RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 FRAT1Q92837 279 aaPredicted RBP15.85■□□□□ 0.13
TSEN54-204ENST00000577197 BCL2L13Q9BXK5 485 aa15.85■□□□□ 0.13
TSEN54-204ENST00000577197 TEX13AQ9BXU3 409 aaPredicted RBP15.85■□□□□ 0.13
TSEN54-204ENST00000577197 DBF4Q9UBU7 674 aaPredicted RBP15.85■□□□□ 0.13
TSEN54-204ENST00000577197 MVPQ14764 893 aaKnown RBP15.84■□□□□ 0.13
TSEN54-204ENST00000577197 DDX19BQ9UMR2 479 aa15.84■□□□□ 0.13
TSEN54-204ENST00000577197 C5P01031 1676 aa15.83■□□□□ 0.13
TSEN54-204ENST00000577197 KCNQ3O43525 872 aa15.83■□□□□ 0.12
TSEN54-204ENST00000577197 SLC4A2P04920 1241 aa15.83■□□□□ 0.12
TSEN54-204ENST00000577197 ZNF496Q96IT1 587 aaPredicted RBP15.83■□□□□ 0.12
TSEN54-204ENST00000577197 ATG3Q9NT62 314 aa15.83■□□□□ 0.12
TSEN54-204ENST00000577197 SF3B2Q13435 895 aaKnown RBP15.82■□□□□ 0.12
TSEN54-204ENST00000577197 C20orf194Q5TEA3 1177 aa15.82■□□□□ 0.12
TSEN54-204ENST00000577197 PTF1AQ7RTS3 328 aa15.82■□□□□ 0.12
TSEN54-204ENST00000577197 EXOC6Q8TAG9 804 aa15.82■□□□□ 0.12
TSEN54-204ENST00000577197 CRBNQ96SW2 442 aa15.82■□□□□ 0.12
TSEN54-204ENST00000577197 HYPKQ9NX55 129 aa15.82■□□□□ 0.12
TSEN54-204ENST00000577197 ASAP1Q9ULH1 1129 aa15.82■□□□□ 0.12
TSEN54-204ENST00000577197 BTAF1O14981 1849 aa15.82■□□□□ 0.12
TSEN54-204ENST00000577197 PLSCR1O15162 318 aa15.81■□□□□ 0.12
TSEN54-204ENST00000577197 IRX6P78412 446 aaPredicted RBP15.81■□□□□ 0.12
TSEN54-204ENST00000577197 SLC39A6Q13433 755 aa15.81■□□□□ 0.12
TSEN54-204ENST00000577197 INTS3Q68E01 1043 aaKnown RBP15.81■□□□□ 0.12
TSEN54-204ENST00000577197 ILDR2Q71H61 639 aa15.81■□□□□ 0.12
TSEN54-204ENST00000577197 PALLDQ8WX93 1383 aa15.81■□□□□ 0.12
TSEN54-204ENST00000577197 DDX21Q9NR30 783 aaKnown RBP eCLIP15.81■□□□□ 0.12
TSEN54-204ENST00000577197 KAT6BQ8WYB5 2073 aa15.8■□□□□ 0.12
TSEN54-204ENST00000577197 TNS1Q9HBL0 1735 aaKnown RBP15.8■□□□□ 0.12
TSEN54-204ENST00000577197 APBA3O96018 575 aa15.8■□□□□ 0.12
TSEN54-204ENST00000577197 FLIIQ13045 1269 aa15.8■□□□□ 0.12
TSEN54-204ENST00000577197 RLBP1P12271 317 aa15.79■□□□□ 0.12
TSEN54-204ENST00000577197 HMGB2P26583 209 aaKnown RBP15.79■□□□□ 0.12
TSEN54-204ENST00000577197 PANK1Q8TE04 598 aa15.79■□□□□ 0.12
TSEN54-204ENST00000577197 ATP10DQ9P241 1426 aa15.78■□□□□ 0.12
TSEN54-204ENST00000577197 BAG6P46379 1132 aa15.78■□□□□ 0.12
TSEN54-204ENST00000577197 CCT4P50991 539 aaKnown RBP15.78■□□□□ 0.12
TSEN54-204ENST00000577197 CLUAP1Q96AJ1 413 aa15.78■□□□□ 0.12
TSEN54-204ENST00000577197 RGPD3A6NKT7 1758 aaPredicted RBP15.77■□□□□ 0.12
TSEN54-204ENST00000577197 RGPD4Q7Z3J3 1758 aa15.77■□□□□ 0.12
TSEN54-204ENST00000577197 LOC102724428A0A0B4J2F2 783 aa15.77■□□□□ 0.12
TSEN54-204ENST00000577197 SIK1P57059 783 aa15.77■□□□□ 0.12
TSEN54-204ENST00000577197 COG6Q9Y2V7 657 aa15.77■□□□□ 0.12
TSEN54-204ENST00000577197 PTCD1O75127 700 aaKnown RBP15.76■□□□□ 0.11
TSEN54-204ENST00000577197 DDX58O95786 925 aaKnown RBP15.76■□□□□ 0.11
TSEN54-204ENST00000577197 PDIA6Q15084 440 aa15.76■□□□□ 0.11
TSEN54-204ENST00000577197 SLC27A3Q5K4L6 730 aa15.76■□□□□ 0.11
TSEN54-204ENST00000577197 UPF1Q92900 1129 aaKnown RBP eCLIP15.76■□□□□ 0.11
TSEN54-204ENST00000577197 CCDC136Q96JN2 1154 aa15.76■□□□□ 0.11
TSEN54-204ENST00000577197 RBM42Q9BTD8 480 aaKnown RBP15.76■□□□□ 0.11
TSEN54-204ENST00000577197 CHPF2Q9P2E5 772 aa15.76■□□□□ 0.11
TSEN54-204ENST00000577197 LY75O60449 1722 aa15.76■□□□□ 0.11
TSEN54-204ENST00000577197 EIF2S2P20042 333 aaKnown RBP15.75■□□□□ 0.11
TSEN54-204ENST00000577197 TMEM57Q8N5G2 664 aa15.75■□□□□ 0.11
TSEN54-204ENST00000577197 RREB1Q92766 1687 aa15.75■□□□□ 0.11
TSEN54-204ENST00000577197 STARD3NLO95772 234 aa15.74■□□□□ 0.11
TSEN54-204ENST00000577197 ATP6V1AP38606 617 aa15.74■□□□□ 0.11
TSEN54-204ENST00000577197 FKBP5Q13451 457 aaPredicted RBP15.74■□□□□ 0.11
TSEN54-204ENST00000577197 LRP10Q7Z4F1 713 aa15.74■□□□□ 0.11
TSEN54-204ENST00000577197 ITPRIPQ8IWB1 547 aa15.74■□□□□ 0.11
TSEN54-204ENST00000577197 ZBTB40Q9NUA8 1239 aa15.74■□□□□ 0.11
TSEN54-204ENST00000577197 CCNL1Q9UK58 526 aaPredicted RBP15.74■□□□□ 0.11
TSEN54-204ENST00000577197 TJP1Q07157 1748 aa15.74■□□□□ 0.11
TSEN54-204ENST00000577197 TXNRD1Q16881 649 aa15.73■□□□□ 0.11
TSEN54-204ENST00000577197 G2E3Q7L622 706 aa15.73■□□□□ 0.11
TSEN54-204ENST00000577197 SLC4A9Q96Q91 983 aa15.73■□□□□ 0.11
TSEN54-204ENST00000577197 CAMKK2Q96RR4 588 aa15.73■□□□□ 0.11
TSEN54-204ENST00000577197 ZBTB7BO15156 539 aaPredicted RBP15.72■□□□□ 0.11
TSEN54-204ENST00000577197 KSR2Q6VAB6 950 aa15.72■□□□□ 0.11
TSEN54-204ENST00000577197 TNNQ9UQP3 1299 aa15.72■□□□□ 0.11
TSEN54-204ENST00000577197 USP16Q9Y5T5 823 aa15.72■□□□□ 0.11
TSEN54-204ENST00000577197 TCERG1O14776 1098 aaKnown RBP15.71■□□□□ 0.11
TSEN54-204ENST00000577197 EN1Q05925 392 aaPredicted RBP15.71■□□□□ 0.11
TSEN54-204ENST00000577197 CENPQQ7L2Z9 268 aaPredicted RBP15.71■□□□□ 0.11
TSEN54-204ENST00000577197 PELP1Q8IZL8 1130 aaKnown RBP15.71■□□□□ 0.11
TSEN54-204ENST00000577197 DNAAF4Q8WXU2 420 aa15.71■□□□□ 0.11
TSEN54-204ENST00000577197 HDAC5Q9UQL6 1122 aa15.71■□□□□ 0.11
TSEN54-204ENST00000577197 EP400Q96L91 3159 aa15.7■□□□□ 0.1
TSEN54-204ENST00000577197 PRAMEF22A3QJZ6 481 aa15.7■□□□□ 0.1
TSEN54-204ENST00000577197 ALDH1L1O75891 902 aa15.7■□□□□ 0.1
TSEN54-204ENST00000577197 ITPK1Q13572 414 aa15.7■□□□□ 0.1
TSEN54-204ENST00000577197 DEFB132Q7Z7B7 95 aa15.7■□□□□ 0.1
TSEN54-204ENST00000577197 DNAJC10Q8IXB1 793 aa15.7■□□□□ 0.1
TSEN54-204ENST00000577197 PROM2Q8N271 834 aa15.7■□□□□ 0.1
TSEN54-204ENST00000577197 PHAXQ9H814 394 aaKnown RBP15.7■□□□□ 0.1
TSEN54-204ENST00000577197 ADCY9O60503 1353 aa15.7■□□□□ 0.1
TSEN54-204ENST00000577197 KDM2BQ8NHM5 1336 aa15.69■□□□□ 0.1
TSEN54-204ENST00000577197 COL5A3P25940 1745 aaPredicted RBP15.69■□□□□ 0.1
TSEN54-204ENST00000577197 RGL2O15211 777 aa15.69■□□□□ 0.1
TSEN54-204ENST00000577197 GNAI3P08754 354 aa15.69■□□□□ 0.1
TSEN54-204ENST00000577197 HDAC1Q13547 482 aaPredicted RBP15.69■□□□□ 0.1
TSEN54-204ENST00000577197 EZH2Q15910 746 aaKnown RBP15.69■□□□□ 0.1
TSEN54-204ENST00000577197 LRRC4BQ9NT99 713 aa15.69■□□□□ 0.1
TSEN54-204ENST00000577197 CYP19A1P11511 503 aaPredicted RBP15.68■□□□□ 0.1
TSEN54-204ENST00000577197 RC3H1Q5TC82 1133 aaKnown RBP15.68■□□□□ 0.1
TSEN54-204ENST00000577197 NECTIN2Q92692 538 aa15.68■□□□□ 0.1
TSEN54-204ENST00000577197 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
TSEN54-204ENST00000577197 PI4KAP2A4QPH2 592 aa15.67■□□□□ 0.1
TSEN54-204ENST00000577197 PROSER3Q2NL68 480 aa15.67■□□□□ 0.1
TSEN54-204ENST00000577197 BEND3Q5T5X7 828 aa15.67■□□□□ 0.1
TSEN54-204ENST00000577197 PI4KAP1Q8N8J0 262 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms