RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 HMGB1P09429 215 aaKnown RBP12.64□□□□□ -0.39
CALCOCO2-226ENST00000575461 BRD2P25440 801 aaKnown RBP12.64□□□□□ -0.39
CALCOCO2-226ENST00000575461 KCNC4Q03721 635 aa12.64□□□□□ -0.39
CALCOCO2-226ENST00000575461 TBCELQ5QJ74 424 aa12.64□□□□□ -0.39
CALCOCO2-226ENST00000575461 PLA2G2CQ5R387 149 aa12.64□□□□□ -0.39
CALCOCO2-226ENST00000575461 POTEAQ6S8J7 498 aa12.64□□□□□ -0.39
CALCOCO2-226ENST00000575461 NBPF15Q8N660 670 aa12.64□□□□□ -0.39
CALCOCO2-226ENST00000575461 PGPEP1Q9NXJ5 209 aa12.64□□□□□ -0.39
CALCOCO2-226ENST00000575461 PARP2Q9UGN5 583 aa12.64□□□□□ -0.39
CALCOCO2-226ENST00000575461 ADH1CP00326 375 aa12.63□□□□□ -0.39
CALCOCO2-226ENST00000575461 HDLBPQ00341 1268 aaKnown RBP12.63□□□□□ -0.39
CALCOCO2-226ENST00000575461 TMC4Q7Z404 712 aa12.63□□□□□ -0.39
CALCOCO2-226ENST00000575461 IGHA2P01877 340 aa12.62□□□□□ -0.39
CALCOCO2-226ENST00000575461 USP5P45974 858 aa12.62□□□□□ -0.39
CALCOCO2-226ENST00000575461 DUSP9Q99956 384 aaKnown RBP12.62□□□□□ -0.39
CALCOCO2-226ENST00000575461 SORBS3O60504 671 aa12.61□□□□□ -0.39
CALCOCO2-226ENST00000575461 UBXN4Q92575 508 aa12.61□□□□□ -0.39
CALCOCO2-226ENST00000575461 LRFN2Q9ULH4 789 aa12.61□□□□□ -0.39
CALCOCO2-226ENST00000575461 GPR182O15218 404 aa12.6□□□□□ -0.39
CALCOCO2-226ENST00000575461 HIRAP54198 1017 aaPredicted RBP12.6□□□□□ -0.39
CALCOCO2-226ENST00000575461 DAB2P98082 770 aa12.6□□□□□ -0.39
CALCOCO2-226ENST00000575461 TLR1Q15399 786 aa12.6□□□□□ -0.39
CALCOCO2-226ENST00000575461 TMEM87AQ8NBN3 555 aa12.6□□□□□ -0.39
CALCOCO2-226ENST00000575461 ARHGEF10LQ9HCE6 1279 aa12.6□□□□□ -0.39
CALCOCO2-226ENST00000575461 EMILIN1Q9Y6C2 1016 aa12.6□□□□□ -0.39
CALCOCO2-226ENST00000575461 TLL2Q9Y6L7 1015 aa12.6□□□□□ -0.39
CALCOCO2-226ENST00000575461 SERTM1A2A2V5 107 aa12.59□□□□□ -0.39
CALCOCO2-226ENST00000575461 IL2RAP01589 272 aa12.59□□□□□ -0.39
CALCOCO2-226ENST00000575461 ADD1P35611 737 aaKnown RBP12.59□□□□□ -0.39
CALCOCO2-226ENST00000575461 PSMD2Q13200 908 aa12.59□□□□□ -0.39
CALCOCO2-226ENST00000575461 LDLRAD1Q5T700 205 aa12.59□□□□□ -0.39
CALCOCO2-226ENST00000575461 ESYT1Q9BSJ8 1104 aa12.59□□□□□ -0.39
CALCOCO2-226ENST00000575461 METTL5Q9NRN9 209 aaKnown RBP12.59□□□□□ -0.39
CALCOCO2-226ENST00000575461 RAB6BQ9NRW1 208 aa12.59□□□□□ -0.39
CALCOCO2-226ENST00000575461 IQSEC3Q9UPP2 1182 aaPredicted RBP12.59□□□□□ -0.39
CALCOCO2-226ENST00000575461 SIAH2O43255 324 aa12.58□□□□□ -0.4
CALCOCO2-226ENST00000575461 MZF1P28698 734 aaPredicted RBP12.58□□□□□ -0.4
CALCOCO2-226ENST00000575461 TEAD4Q15561 434 aa12.58□□□□□ -0.4
CALCOCO2-226ENST00000575461 ALG1LQ6GMV1 187 aa12.58□□□□□ -0.4
CALCOCO2-226ENST00000575461 ITGBL1O95965 494 aaPredicted RBP12.57□□□□□ -0.4
CALCOCO2-226ENST00000575461 ENOX2Q16206 610 aaKnown RBP12.57□□□□□ -0.4
CALCOCO2-226ENST00000575461 C11orf91Q3C1V1 193 aa12.57□□□□□ -0.4
CALCOCO2-226ENST00000575461 GJD3Q8N144 294 aa12.57□□□□□ -0.4
CALCOCO2-226ENST00000575461 CNKSR1Q969H4 720 aa12.57□□□□□ -0.4
CALCOCO2-226ENST00000575461 HRH3Q9Y5N1 445 aa12.57□□□□□ -0.4
CALCOCO2-226ENST00000575461 EML1O00423 815 aa12.56□□□□□ -0.4
CALCOCO2-226ENST00000575461 RTN1Q16799 776 aa12.56□□□□□ -0.4
CALCOCO2-226ENST00000575461 NIF3L1Q9GZT8 377 aa12.56□□□□□ -0.4
CALCOCO2-226ENST00000575461 VTI1BQ9UEU0 232 aa12.56□□□□□ -0.4
CALCOCO2-226ENST00000575461 POLIQ9UNA4 740 aa12.56□□□□□ -0.4
CALCOCO2-226ENST00000575461 ZBTB39O15060 712 aa12.55□□□□□ -0.4
CALCOCO2-226ENST00000575461 PIK3R5Q8WYR1 880 aa12.55□□□□□ -0.4
CALCOCO2-226ENST00000575461 NGLY1Q96IV0 654 aa12.55□□□□□ -0.4
CALCOCO2-226ENST00000575461 FAM161BQ96MY7 647 aa12.55□□□□□ -0.4
CALCOCO2-226ENST00000575461 PUS7Q96PZ0 661 aaKnown RBP12.55□□□□□ -0.4
CALCOCO2-226ENST00000575461 ADH1AP07327 375 aa12.54□□□□□ -0.4
CALCOCO2-226ENST00000575461 NOS2P35228 1153 aa12.54□□□□□ -0.4
CALCOCO2-226ENST00000575461 CLN3Q13286 438 aa12.54□□□□□ -0.4
CALCOCO2-226ENST00000575461 ATCAYQ86WG3 371 aa12.54□□□□□ -0.4
CALCOCO2-226ENST00000575461 RNF34Q969K3 372 aa12.54□□□□□ -0.4
CALCOCO2-226ENST00000575461 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.54□□□□□ -0.4
CALCOCO2-226ENST00000575461 WWC3Q9ULE0 1092 aa12.54□□□□□ -0.4
CALCOCO2-226ENST00000575461 ZNF232Q9UNY5 417 aa12.54□□□□□ -0.4
CALCOCO2-226ENST00000575461 USP3Q9Y6I4 520 aa12.54□□□□□ -0.4
CALCOCO2-226ENST00000575461 PNMA6FA0A0J9YX94 578 aa12.53□□□□□ -0.4
CALCOCO2-226ENST00000575461 PCSK2P16519 638 aa12.53□□□□□ -0.4
CALCOCO2-226ENST00000575461 C9orf131Q5VYM1 1079 aa12.53□□□□□ -0.4
CALCOCO2-226ENST00000575461 METTL16Q86W50 562 aaKnown RBP12.53□□□□□ -0.4
CALCOCO2-226ENST00000575461 ALDH16A1Q8IZ83 802 aa12.53□□□□□ -0.4
CALCOCO2-226ENST00000575461 FBF1Q8TES7 1133 aa12.53□□□□□ -0.4
CALCOCO2-226ENST00000575461 FRMD6Q96NE9 622 aa12.53□□□□□ -0.4
CALCOCO2-226ENST00000575461 NR3C2P08235 984 aa12.52□□□□□ -0.41
CALCOCO2-226ENST00000575461 HSP90B1P14625 803 aaKnown RBP12.52□□□□□ -0.41
CALCOCO2-226ENST00000575461 RAD51AP2Q09MP3 1159 aa12.52□□□□□ -0.41
CALCOCO2-226ENST00000575461 NT5DC4Q86YG4 428 aa12.52□□□□□ -0.41
CALCOCO2-226ENST00000575461 EDEM1Q92611 657 aa12.52□□□□□ -0.41
CALCOCO2-226ENST00000575461 CABP1Q9NZU7 370 aa12.52□□□□□ -0.41
CALCOCO2-226ENST00000575461 PPP1R1BQ9UD71 204 aaPredicted RBP12.52□□□□□ -0.41
CALCOCO2-226ENST00000575461 WNT7AO00755 349 aa12.51□□□□□ -0.41
CALCOCO2-226ENST00000575461 PDGFAP04085 211 aa12.51□□□□□ -0.41
CALCOCO2-226ENST00000575461 NEFLP07196 543 aa12.51□□□□□ -0.41
CALCOCO2-226ENST00000575461 ZAP70P43403 619 aa12.51□□□□□ -0.41
CALCOCO2-226ENST00000575461 DNM1Q05193 864 aaKnown RBP12.51□□□□□ -0.41
CALCOCO2-226ENST00000575461 DGKZQ13574 1117 aa12.51□□□□□ -0.41
CALCOCO2-226ENST00000575461 FAM26DQ5JW98 314 aa12.51□□□□□ -0.41
CALCOCO2-226ENST00000575461 ETFBKMTQ8IXQ9 262 aa12.51□□□□□ -0.41
CALCOCO2-226ENST00000575461 FAM177A1Q8N128 213 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO2-226ENST00000575461 IFT43Q96FT9 208 aa12.51□□□□□ -0.41
CALCOCO2-226ENST00000575461 TGIF2Q9GZN2 237 aa12.51□□□□□ -0.41
CALCOCO2-226ENST00000575461 CANXP27824 592 aaKnown RBP12.5□□□□□ -0.41
CALCOCO2-226ENST00000575461 GNA15P30679 374 aa12.5□□□□□ -0.41
CALCOCO2-226ENST00000575461 FANCCQ00597 558 aa12.5□□□□□ -0.41
CALCOCO2-226ENST00000575461 PPP1R18Q6NYC8 613 aa12.5□□□□□ -0.41
CALCOCO2-226ENST00000575461 ZDHHC1Q8WTX9 485 aa12.5□□□□□ -0.41
CALCOCO2-226ENST00000575461 L3MBTL2Q969R5 705 aa12.5□□□□□ -0.41
CALCOCO2-226ENST00000575461 HCN4Q9Y3Q4 1203 aa12.5□□□□□ -0.41
CALCOCO2-226ENST00000575461 ZNF76P36508 570 aa12.49□□□□□ -0.41
CALCOCO2-226ENST00000575461 CENPCQ03188 943 aa12.49□□□□□ -0.41
CALCOCO2-226ENST00000575461 FHDC1Q9C0D6 1143 aaPredicted RBP12.49□□□□□ -0.41
CALCOCO2-226ENST00000575461 FAM13BQ9NYF5 915 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms