RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 HYPKQ9NX55 129 aa21.02■□□□□ 0.96
ERCC4-208ENST00000576348 ERBB4Q15303 1308 aa21.02■□□□□ 0.95
ERCC4-208ENST00000576348 KAT6BQ8WYB5 2073 aa21.01■□□□□ 0.95
ERCC4-208ENST00000576348 IRX6P78412 446 aaPredicted RBP21.01■□□□□ 0.95
ERCC4-208ENST00000576348 DDX21Q9NR30 783 aaKnown RBP eCLIP21.01■□□□□ 0.95
ERCC4-208ENST00000576348 BRWD3Q6RI45 1802 aa21.01■□□□□ 0.95
ERCC4-208ENST00000576348 MYL6BP14649 208 aa21■□□□□ 0.95
ERCC4-208ENST00000576348 ATF7IPQ6VMQ6 1270 aa21■□□□□ 0.95
ERCC4-208ENST00000576348 NPM2Q86SE8 214 aaKnown RBP21■□□□□ 0.95
ERCC4-208ENST00000576348 CCNL1Q9UK58 526 aaPredicted RBP21■□□□□ 0.95
ERCC4-208ENST00000576348 PTPRCP08575 1304 aa21■□□□□ 0.95
ERCC4-208ENST00000576348 ANXA1P04083 346 aa20.99■□□□□ 0.95
ERCC4-208ENST00000576348 FLIIQ13045 1269 aa20.99■□□□□ 0.95
ERCC4-208ENST00000576348 FKBP5Q13451 457 aaPredicted RBP20.99■□□□□ 0.95
ERCC4-208ENST00000576348 ARHGAP45Q92619 1136 aa20.99■□□□□ 0.95
ERCC4-208ENST00000576348 SLC4A9Q96Q91 983 aa20.99■□□□□ 0.95
ERCC4-208ENST00000576348 UBR2Q8IWV8 1755 aa20.98■□□□□ 0.95
ERCC4-208ENST00000576348 APBA3O96018 575 aa20.98■□□□□ 0.95
ERCC4-208ENST00000576348 DZIP1LQ8IYY4 767 aaKnown RBP20.98■□□□□ 0.95
ERCC4-208ENST00000576348 CLUAP1Q96AJ1 413 aa20.98■□□□□ 0.95
ERCC4-208ENST00000576348 DDX58O95786 925 aaKnown RBP20.97■□□□□ 0.95
ERCC4-208ENST00000576348 CYP19A1P11511 503 aaPredicted RBP20.97■□□□□ 0.95
ERCC4-208ENST00000576348 FKBP8Q14318 412 aa20.97■□□□□ 0.95
ERCC4-208ENST00000576348 PDE3AQ14432 1141 aa20.97■□□□□ 0.95
ERCC4-208ENST00000576348 G2E3Q7L622 706 aa20.97■□□□□ 0.95
ERCC4-208ENST00000576348 ZNF330Q9Y3S2 320 aaPredicted RBP20.97■□□□□ 0.95
ERCC4-208ENST00000576348 A1BGP04217 495 aa20.96■□□□□ 0.95
ERCC4-208ENST00000576348 TRIM27P14373 513 aa20.96■□□□□ 0.95
ERCC4-208ENST00000576348 HMGB2P26583 209 aaKnown RBP20.96■□□□□ 0.95
ERCC4-208ENST00000576348 SF3B2Q13435 895 aaKnown RBP20.96■□□□□ 0.95
ERCC4-208ENST00000576348 ITPK1Q13572 414 aa20.96■□□□□ 0.95
ERCC4-208ENST00000576348 PROSER3Q2NL68 480 aa20.96■□□□□ 0.95
ERCC4-208ENST00000576348 PIP4K2AP48426 406 aaPredicted RBP20.95■□□□□ 0.94
ERCC4-208ENST00000576348 AIMP1Q12904 312 aaKnown RBP20.95■□□□□ 0.94
ERCC4-208ENST00000576348 PHAXQ9H814 394 aaKnown RBP20.95■□□□□ 0.94
ERCC4-208ENST00000576348 CCDC87Q9NVE4 849 aa20.95■□□□□ 0.94
ERCC4-208ENST00000576348 C5P01031 1676 aa20.94■□□□□ 0.94
ERCC4-208ENST00000576348 PDIA6Q15084 440 aa20.94■□□□□ 0.94
ERCC4-208ENST00000576348 PANK1Q8TE04 598 aa20.94■□□□□ 0.94
ERCC4-208ENST00000576348 XAGE3Q8WTP9 111 aa20.94■□□□□ 0.94
ERCC4-208ENST00000576348 BTAF1O14981 1849 aa20.94■□□□□ 0.94
ERCC4-208ENST00000576348 CRKLP46109 303 aaKnown RBP20.93■□□□□ 0.94
ERCC4-208ENST00000576348 C20orf194Q5TEA3 1177 aa20.93■□□□□ 0.94
ERCC4-208ENST00000576348 ARXQ96QS3 562 aa20.93■□□□□ 0.94
ERCC4-208ENST00000576348 NBPF26B4DH59 902 aa20.92■□□□□ 0.94
ERCC4-208ENST00000576348 KCNQ4P56696 695 aa20.92■□□□□ 0.94
ERCC4-208ENST00000576348 SLC27A3Q5K4L6 730 aa20.92■□□□□ 0.94
ERCC4-208ENST00000576348 NBPF14Q5TI25 921 aa20.92■□□□□ 0.94
ERCC4-208ENST00000576348 NBPF10Q6P3W6 841 aaKnown RBP20.92■□□□□ 0.94
ERCC4-208ENST00000576348 SLC4A10Q6U841 1118 aa20.92■□□□□ 0.94
ERCC4-208ENST00000576348 COPS6Q7L5N1 327 aa20.92■□□□□ 0.94
ERCC4-208ENST00000576348 NBPF15Q8N660 670 aa20.92■□□□□ 0.94
ERCC4-208ENST00000576348 TNNQ9UQP3 1299 aa20.92■□□□□ 0.94
ERCC4-208ENST00000576348 LAMB4A4D0S4 1761 aa20.91■□□□□ 0.94
ERCC4-208ENST00000576348 RIC3Q7Z5B4 369 aa20.91■□□□□ 0.94
ERCC4-208ENST00000576348 ITPRIPQ8IWB1 547 aa20.91■□□□□ 0.94
ERCC4-208ENST00000576348 LINC00116Q8NCU8 138 aa20.91■□□□□ 0.94
ERCC4-208ENST00000576348 CRBNQ96SW2 442 aa20.91■□□□□ 0.94
ERCC4-208ENST00000576348 ZBTB1Q9Y2K1 713 aa20.91■□□□□ 0.94
ERCC4-208ENST00000576348 KIF6Q6ZMV9 814 aa20.9■□□□□ 0.94
ERCC4-208ENST00000576348 COG6Q9Y2V7 657 aa20.9■□□□□ 0.94
ERCC4-208ENST00000576348 ABCC4O15439 1325 aa20.89■□□□□ 0.93
ERCC4-208ENST00000576348 CNTNAP4Q9C0A0 1308 aa20.89■□□□□ 0.93
ERCC4-208ENST00000576348 F6X3S4 739 aa20.89■□□□□ 0.93
ERCC4-208ENST00000576348 PLSCR1O15162 318 aa20.89■□□□□ 0.93
ERCC4-208ENST00000576348 RLBP1P12271 317 aa20.89■□□□□ 0.93
ERCC4-208ENST00000576348 IL6STP40189 918 aaPredicted RBP20.89■□□□□ 0.93
ERCC4-208ENST00000576348 TXNRD1Q16881 649 aa20.89■□□□□ 0.93
ERCC4-208ENST00000576348 KSR2Q6VAB6 950 aa20.89■□□□□ 0.93
ERCC4-208ENST00000576348 GTF3C3Q9Y5Q9 886 aa20.89■□□□□ 0.93
ERCC4-208ENST00000576348 SBF2Q86WG5 1849 aa20.89■□□□□ 0.93
ERCC4-208ENST00000576348 PI4KAP2A4QPH2 592 aa20.88■□□□□ 0.93
ERCC4-208ENST00000576348 CCT4P50991 539 aaKnown RBP20.88■□□□□ 0.93
ERCC4-208ENST00000576348 INTS5Q6P9B9 1019 aaKnown RBP20.88■□□□□ 0.93
ERCC4-208ENST00000576348 TMEM57Q8N5G2 664 aa20.88■□□□□ 0.93
ERCC4-208ENST00000576348 PI4KAP1Q8N8J0 262 aa20.88■□□□□ 0.93
ERCC4-208ENST00000576348 DNAAF4Q8WXU2 420 aa20.88■□□□□ 0.93
ERCC4-208ENST00000576348 AK7Q96M32 723 aa20.88■□□□□ 0.93
ERCC4-208ENST00000576348 BAG6P46379 1132 aa20.87■□□□□ 0.93
ERCC4-208ENST00000576348 MVPQ14764 893 aaKnown RBP20.87■□□□□ 0.93
ERCC4-208ENST00000576348 RC3H1Q5TC82 1133 aaKnown RBP20.87■□□□□ 0.93
ERCC4-208ENST00000576348 ANKRD13DQ6ZTN6 518 aa20.87■□□□□ 0.93
ERCC4-208ENST00000576348 CHMP4BQ9H444 224 aaKnown RBP20.87■□□□□ 0.93
ERCC4-208ENST00000576348 MAP3K2Q9Y2U5 619 aa20.87■□□□□ 0.93
ERCC4-208ENST00000576348 A0A087WZG4 1122 aa20.86■□□□□ 0.93
ERCC4-208ENST00000576348 GNPATO15228 680 aa20.86■□□□□ 0.93
ERCC4-208ENST00000576348 NEXNQ0ZGT2 675 aa20.86■□□□□ 0.93
ERCC4-208ENST00000576348 TJP1Q07157 1748 aa20.86■□□□□ 0.93
ERCC4-208ENST00000576348 ERICH6BQ5W0A0 696 aa20.85■□□□□ 0.93
ERCC4-208ENST00000576348 LRP10Q7Z4F1 713 aa20.85■□□□□ 0.93
ERCC4-208ENST00000576348 PLBD2Q8NHP8 589 aa20.85■□□□□ 0.93
ERCC4-208ENST00000576348 EXOC6Q8TAG9 804 aa20.85■□□□□ 0.93
ERCC4-208ENST00000576348 DDX19BQ9UMR2 479 aa20.85■□□□□ 0.93
ERCC4-208ENST00000576348 TTLL7Q6ZT98 887 aa20.84■□□□□ 0.93
ERCC4-208ENST00000576348 ZBTB3Q9H5J0 574 aa20.84■□□□□ 0.93
ERCC4-208ENST00000576348 LRRC4BQ9NT99 713 aa20.84■□□□□ 0.93
ERCC4-208ENST00000576348 RTCBQ9Y3I0 505 aaKnown RBP20.84■□□□□ 0.93
ERCC4-208ENST00000576348 ADCY9O60503 1353 aa20.84■□□□□ 0.93
ERCC4-208ENST00000576348 EIF5P55010 431 aaKnown RBP20.83■□□□□ 0.93
ERCC4-208ENST00000576348 INTS3Q68E01 1043 aaKnown RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms