RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 DLG5Q8TDM6 1919 aa15.91■□□□□ 0.14
USP43-206ENST00000575346 COL15A1P39059 1388 aa15.9■□□□□ 0.14
USP43-206ENST00000575346 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
USP43-206ENST00000575346 MCM10Q7L590 875 aa15.9■□□□□ 0.14
USP43-206ENST00000575346 SRP68Q9UHB9 627 aaKnown RBP15.9■□□□□ 0.14
USP43-206ENST00000575346 C10orf71Q711Q0 1435 aa15.9■□□□□ 0.14
USP43-206ENST00000575346 KIAA1551Q9HCM1 1747 aa15.89■□□□□ 0.13
USP43-206ENST00000575346 GRIN3BO60391 1043 aa15.89■□□□□ 0.13
USP43-206ENST00000575346 YBX3P16989 372 aaKnown RBP eCLIP15.89■□□□□ 0.13
USP43-206ENST00000575346 EIF5P55010 431 aaKnown RBP15.89■□□□□ 0.13
USP43-206ENST00000575346 FKBP8Q14318 412 aa15.89■□□□□ 0.13
USP43-206ENST00000575346 NARFQ9UHQ1 456 aa15.89■□□□□ 0.13
USP43-206ENST00000575346 GOLGB1Q14789 3259 aaKnown RBP15.89■□□□□ 0.13
USP43-206ENST00000575346 KCNQ3O43525 872 aa15.88■□□□□ 0.13
USP43-206ENST00000575346 TM4SF1P30408 202 aa15.88■□□□□ 0.13
USP43-206ENST00000575346 TGFB2P61812 414 aa15.88■□□□□ 0.13
USP43-206ENST00000575346 DCTN1Q14203 1278 aa15.88■□□□□ 0.13
USP43-206ENST00000575346 NFE2L2Q16236 605 aa15.88■□□□□ 0.13
USP43-206ENST00000575346 PARP3Q9Y6F1 533 aa15.88■□□□□ 0.13
USP43-206ENST00000575346 ZPR1O75312 459 aa15.87■□□□□ 0.13
USP43-206ENST00000575346 TAF7Q15545 349 aaPredicted RBP15.87■□□□□ 0.13
USP43-206ENST00000575346 USPL1Q5W0Q7 1092 aa15.87■□□□□ 0.13
USP43-206ENST00000575346 PXDNLA1KZ92 1463 aa15.86■□□□□ 0.13
USP43-206ENST00000575346 IL6STP40189 918 aaPredicted RBP15.86■□□□□ 0.13
USP43-206ENST00000575346 PRKRIP1Q9H875 184 aaPredicted RBP15.86■□□□□ 0.13
USP43-206ENST00000575346 MAPK8IP3Q9UPT6 1336 aa15.86■□□□□ 0.13
USP43-206ENST00000575346 A0A087WZG4 1122 aa15.85■□□□□ 0.13
USP43-206ENST00000575346 CANXP27824 592 aaKnown RBP15.85■□□□□ 0.13
USP43-206ENST00000575346 DDR1Q08345 913 aa15.85■□□□□ 0.13
USP43-206ENST00000575346 BCL2L12Q9HB09 334 aa15.85■□□□□ 0.13
USP43-206ENST00000575346 NRXN2Q9P2S2 1712 aa15.85■□□□□ 0.13
USP43-206ENST00000575346 KDM3BQ7LBC6 1761 aa15.85■□□□□ 0.13
USP43-206ENST00000575346 POLRMTO00411 1230 aaKnown RBP15.84■□□□□ 0.13
USP43-206ENST00000575346 GIGYF1O75420 1035 aaPredicted RBP15.84■□□□□ 0.13
USP43-206ENST00000575346 SNRPA1P09661 255 aaKnown RBP15.84■□□□□ 0.13
USP43-206ENST00000575346 PNISRQ8TF01 805 aaKnown RBP15.84■□□□□ 0.13
USP43-206ENST00000575346 USP16Q9Y5T5 823 aa15.84■□□□□ 0.13
USP43-206ENST00000575346 SCN7AQ01118 1682 aa15.83■□□□□ 0.12
USP43-206ENST00000575346 N4BP2Q86UW6 1770 aaPredicted RBP15.82■□□□□ 0.12
USP43-206ENST00000575346 BRCA1P38398 1863 aaKnown RBP15.82■□□□□ 0.12
USP43-206ENST00000575346 A1BGP04217 495 aa15.82■□□□□ 0.12
USP43-206ENST00000575346 NFIXQ14938 502 aa15.82■□□□□ 0.12
USP43-206ENST00000575346 PRAMEF22A3QJZ6 481 aa15.81■□□□□ 0.12
USP43-206ENST00000575346 AFDNP55196 1824 aaKnown RBP15.81■□□□□ 0.12
USP43-206ENST00000575346 LAMB4A4D0S4 1761 aa15.8■□□□□ 0.12
USP43-206ENST00000575346 DPEP1P16444 411 aa15.8■□□□□ 0.12
USP43-206ENST00000575346 KCNA3P22001 575 aa15.8■□□□□ 0.12
USP43-206ENST00000575346 TMPOP42166 694 aaKnown RBP15.8■□□□□ 0.12
USP43-206ENST00000575346 BCORQ6W2J9 1755 aa15.8■□□□□ 0.12
USP43-206ENST00000575346 A0A0G2JLW4 131 aa15.79■□□□□ 0.12
USP43-206ENST00000575346 RIPK4P57078 832 aa15.79■□□□□ 0.12
USP43-206ENST00000575346 THUMPD2Q9BTF0 503 aaKnown RBP15.79■□□□□ 0.12
USP43-206ENST00000575346 BABAM1Q9NWV8 329 aa15.79■□□□□ 0.12
USP43-206ENST00000575346 MIS18AQ9NYP9 233 aa15.79■□□□□ 0.12
USP43-206ENST00000575346 RGL2O15211 777 aa15.78■□□□□ 0.12
USP43-206ENST00000575346 CAMTA2O94983 1202 aa15.78■□□□□ 0.12
USP43-206ENST00000575346 SERPINB2P05120 415 aa15.78■□□□□ 0.12
USP43-206ENST00000575346 EIF4A1P60842 406 aaKnown RBP15.78■□□□□ 0.12
USP43-206ENST00000575346 LMOD3Q0VAK6 560 aa15.78■□□□□ 0.12
USP43-206ENST00000575346 NPM2Q86SE8 214 aaKnown RBP15.78■□□□□ 0.12
USP43-206ENST00000575346 RUNDC1Q96C34 613 aa15.78■□□□□ 0.12
USP43-206ENST00000575346 TBC1D2BQ9UPU7 963 aa15.78■□□□□ 0.12
USP43-206ENST00000575346 NBPF26B4DH59 902 aa15.77■□□□□ 0.12
USP43-206ENST00000575346 WDR43Q15061 677 aaKnown RBP eCLIP15.77■□□□□ 0.12
USP43-206ENST00000575346 NBPF10Q6P3W6 841 aaKnown RBP15.77■□□□□ 0.12
USP43-206ENST00000575346 NBPF15Q8N660 670 aa15.77■□□□□ 0.12
USP43-206ENST00000575346 ADAMTS8Q9UP79 889 aa15.77■□□□□ 0.12
USP43-206ENST00000575346 ARFGEF1Q9Y6D6 1849 aa15.77■□□□□ 0.11
USP43-206ENST00000575346 TBC1D9BQ66K14 1250 aa15.76■□□□□ 0.11
USP43-206ENST00000575346 CLEC4GQ6UXB4 293 aa15.76■□□□□ 0.11
USP43-206ENST00000575346 DZIP3Q86Y13 1208 aaKnown RBP15.76■□□□□ 0.11
USP43-206ENST00000575346 PIM2Q9P1W9 311 aa15.76■□□□□ 0.11
USP43-206ENST00000575346 ADCY9O60503 1353 aa15.75■□□□□ 0.11
USP43-206ENST00000575346 WWC3Q9ULE0 1092 aa15.75■□□□□ 0.11
USP43-206ENST00000575346 BCS1LQ9Y276 419 aa15.75■□□□□ 0.11
USP43-206ENST00000575346 ZNF330Q9Y3S2 320 aaPredicted RBP15.75■□□□□ 0.11
USP43-206ENST00000575346 DLEC1Q9Y238 1755 aa15.75■□□□□ 0.11
USP43-206ENST00000575346 CARMIL3Q8ND23 1372 aa15.75■□□□□ 0.11
USP43-206ENST00000575346 PIP4K2AP48426 406 aaPredicted RBP15.74■□□□□ 0.11
USP43-206ENST00000575346 CCDC146Q8IYE0 955 aa15.74■□□□□ 0.11
USP43-206ENST00000575346 ZNF316A6NFI3 1004 aaPredicted RBP15.73■□□□□ 0.11
USP43-206ENST00000575346 CHRNA5P30532 468 aa15.73■□□□□ 0.11
USP43-206ENST00000575346 BICDL1Q6ZP65 573 aa15.73■□□□□ 0.11
USP43-206ENST00000575346 TSPYL4Q9UJ04 414 aa15.73■□□□□ 0.11
USP43-206ENST00000575346 TRIM35Q9UPQ4 493 aa15.73■□□□□ 0.11
USP43-206ENST00000575346 PDZRN3Q9UPQ7 1066 aa15.73■□□□□ 0.11
USP43-206ENST00000575346 ATP10DQ9P241 1426 aa15.73■□□□□ 0.11
USP43-206ENST00000575346 ERBB4Q15303 1308 aa15.72■□□□□ 0.11
USP43-206ENST00000575346 DALRD3Q5D0E6 543 aaKnown RBP15.72■□□□□ 0.11
USP43-206ENST00000575346 SETDB2Q96T68 719 aa15.72■□□□□ 0.11
USP43-206ENST00000575346 ZNF652Q9Y2D9 606 aa15.72■□□□□ 0.11
USP43-206ENST00000575346 CEP350Q5VT06 3117 aa15.72■□□□□ 0.11
USP43-206ENST00000575346 ANKRD31Q8N7Z5 1873 aa15.71■□□□□ 0.11
USP43-206ENST00000575346 CHL1O00533 1208 aa15.71■□□□□ 0.11
USP43-206ENST00000575346 PRR5LQ6MZQ0 368 aa15.71■□□□□ 0.11
USP43-206ENST00000575346 BRIP1Q9BX63 1249 aa15.71■□□□□ 0.11
USP43-206ENST00000575346 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
USP43-206ENST00000575346 RRP7AQ9Y3A4 280 aaKnown RBP15.71■□□□□ 0.11
USP43-206ENST00000575346 NEUROD2Q15784 382 aa15.7■□□□□ 0.1
USP43-206ENST00000575346 ERVV-1B6SEH8 477 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms