RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 PRKRIP1Q9H875 184 aaPredicted RBP18.26■□□□□ 0.51
NDE1-211ENST00000576502 USP42Q9H9J4 1324 aaKnown RBP18.25■□□□□ 0.51
NDE1-211ENST00000576502 GYS1P13807 737 aa18.25■□□□□ 0.51
NDE1-211ENST00000576502 YY1P25490 414 aa18.25■□□□□ 0.51
NDE1-211ENST00000576502 LMOD3Q0VAK6 560 aa18.25■□□□□ 0.51
NDE1-211ENST00000576502 TAF7Q15545 349 aaPredicted RBP18.25■□□□□ 0.51
NDE1-211ENST00000576502 COL15A1P39059 1388 aa18.25■□□□□ 0.51
NDE1-211ENST00000576502 CHD4Q14839 1912 aa18.25■□□□□ 0.51
NDE1-211ENST00000576502 GRIN3BO60391 1043 aa18.24■□□□□ 0.51
NDE1-211ENST00000576502 NLGN2Q8NFZ4 835 aa18.24■□□□□ 0.51
NDE1-211ENST00000576502 ZBTB1Q9Y2K1 713 aa18.24■□□□□ 0.51
NDE1-211ENST00000576502 SNRPA1P09661 255 aaKnown RBP18.22■□□□□ 0.51
NDE1-211ENST00000576502 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
NDE1-211ENST00000576502 DCTN1Q14203 1278 aa18.22■□□□□ 0.51
NDE1-211ENST00000576502 NARFQ9UHQ1 456 aa18.22■□□□□ 0.51
NDE1-211ENST00000576502 ZNF316A6NFI3 1004 aaPredicted RBP18.21■□□□□ 0.51
NDE1-211ENST00000576502 SRP68Q9UHB9 627 aaKnown RBP18.21■□□□□ 0.51
NDE1-211ENST00000576502 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
NDE1-211ENST00000576502 EIF5P55010 431 aaKnown RBP18.19■□□□□ 0.5
NDE1-211ENST00000576502 RIPK4P57078 832 aa18.19■□□□□ 0.5
NDE1-211ENST00000576502 TGFB2P61812 414 aa18.19■□□□□ 0.5
NDE1-211ENST00000576502 FKBP8Q14318 412 aa18.19■□□□□ 0.5
NDE1-211ENST00000576502 USPL1Q5W0Q7 1092 aa18.19■□□□□ 0.5
NDE1-211ENST00000576502 ZNF330Q9Y3S2 320 aaPredicted RBP18.19■□□□□ 0.5
NDE1-211ENST00000576502 KIF13BQ9NQT8 1826 aa18.19■□□□□ 0.5
NDE1-211ENST00000576502 KCNQ3O43525 872 aa18.18■□□□□ 0.5
NDE1-211ENST00000576502 RUNDC1Q96C34 613 aa18.18■□□□□ 0.5
NDE1-211ENST00000576502 C10orf71Q711Q0 1435 aa18.17■□□□□ 0.5
NDE1-211ENST00000576502 TMPOP42166 694 aaKnown RBP18.16■□□□□ 0.5
NDE1-211ENST00000576502 BABAM1Q9NWV8 329 aa18.16■□□□□ 0.5
NDE1-211ENST00000576502 KDM3BQ7LBC6 1761 aa18.16■□□□□ 0.5
NDE1-211ENST00000576502 A1BGP04217 495 aa18.14■□□□□ 0.49
NDE1-211ENST00000576502 TM4SF1P30408 202 aa18.14■□□□□ 0.49
NDE1-211ENST00000576502 CCDC146Q8IYE0 955 aa18.14■□□□□ 0.49
NDE1-211ENST00000576502 LAMB4A4D0S4 1761 aa18.14■□□□□ 0.49
NDE1-211ENST00000576502 POLRMTO00411 1230 aaKnown RBP18.13■□□□□ 0.49
NDE1-211ENST00000576502 ANP32CO43423 234 aa18.13■□□□□ 0.49
NDE1-211ENST00000576502 YBX3P16989 372 aaKnown RBP eCLIP18.13■□□□□ 0.49
NDE1-211ENST00000576502 DDR1Q08345 913 aa18.13■□□□□ 0.49
NDE1-211ENST00000576502 MIS18AQ9NYP9 233 aa18.13■□□□□ 0.49
NDE1-211ENST00000576502 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
NDE1-211ENST00000576502 ADAMTS8Q9UP79 889 aa18.13■□□□□ 0.49
NDE1-211ENST00000576502 ZNF652Q9Y2D9 606 aa18.13■□□□□ 0.49
NDE1-211ENST00000576502 USP16Q9Y5T5 823 aa18.13■□□□□ 0.49
NDE1-211ENST00000576502 SCN7AQ01118 1682 aa18.12■□□□□ 0.49
NDE1-211ENST00000576502 NFIXQ14938 502 aa18.12■□□□□ 0.49
NDE1-211ENST00000576502 NEUROD2Q15784 382 aa18.12■□□□□ 0.49
NDE1-211ENST00000576502 THUMPD2Q9BTF0 503 aaKnown RBP18.12■□□□□ 0.49
NDE1-211ENST00000576502 PXDNLA1KZ92 1463 aa18.12■□□□□ 0.49
NDE1-211ENST00000576502 DZIP3Q86Y13 1208 aaKnown RBP18.11■□□□□ 0.49
NDE1-211ENST00000576502 TBC1D2BQ9UPU7 963 aa18.11■□□□□ 0.49
NDE1-211ENST00000576502 N4BP2Q86UW6 1770 aaPredicted RBP18.1■□□□□ 0.49
NDE1-211ENST00000576502 RGL2O15211 777 aa18.1■□□□□ 0.49
NDE1-211ENST00000576502 GIGYF1O75420 1035 aaPredicted RBP18.1■□□□□ 0.49
NDE1-211ENST00000576502 SERPINB2P05120 415 aa18.1■□□□□ 0.49
NDE1-211ENST00000576502 EIF4A1P60842 406 aaKnown RBP18.1■□□□□ 0.49
NDE1-211ENST00000576502 CARMIL3Q8ND23 1372 aa18.09■□□□□ 0.49
NDE1-211ENST00000576502 A0A0G2JLW4 131 aa18.09■□□□□ 0.49
NDE1-211ENST00000576502 NPHP1O15259 732 aa18.09■□□□□ 0.49
NDE1-211ENST00000576502 DPEP1P16444 411 aa18.09■□□□□ 0.49
NDE1-211ENST00000576502 CLEC4GQ6UXB4 293 aa18.09■□□□□ 0.49
NDE1-211ENST00000576502 BICDL1Q6ZP65 573 aa18.09■□□□□ 0.49
NDE1-211ENST00000576502 SETDB2Q96T68 719 aa18.09■□□□□ 0.49
NDE1-211ENST00000576502 BCL2L12Q9HB09 334 aa18.09■□□□□ 0.49
NDE1-211ENST00000576502 PIM2Q9P1W9 311 aa18.09■□□□□ 0.49
NDE1-211ENST00000576502 PDZRN3Q9UPQ7 1066 aa18.09■□□□□ 0.49
NDE1-211ENST00000576502 RRP7AQ9Y3A4 280 aaKnown RBP18.09■□□□□ 0.49
NDE1-211ENST00000576502 AFDNP55196 1824 aaKnown RBP18.09■□□□□ 0.49
NDE1-211ENST00000576502 ERBB4Q15303 1308 aa18.08■□□□□ 0.49
NDE1-211ENST00000576502 PRAMEF22A3QJZ6 481 aa18.08■□□□□ 0.48
NDE1-211ENST00000576502 CALD1Q05682 793 aaKnown RBP18.08■□□□□ 0.48
NDE1-211ENST00000576502 BCS1LQ9Y276 419 aa18.08■□□□□ 0.48
NDE1-211ENST00000576502 BCORQ6W2J9 1755 aa18.08■□□□□ 0.48
NDE1-211ENST00000576502 KIAA1551Q9HCM1 1747 aa18.07■□□□□ 0.48
NDE1-211ENST00000576502 NRXN2Q9P2S2 1712 aa18.07■□□□□ 0.48
NDE1-211ENST00000576502 CAMTA2O94983 1202 aa18.07■□□□□ 0.48
NDE1-211ENST00000576502 DALRD3Q5D0E6 543 aaKnown RBP18.06■□□□□ 0.48
NDE1-211ENST00000576502 TBC1D9BQ66K14 1250 aa18.06■□□□□ 0.48
NDE1-211ENST00000576502 WWC3Q9ULE0 1092 aa18.06■□□□□ 0.48
NDE1-211ENST00000576502 BRCA1P38398 1863 aaKnown RBP18.05■□□□□ 0.48
NDE1-211ENST00000576502 PIP4K2AP48426 406 aaPredicted RBP18.05■□□□□ 0.48
NDE1-211ENST00000576502 ST5P78524 1137 aa18.05■□□□□ 0.48
NDE1-211ENST00000576502 KIF6Q6ZMV9 814 aa18.05■□□□□ 0.48
NDE1-211ENST00000576502 NBPF26B4DH59 902 aa18.04■□□□□ 0.48
NDE1-211ENST00000576502 PDE6BP35913 854 aa18.04■□□□□ 0.48
NDE1-211ENST00000576502 NBPF10Q6P3W6 841 aaKnown RBP18.04■□□□□ 0.48
NDE1-211ENST00000576502 NBPF15Q8N660 670 aa18.04■□□□□ 0.48
NDE1-211ENST00000576502 CNBD1Q8NA66 436 aa18.04■□□□□ 0.48
NDE1-211ENST00000576502 ZNF784Q8NCA9 323 aaPredicted RBP18.04■□□□□ 0.48
NDE1-211ENST00000576502 LAS1LQ9Y4W2 734 aaKnown RBP18.04■□□□□ 0.48
NDE1-211ENST00000576502 ARFGEF1Q9Y6D6 1849 aa18.04■□□□□ 0.48
NDE1-211ENST00000576502 H0YIN7 160 aa18.03■□□□□ 0.48
NDE1-211ENST00000576502 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
NDE1-211ENST00000576502 TRIM35Q9UPQ4 493 aa18.03■□□□□ 0.48
NDE1-211ENST00000576502 ERVV-1B6SEH8 477 aa18.02■□□□□ 0.48
NDE1-211ENST00000576502 CHL1O00533 1208 aa18.02■□□□□ 0.48
NDE1-211ENST00000576502 APAF1O14727 1248 aa18.02■□□□□ 0.48
NDE1-211ENST00000576502 NBPF5PQ86XG9 351 aaPredicted RBP18.02■□□□□ 0.48
NDE1-211ENST00000576502 BRIP1Q9BX63 1249 aa18.02■□□□□ 0.48
NDE1-211ENST00000576502 C2CD5Q86YS7 1000 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms