC1-205ENST00000577589 TNNT2P45379 298 aaPredicted RBP17.39■□□□□ 0.37
CUEDC1-205ENST00000577589 CCDC24Q8N4L8 307 aa17.39■□□□□ 0.37
CUEDC1-205ENST00000577589 ZNF622Q969S3 477 aaKnown RBP eCLIP17.39■□□□□ 0.37
CUEDC1-205ENST00000577589 ZNF541Q9H0D2 1346 aa17.39■□□□□ 0.37
CUEDC1-205ENST00000577589 BCORQ6W2J9 1755 aa17.38■□□□□ 0.37
CUEDC1-205ENST00000577589 SLC39A6Q13433 755 aa17.38■□□□□ 0.37
CUEDC1-205ENST00000577589 C1orf141Q5JVX7 400 aa17.37■□□□□ 0.37
CUEDC1-205ENST00000577589 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
CUEDC1-205ENST00000577589 PRR5LQ6MZQ0 368 aa17.37■□□□□ 0.37
CUEDC1-205ENST00000577589 BICDL1Q6ZP65 573 aa17.37■□□□□ 0.37
CUEDC1-205ENST00000577589 WDR33Q9C0J8 1336 aaKnown RBP17.37■□□□□ 0.37
CUEDC1-205ENST00000577589 IQCA1LA6NCM1 817 aa17.36■□□□□ 0.37
CUEDC1-205ENST00000577589 CCDC85CA6NKD9 419 aa17.36■□□□□ 0.37
CUEDC1-205ENST00000577589 BRIP1Q9BX63 1249 aa17.36■□□□□ 0.37
CUEDC1-205ENST00000577589 SLC52A2Q9HAB3 445 aa17.36■□□□□ 0.37
CUEDC1-205ENST00000577589 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
CUEDC1-205ENST00000577589 LGR6Q9HBX8 967 aa17.35■□□□□ 0.37
CUEDC1-205ENST00000577589 EIF5P55010 431 aaKnown RBP17.34■□□□□ 0.37
CUEDC1-205ENST00000577589 DEFB115Q30KQ5 88 aa17.34■□□□□ 0.37
CUEDC1-205ENST00000577589 CDCA8Q53HL2 280 aa17.34■□□□□ 0.37
CUEDC1-205ENST00000577589 TRPM7Q96QT4 1865 aa17.33■□□□□ 0.37
CUEDC1-205ENST00000577589 COL4A5P29400 1685 aa17.33■□□□□ 0.37
CUEDC1-205ENST00000577589 EAPPQ56P03 285 aaPredicted RBP17.33■□□□□ 0.36
CUEDC1-205ENST00000577589 MAP1SQ66K74 1059 aaPredicted RBP17.33■□□□□ 0.36
CUEDC1-205ENST00000577589 C7orf43Q8WVR3 580 aa17.33■□□□□ 0.36
CUEDC1-205ENST00000577589 CASP8AP2Q9UKL3 1982 aa17.32■□□□□ 0.36
CUEDC1-205ENST00000577589 PDE6BP35913 854 aa17.32■□□□□ 0.36
CUEDC1-205ENST00000577589 MAP2K1Q02750 393 aaPredicted RBP17.32■□□□□ 0.36
CUEDC1-205ENST00000577589 PDZRN3Q9UPQ7 1066 aa17.32■□□□□ 0.36
CUEDC1-205ENST00000577589 SNED1Q8TER0 1413 aa17.31■□□□□ 0.36
CUEDC1-205ENST00000577589 SIPA1L3O60292 1781 aaPredicted RBP17.31■□□□□ 0.36
CUEDC1-205ENST00000577589 SRGNP10124 158 aa17.31■□□□□ 0.36
CUEDC1-205ENST00000577589 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms