RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 DDR1Q08345 913 aa8.75□□□□□ -1.01
SNX11-204ENST00000577310 RC3H1Q5TC82 1133 aaKnown RBP8.75□□□□□ -1.01
SNX11-204ENST00000577310 HACL1Q9UJ83 578 aa8.75□□□□□ -1.01
SNX11-204ENST00000577310 CD163L1Q9NR16 1453 aa8.75□□□□□ -1.01
SNX11-204ENST00000577310 PCDH11XQ9BZA7 1347 aa8.75□□□□□ -1.01
SNX11-204ENST00000577310 PCDH11YQ9BZA8 1340 aa8.75□□□□□ -1.01
SNX11-204ENST00000577310 LTBP3Q9NS15 1303 aa8.75□□□□□ -1.01
SNX11-204ENST00000577310 EPHX2P34913 555 aa8.74□□□□□ -1.01
SNX11-204ENST00000577310 LTV1Q96GA3 475 aaPredicted RBP8.74□□□□□ -1.01
SNX11-204ENST00000577310 HHIPL1Q96JK4 782 aa8.74□□□□□ -1.01
SNX11-204ENST00000577310 KDM2AQ9Y2K7 1162 aa8.74□□□□□ -1.01
SNX11-204ENST00000577310 KIAA0100Q14667 2235 aaKnown RBP8.74□□□□□ -1.01
SNX11-204ENST00000577310 MAP3K19Q56UN5 1328 aa8.74□□□□□ -1.01
SNX11-204ENST00000577310 NRXN2Q9P2S2 1712 aa8.74□□□□□ -1.01
SNX11-204ENST00000577310 RPS6KA4O75676 772 aa8.73□□□□□ -1.01
SNX11-204ENST00000577310 CST9Q5W186 159 aa8.73□□□□□ -1.01
SNX11-204ENST00000577310 CIAPIN1Q6FI81 312 aa8.73□□□□□ -1.01
SNX11-204ENST00000577310 HPS5Q9UPZ3 1129 aa8.73□□□□□ -1.01
SNX11-204ENST00000577310 INSRP06213 1382 aa8.73□□□□□ -1.01
SNX11-204ENST00000577310 LOC105371045A0A1W2PR82 267 aa8.72□□□□□ -1.01
SNX11-204ENST00000577310 POLRMTO00411 1230 aaKnown RBP8.72□□□□□ -1.01
SNX11-204ENST00000577310 TM4SF1P30408 202 aa8.72□□□□□ -1.01
SNX11-204ENST00000577310 FKBP8Q14318 412 aa8.72□□□□□ -1.01
SNX11-204ENST00000577310 PKN2Q16513 984 aaKnown RBP8.72□□□□□ -1.01
SNX11-204ENST00000577310 CTU1Q7Z7A3 348 aaKnown RBP8.72□□□□□ -1.01
SNX11-204ENST00000577310 DCAF11Q8TEB1 546 aa8.72□□□□□ -1.01
SNX11-204ENST00000577310 RAPGEF4Q8WZA2 1011 aa8.72□□□□□ -1.01
SNX11-204ENST00000577310 SAGE1Q9NXZ1 904 aa8.72□□□□□ -1.01
SNX11-204ENST00000577310 CNTNAP4Q9C0A0 1308 aa8.72□□□□□ -1.01
SNX11-204ENST00000577310 KTN1Q86UP2 1357 aaKnown RBP8.72□□□□□ -1.01
SNX11-204ENST00000577310 HTTP42858 3142 aa8.71□□□□□ -1.01
SNX11-204ENST00000577310 H0YIN7 160 aa8.71□□□□□ -1.02
SNX11-204ENST00000577310 SAPCD2Q86UD0 394 aa8.71□□□□□ -1.02
SNX11-204ENST00000577310 TAOK3Q9H2K8 898 aa8.71□□□□□ -1.02
SNX11-204ENST00000577310 COLQQ9Y215 455 aaPredicted RBP8.71□□□□□ -1.02
SNX11-204ENST00000577310 CENPJQ9HC77 1338 aaPredicted RBP8.71□□□□□ -1.02
SNX11-204ENST00000577310 CACNA1SQ13698 1873 aa8.7□□□□□ -1.02
SNX11-204ENST00000577310 LAMA3Q16787 3333 aa8.7□□□□□ -1.02
SNX11-204ENST00000577310 CYP27B1O15528 508 aa8.7□□□□□ -1.02
SNX11-204ENST00000577310 TATP17735 454 aaPredicted RBP8.7□□□□□ -1.02
SNX11-204ENST00000577310 NOGQ13253 232 aa8.7□□□□□ -1.02
SNX11-204ENST00000577310 NKX1-1Q15270 411 aaPredicted RBP8.7□□□□□ -1.02
SNX11-204ENST00000577310 AKAP4Q5JQC9 854 aa8.7□□□□□ -1.02
SNX11-204ENST00000577310 C2CD5Q86YS7 1000 aa8.7□□□□□ -1.02
SNX11-204ENST00000577310 ASAP1Q9ULH1 1129 aa8.7□□□□□ -1.02
SNX11-204ENST00000577310 USP42Q9H9J4 1324 aaKnown RBP8.7□□□□□ -1.02
SNX11-204ENST00000577310 C21orf2O43822 256 aa8.69□□□□□ -1.02
SNX11-204ENST00000577310 TMOD3Q9NYL9 352 aa8.69□□□□□ -1.02
SNX11-204ENST00000577310 RBBP6Q7Z6E9 1792 aaKnown RBP8.68□□□□□ -1.02
SNX11-204ENST00000577310 FMR1Q06787 632 aaKnown RBP eCLIP8.68□□□□□ -1.02
SNX11-204ENST00000577310 NBPF6Q5VWK0 638 aa8.68□□□□□ -1.02
SNX11-204ENST00000577310 NME9Q86XW9 330 aa8.68□□□□□ -1.02
SNX11-204ENST00000577310 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.68□□□□□ -1.02
SNX11-204ENST00000577310 NBPF4Q96M43 638 aa8.68□□□□□ -1.02
SNX11-204ENST00000577310 ATG3Q9NT62 314 aa8.68□□□□□ -1.02
SNX11-204ENST00000577310 SRP68Q9UHB9 627 aaKnown RBP8.68□□□□□ -1.02
SNX11-204ENST00000577310 PDZRN3Q9UPQ7 1066 aa8.68□□□□□ -1.02
SNX11-204ENST00000577310 KDRP35968 1356 aa8.68□□□□□ -1.02
SNX11-204ENST00000577310 ARFGEF2Q9Y6D5 1785 aa8.68□□□□□ -1.02
SNX11-204ENST00000577310 SLX4Q8IY92 1834 aa8.68□□□□□ -1.02
SNX11-204ENST00000577310 HOXC9P31274 260 aa8.67□□□□□ -1.02
SNX11-204ENST00000577310 EVC2Q86UK5 1308 aa8.67□□□□□ -1.02
SNX11-204ENST00000577310 ANKRD31Q8N7Z5 1873 aa8.67□□□□□ -1.02
SNX11-204ENST00000577310 SCN11AQ9UI33 1791 aa8.67□□□□□ -1.02
SNX11-204ENST00000577310 SPTBN5Q9NRC6 3674 aaKnown RBP8.66□□□□□ -1.02
SNX11-204ENST00000577310 RNF123Q5XPI4 1314 aa8.66□□□□□ -1.02
SNX11-204ENST00000577310 SOGA3Q5TF21 947 aa8.66□□□□□ -1.02
SNX11-204ENST00000577310 SLC4A9Q96Q91 983 aa8.66□□□□□ -1.02
SNX11-204ENST00000577310 ZNF541Q9H0D2 1346 aa8.65□□□□□ -1.02
SNX11-204ENST00000577310 TRAF5O00463 557 aa8.65□□□□□ -1.02
SNX11-204ENST00000577310 GPC2Q8N158 579 aa8.65□□□□□ -1.02
SNX11-204ENST00000577310 SBNO2Q9Y2G9 1366 aa8.64□□□□□ -1.03
SNX11-204ENST00000577310 COL11A2P13942 1736 aaPredicted RBP8.64□□□□□ -1.03
SNX11-204ENST00000577310 TRPA1O75762 1119 aa8.64□□□□□ -1.03
SNX11-204ENST00000577310 CELF2O95319 508 aaKnown RBP8.64□□□□□ -1.03
SNX11-204ENST00000577310 AMPHP49418 695 aa8.64□□□□□ -1.03
SNX11-204ENST00000577310 ZNF622Q969S3 477 aaKnown RBP eCLIP8.64□□□□□ -1.03
SNX11-204ENST00000577310 ZIC5Q96T25 663 aa8.64□□□□□ -1.03
SNX11-204ENST00000577310 RNF186Q9NXI6 227 aa8.64□□□□□ -1.03
SNX11-204ENST00000577310 PAPPA2Q9BXP8 1791 aa8.63□□□□□ -1.03
SNX11-204ENST00000577310 ZPR1O75312 459 aa8.63□□□□□ -1.03
SNX11-204ENST00000577310 SERPINB2P05120 415 aa8.63□□□□□ -1.03
SNX11-204ENST00000577310 BICDL1Q6ZP65 573 aa8.63□□□□□ -1.03
SNX11-204ENST00000577310 USP50Q70EL3 339 aaPredicted RBP8.63□□□□□ -1.03
SNX11-204ENST00000577310 USHBP1Q8N6Y0 703 aa8.63□□□□□ -1.03
SNX11-204ENST00000577310 OTUD5Q96G74 571 aa8.63□□□□□ -1.03
SNX11-204ENST00000577310 COL25A1Q9BXS0 654 aaPredicted RBP8.63□□□□□ -1.03
SNX11-204ENST00000577310 MUC3AQ02505 3323 aa8.63□□□□□ -1.03
SNX11-204ENST00000577310 FZD9O00144 591 aa8.62□□□□□ -1.03
SNX11-204ENST00000577310 NFIXQ14938 502 aa8.62□□□□□ -1.03
SNX11-204ENST00000577310 FBXO46Q6PJ61 603 aaPredicted RBP8.62□□□□□ -1.03
SNX11-204ENST00000577310 MPNDQ8N594 471 aa8.62□□□□□ -1.03
SNX11-204ENST00000577310 RBM42Q9BTD8 480 aaKnown RBP8.62□□□□□ -1.03
SNX11-204ENST00000577310 BCORQ6W2J9 1755 aa8.61□□□□□ -1.03
SNX11-204ENST00000577310 LMOD1P29536 600 aaPredicted RBP8.61□□□□□ -1.03
SNX11-204ENST00000577310 PDE6BP35913 854 aa8.61□□□□□ -1.03
SNX11-204ENST00000577310 USPL1Q5W0Q7 1092 aa8.61□□□□□ -1.03
SNX11-204ENST00000577310 INTS3Q68E01 1043 aaKnown RBP8.61□□□□□ -1.03
SNX11-204ENST00000577310 CNKSR1Q969H4 720 aa8.61□□□□□ -1.03
SNX11-204ENST00000577310 PRDM6Q9NQX0 595 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms