RNA–Protein interactions for RNA: ENST00000577185.1

TTC39C-204, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3 BASIC

Gene TTC39C, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-204ENST00000577185 SLIT3O75094 1523 aa9.77□□□□□ -0.84
TTC39C-204ENST00000577185 CSB-PGBD3P0DP91 1061 aa9.77□□□□□ -0.85
TTC39C-204ENST00000577185 YY1P25490 414 aa9.77□□□□□ -0.85
TTC39C-204ENST00000577185 ARHGEF25Q86VW2 580 aa9.77□□□□□ -0.85
TTC39C-204ENST00000577185 EMID1Q96A84 441 aaPredicted RBP9.77□□□□□ -0.85
TTC39C-204ENST00000577185 CARD10Q9BWT7 1032 aa9.77□□□□□ -0.85
TTC39C-204ENST00000577185 TSKSQ9UJT2 592 aa9.77□□□□□ -0.85
TTC39C-204ENST00000577185 TTC21BQ7Z4L5 1316 aa9.77□□□□□ -0.85
TTC39C-204ENST00000577185 TTC21AQ8NDW8 1320 aa9.77□□□□□ -0.85
TTC39C-204ENST00000577185 EXOC5O00471 708 aa9.76□□□□□ -0.85
TTC39C-204ENST00000577185 NFX1Q12986 1120 aaKnown RBP9.76□□□□□ -0.85
TTC39C-204ENST00000577185 SPRYD7Q5W111 196 aa9.76□□□□□ -0.85
TTC39C-204ENST00000577185 ZNF598Q86UK7 904 aaKnown RBP9.76□□□□□ -0.85
TTC39C-204ENST00000577185 MARCH10Q8NA82 808 aaPredicted RBP9.76□□□□□ -0.85
TTC39C-204ENST00000577185 EMILIN3Q9NT22 766 aa9.76□□□□□ -0.85
TTC39C-204ENST00000577185 RREB1Q92766 1687 aa9.76□□□□□ -0.85
TTC39C-204ENST00000577185 PARP4Q9UKK3 1724 aaKnown RBP9.76□□□□□ -0.85
TTC39C-204ENST00000577185 BCL9O00512 1426 aa9.75□□□□□ -0.85
TTC39C-204ENST00000577185 CPSF1Q10570 1443 aaKnown RBP9.75□□□□□ -0.85
TTC39C-204ENST00000577185 APLP1P51693 650 aa9.75□□□□□ -0.85
TTC39C-204ENST00000577185 NUP188Q5SRE5 1749 aa9.75□□□□□ -0.85
TTC39C-204ENST00000577185 ROCK2O75116 1388 aaKnown RBP9.75□□□□□ -0.85
TTC39C-204ENST00000577185 NINLQ9Y2I6 1382 aa9.75□□□□□ -0.85
TTC39C-204ENST00000577185 PTF1AQ7RTS3 328 aa9.74□□□□□ -0.85
TTC39C-204ENST00000577185 SIN3AQ96ST3 1273 aa9.74□□□□□ -0.85
TTC39C-204ENST00000577185 KTN1Q86UP2 1357 aaKnown RBP9.74□□□□□ -0.85
TTC39C-204ENST00000577185 CCDC7Q96M83 1385 aa9.74□□□□□ -0.85
TTC39C-204ENST00000577185 QRICH2Q9H0J4 1663 aa9.74□□□□□ -0.85
TTC39C-204ENST00000577185 NEUROD1Q13562 356 aa9.73□□□□□ -0.85
TTC39C-204ENST00000577185 DDX27Q96GQ7 796 aaKnown RBP9.73□□□□□ -0.85
TTC39C-204ENST00000577185 STK32BQ9NY57 414 aa9.73□□□□□ -0.85
TTC39C-204ENST00000577185 PEAK1Q9H792 1746 aa9.73□□□□□ -0.85
TTC39C-204ENST00000577185 LRRC37A3O60309 1634 aa9.72□□□□□ -0.85
TTC39C-204ENST00000577185 TRPM1Q7Z4N2 1603 aa9.72□□□□□ -0.85
TTC39C-204ENST00000577185 PIK3C2AO00443 1686 aa9.72□□□□□ -0.85
TTC39C-204ENST00000577185 TXNRD1Q16881 649 aa9.72□□□□□ -0.85
TTC39C-204ENST00000577185 COL18A1P39060 1754 aa9.71□□□□□ -0.85
TTC39C-204ENST00000577185 ZBTB7AO95365 584 aa9.71□□□□□ -0.86
TTC39C-204ENST00000577185 SLC15A2Q16348 729 aa9.71□□□□□ -0.86
TTC39C-204ENST00000577185 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.71□□□□□ -0.86
TTC39C-204ENST00000577185 HS6ST3Q8IZP7 471 aa9.71□□□□□ -0.86
TTC39C-204ENST00000577185 LARP6Q9BRS8 491 aaKnown RBP9.71□□□□□ -0.86
TTC39C-204ENST00000577185 RNF223E7ERA6 249 aa9.7□□□□□ -0.86
TTC39C-204ENST00000577185 SMAPO00193 183 aa9.7□□□□□ -0.86
TTC39C-204ENST00000577185 GDF9O60383 454 aa9.7□□□□□ -0.86
TTC39C-204ENST00000577185 PDGFDQ9GZP0 370 aaPredicted RBP9.7□□□□□ -0.86
TTC39C-204ENST00000577185 NLRP2Q9NX02 1062 aa9.7□□□□□ -0.86
TTC39C-204ENST00000577185 USP31Q70CQ4 1352 aa9.7□□□□□ -0.86
TTC39C-204ENST00000577185 RGPD3A6NKT7 1758 aaPredicted RBP9.7□□□□□ -0.86
TTC39C-204ENST00000577185 RGPD4Q7Z3J3 1758 aa9.7□□□□□ -0.86
TTC39C-204ENST00000577185 ABCC6O95255 1503 aa9.69□□□□□ -0.86
TTC39C-204ENST00000577185 COPS2P61201 443 aa9.69□□□□□ -0.86
TTC39C-204ENST00000577185 HDGFL2Q7Z4V5 671 aaPredicted RBP9.69□□□□□ -0.86
TTC39C-204ENST00000577185 TMC1Q8TDI8 760 aa9.69□□□□□ -0.86
TTC39C-204ENST00000577185 NFAT5O94916 1531 aa9.68□□□□□ -0.86
TTC39C-204ENST00000577185 TNS2Q63HR2 1409 aa9.68□□□□□ -0.86
TTC39C-204ENST00000577185 SBNO2Q9Y2G9 1366 aa9.68□□□□□ -0.86
TTC39C-204ENST00000577185 TNFRSF10AO00220 468 aa9.68□□□□□ -0.86
TTC39C-204ENST00000577185 IL2RBP14784 551 aa9.68□□□□□ -0.86
TTC39C-204ENST00000577185 ZNF697Q5TEC3 545 aa9.68□□□□□ -0.86
TTC39C-204ENST00000577185 NME9Q86XW9 330 aa9.68□□□□□ -0.86
TTC39C-204ENST00000577185 ACSBG1Q96GR2 724 aa9.68□□□□□ -0.86
TTC39C-204ENST00000577185 CARD11Q9BXL7 1154 aa9.68□□□□□ -0.86
TTC39C-204ENST00000577185 MTFR1LQ9H019 292 aa9.68□□□□□ -0.86
TTC39C-204ENST00000577185 ANKRD24Q8TF21 1146 aa9.67□□□□□ -0.86
TTC39C-204ENST00000577185 SYT17Q9BSW7 474 aa9.67□□□□□ -0.86
TTC39C-204ENST00000577185 TERF2IPQ9NYB0 399 aa9.67□□□□□ -0.86
TTC39C-204ENST00000577185 SBF2Q86WG5 1849 aa9.66□□□□□ -0.86
TTC39C-204ENST00000577185 ZPR1O75312 459 aa9.66□□□□□ -0.86
TTC39C-204ENST00000577185 MFSD10Q14728 455 aa9.66□□□□□ -0.86
TTC39C-204ENST00000577185 SUZ12Q15022 739 aaKnown RBP9.66□□□□□ -0.86
TTC39C-204ENST00000577185 PUS7Q96PZ0 661 aaKnown RBP9.66□□□□□ -0.86
TTC39C-204ENST00000577185 FHDC1Q9C0D6 1143 aaPredicted RBP9.66□□□□□ -0.86
TTC39C-204ENST00000577185 SLC12A5Q9H2X9 1139 aa9.66□□□□□ -0.86
TTC39C-204ENST00000577185 AKAP12Q02952 1782 aa9.65□□□□□ -0.86
TTC39C-204ENST00000577185 CASZ1Q86V15 1759 aa9.65□□□□□ -0.86
TTC39C-204ENST00000577185 RNF40O75150 1001 aa9.65□□□□□ -0.86
TTC39C-204ENST00000577185 CRIPAKQ8N1N5 446 aa9.65□□□□□ -0.86
TTC39C-204ENST00000577185 DACH1Q9UI36 760 aa9.65□□□□□ -0.86
TTC39C-204ENST00000577185 WNK3Q9BYP7 1800 aa9.65□□□□□ -0.86
TTC39C-204ENST00000577185 EDC4Q6P2E9 1401 aaKnown RBP9.65□□□□□ -0.87
TTC39C-204ENST00000577185 IP6K1Q92551 441 aa9.64□□□□□ -0.87
TTC39C-204ENST00000577185 ARXQ96QS3 562 aa9.64□□□□□ -0.87
TTC39C-204ENST00000577185 RYDENQ9NUL5 291 aaKnown RBP9.64□□□□□ -0.87
TTC39C-204ENST00000577185 GMPR2Q9P2T1 348 aaKnown RBP9.64□□□□□ -0.87
TTC39C-204ENST00000577185 CD163L1Q9NR16 1453 aa9.64□□□□□ -0.87
TTC39C-204ENST00000577185 SLC27A3Q5K4L6 730 aa9.63□□□□□ -0.87
TTC39C-204ENST00000577185 LCE2CQ5TA81 110 aa9.63□□□□□ -0.87
TTC39C-204ENST00000577185 LIAT1Q6ZQX7 453 aa9.63□□□□□ -0.87
TTC39C-204ENST00000577185 DDX54Q8TDD1 881 aaKnown RBP9.63□□□□□ -0.87
TTC39C-204ENST00000577185 RGPD5Q99666 1765 aa9.63□□□□□ -0.87
TTC39C-204ENST00000577185 MON2Q7Z3U7 1717 aa9.62□□□□□ -0.87
TTC39C-204ENST00000577185 SLC24A1O60721 1099 aa9.62□□□□□ -0.87
TTC39C-204ENST00000577185 ANKLE1Q8NAG6 615 aa9.62□□□□□ -0.87
TTC39C-204ENST00000577185 ZNF784Q8NCA9 323 aaPredicted RBP9.62□□□□□ -0.87
TTC39C-204ENST00000577185 SLC16A10Q8TF71 515 aa9.62□□□□□ -0.87
TTC39C-204ENST00000577185 LTV1Q96GA3 475 aaPredicted RBP9.62□□□□□ -0.87
TTC39C-204ENST00000577185 COG3Q96JB2 828 aa9.62□□□□□ -0.87
TTC39C-204ENST00000577185 LRRC4BQ9NT99 713 aa9.62□□□□□ -0.87
TTC39C-204ENST00000577185 A0A1W2PP64 1363 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms