RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 INTS4Q96HW7 963 aaKnown RBP17.39■□□□□ 0.37
SCARF1-209ENST00000576012 KIF1BO60333 1816 aa17.39■□□□□ 0.37
SCARF1-209ENST00000576012 F13A1P00488 732 aa17.39■□□□□ 0.37
SCARF1-209ENST00000576012 A0A087WWV3 80 aa17.38■□□□□ 0.37
SCARF1-209ENST00000576012 TNNT1P13805 278 aa17.38■□□□□ 0.37
SCARF1-209ENST00000576012 RUFY3Q7L099 469 aa17.38■□□□□ 0.37
SCARF1-209ENST00000576012 SURF6O75683 361 aaKnown RBP17.38■□□□□ 0.37
SCARF1-209ENST00000576012 FOSBP53539 338 aa17.38■□□□□ 0.37
SCARF1-209ENST00000576012 HOMEZQ8IX15 550 aa17.38■□□□□ 0.37
SCARF1-209ENST00000576012 SPTLC3Q9NUV7 552 aa17.38■□□□□ 0.37
SCARF1-209ENST00000576012 ARHGAP31Q2M1Z3 1444 aa17.38■□□□□ 0.37
SCARF1-209ENST00000576012 TPD52L1Q16890 204 aaPredicted RBP17.38■□□□□ 0.37
SCARF1-209ENST00000576012 PNPLA6Q8IY17 1366 aa17.37■□□□□ 0.37
SCARF1-209ENST00000576012 ABCC3O15438 1527 aa17.37■□□□□ 0.37
SCARF1-209ENST00000576012 RPAP1Q9BWH6 1393 aaPredicted RBP17.37■□□□□ 0.37
SCARF1-209ENST00000576012 GOLGA6L4A6NEF3 574 aa17.37■□□□□ 0.37
SCARF1-209ENST00000576012 GTF2F1P35269 517 aaKnown RBP eCLIP17.37■□□□□ 0.373e-7■■■■■ 35.7
SCARF1-209ENST00000576012 NCBP1Q09161 790 aaKnown RBP17.37■□□□□ 0.37
SCARF1-209ENST00000576012 LIG1P18858 919 aa17.37■□□□□ 0.37
SCARF1-209ENST00000576012 BRD2P25440 801 aaKnown RBP17.37■□□□□ 0.37
SCARF1-209ENST00000576012 CEBPZQ03701 1054 aaKnown RBP17.37■□□□□ 0.37
SCARF1-209ENST00000576012 TRMT1Q9NXH9 659 aaKnown RBP17.37■□□□□ 0.37
SCARF1-209ENST00000576012 KIAA1210Q9ULL0 1709 aa17.37■□□□□ 0.37
SCARF1-209ENST00000576012 PPFIA3O75145 1194 aa17.36■□□□□ 0.37
SCARF1-209ENST00000576012 STK3Q13188 491 aa17.36■□□□□ 0.37
SCARF1-209ENST00000576012 KNDC1Q76NI1 1749 aa17.36■□□□□ 0.37
SCARF1-209ENST00000576012 GOLGA6L6A8MZA4 724 aa17.36■□□□□ 0.37
SCARF1-209ENST00000576012 LETM1O95202 739 aaPredicted RBP17.36■□□□□ 0.37
SCARF1-209ENST00000576012 ARID5BQ14865 1188 aa17.36■□□□□ 0.37
SCARF1-209ENST00000576012 RTF1Q92541 710 aaKnown RBP17.36■□□□□ 0.37
SCARF1-209ENST00000576012 ZBTB9Q96C00 473 aa17.36■□□□□ 0.37
SCARF1-209ENST00000576012 NAP1L2Q9ULW6 460 aaPredicted RBP17.36■□□□□ 0.37
SCARF1-209ENST00000576012 SNX14Q9Y5W7 946 aa17.36■□□□□ 0.37
SCARF1-209ENST00000576012 TCHHQ07283 1943 aa17.36■□□□□ 0.37
SCARF1-209ENST00000576012 CCDC192P0DO97 292 aa17.36■□□□□ 0.37
SCARF1-209ENST00000576012 KCNJ4P48050 445 aa17.36■□□□□ 0.37
SCARF1-209ENST00000576012 LMTK2Q8IWU2 1503 aa17.36■□□□□ 0.37
SCARF1-209ENST00000576012 NRXN1Q9ULB1 1477 aa17.35■□□□□ 0.37
SCARF1-209ENST00000576012 RPGRIP1LQ68CZ1 1315 aa17.35■□□□□ 0.37
SCARF1-209ENST00000576012 HSP90AB2PQ58FF8 381 aa17.35■□□□□ 0.37
SCARF1-209ENST00000576012 JAKMIP1Q96N16 626 aaKnown RBP17.35■□□□□ 0.37
SCARF1-209ENST00000576012 YTHDC2Q9H6S0 1430 aaKnown RBP17.35■□□□□ 0.37
SCARF1-209ENST00000576012 ANO6Q4KMQ2 910 aa17.35■□□□□ 0.37
SCARF1-209ENST00000576012 TXNDC2Q86VQ3 553 aa17.35■□□□□ 0.37
SCARF1-209ENST00000576012 ADCK5Q3MIX3 580 aa17.34■□□□□ 0.37
SCARF1-209ENST00000576012 PRPF40BQ6NWY9 871 aaKnown RBP17.34■□□□□ 0.37
SCARF1-209ENST00000576012 STK31Q9BXU1 1019 aa17.34■□□□□ 0.37
SCARF1-209ENST00000576012 ST7Q9NRC1 585 aa17.34■□□□□ 0.37
SCARF1-209ENST00000576012 ARHGEF40Q8TER5 1519 aa17.34■□□□□ 0.37
SCARF1-209ENST00000576012 KIF20AO95235 890 aa17.34■□□□□ 0.37
SCARF1-209ENST00000576012 OS9Q13438 667 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-209ENST00000576012 COL9A3Q14050 684 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-209ENST00000576012 TAOK2Q9UL54 1235 aa17.34■□□□□ 0.37
SCARF1-209ENST00000576012 LIMCH1Q9UPQ0 1083 aa17.34■□□□□ 0.37
SCARF1-209ENST00000576012 DACT1Q9NYF0 836 aa17.33■□□□□ 0.37
SCARF1-209ENST00000576012 CCDC112Q8NEF3 446 aa17.33■□□□□ 0.36
SCARF1-209ENST00000576012 CHL1O00533 1208 aa17.32■□□□□ 0.36
SCARF1-209ENST00000576012 EIF4A2Q14240 407 aaKnown RBP17.32■□□□□ 0.36
SCARF1-209ENST00000576012 PLCD3Q8N3E9 789 aa17.32■□□□□ 0.36
SCARF1-209ENST00000576012 PUS7Q96PZ0 661 aaKnown RBP17.32■□□□□ 0.36
SCARF1-209ENST00000576012 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.32■□□□□ 0.36
SCARF1-209ENST00000576012 HSPA4P34932 840 aa17.32■□□□□ 0.36
SCARF1-209ENST00000576012 TYRO3Q06418 890 aa17.32■□□□□ 0.36
SCARF1-209ENST00000576012 FILIP1Q7Z7B0 1213 aa17.32■□□□□ 0.36
SCARF1-209ENST00000576012 LARP1BQ659C4 914 aaKnown RBP17.32■□□□□ 0.36
SCARF1-209ENST00000576012 NUP62CLQ9H1M0 184 aa17.32■□□□□ 0.36
SCARF1-209ENST00000576012 DNAJC25Q9H1X3 360 aa17.32■□□□□ 0.36
SCARF1-209ENST00000576012 TNMDQ9H2S6 317 aa17.32■□□□□ 0.36
SCARF1-209ENST00000576012 OSBPL3Q9H4L5 887 aa17.32■□□□□ 0.36
SCARF1-209ENST00000576012 CD163L1Q9NR16 1453 aa17.31■□□□□ 0.36
SCARF1-209ENST00000576012 ANAPC15P60006 121 aa17.31■□□□□ 0.36
SCARF1-209ENST00000576012 TTC6Q86TZ1 520 aa17.31■□□□□ 0.36
SCARF1-209ENST00000576012 RGS12O14924 1447 aa17.31■□□□□ 0.36
SCARF1-209ENST00000576012 CAMSAP1Q5T5Y3 1602 aa17.31■□□□□ 0.36
SCARF1-209ENST00000576012 EIF2S2P20042 333 aaKnown RBP17.31■□□□□ 0.36
SCARF1-209ENST00000576012 MAP3K11Q16584 847 aa17.31■□□□□ 0.36
SCARF1-209ENST00000576012 GTF2E1P29083 439 aaPredicted RBP17.31■□□□□ 0.36
SCARF1-209ENST00000576012 ANKRD7Q92527 254 aa17.31■□□□□ 0.36
SCARF1-209ENST00000576012 ERCC4Q92889 916 aaPredicted RBP17.31■□□□□ 0.36
SCARF1-209ENST00000576012 MTMR6Q9Y217 621 aa17.31■□□□□ 0.36
SCARF1-209ENST00000576012 ATP6V1DQ9Y5K8 247 aa17.31■□□□□ 0.36
SCARF1-209ENST00000576012 CDK11BP21127 795 aaKnown RBP17.3■□□□□ 0.36
SCARF1-209ENST00000576012 BICD2Q8TD16 824 aa17.3■□□□□ 0.36
SCARF1-209ENST00000576012 DDX11Q96FC9 970 aa17.3■□□□□ 0.36
SCARF1-209ENST00000576012 CBX8Q9HC52 389 aa17.3■□□□□ 0.36
SCARF1-209ENST00000576012 PDRG1Q9NUG6 133 aa17.3■□□□□ 0.36
SCARF1-209ENST00000576012 USP27XA6NNY8 438 aa17.3■□□□□ 0.36
SCARF1-209ENST00000576012 CCT4P50991 539 aaKnown RBP17.3■□□□□ 0.36
SCARF1-209ENST00000576012 FLIIQ13045 1269 aa17.3■□□□□ 0.36
SCARF1-209ENST00000576012 CDC37L1Q7L3B6 337 aa17.3■□□□□ 0.36
SCARF1-209ENST00000576012 FUCA2Q9BTY2 467 aa17.3■□□□□ 0.36
SCARF1-209ENST00000576012 MYO3AQ8NEV4 1616 aa17.3■□□□□ 0.36
SCARF1-209ENST00000576012 ADGRB3O60242 1522 aa17.29■□□□□ 0.36
SCARF1-209ENST00000576012 PTH1RQ03431 593 aa17.29■□□□□ 0.36
SCARF1-209ENST00000576012 MRVI1Q9Y6F6 885 aa17.29■□□□□ 0.36
SCARF1-209ENST00000576012 PTPRCP08575 1304 aa17.29■□□□□ 0.36
SCARF1-209ENST00000576012 UBTFL1P0CB47 393 aaPredicted RBP17.29■□□□□ 0.36
SCARF1-209ENST00000576012 FAM200AQ8TCP9 573 aa17.29■□□□□ 0.36
SCARF1-209ENST00000576012 ESF1Q9H501 851 aaKnown RBP17.29■□□□□ 0.36
SCARF1-209ENST00000576012 CLIP2Q9UDT6 1046 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms