RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 MYBBP1AQ9BQG0 1328 aaKnown RBP26.16■■□□□ 1.78
SCARF1-208ENST00000574545 TM4SF1P30408 202 aa26.16■■□□□ 1.78
SCARF1-208ENST00000574545 EIF5P55010 431 aaKnown RBP26.16■■□□□ 1.78
SCARF1-208ENST00000574545 NARFQ9UHQ1 456 aa26.16■■□□□ 1.78
SCARF1-208ENST00000574545 KIF13BQ9NQT8 1826 aa26.16■■□□□ 1.78
SCARF1-208ENST00000574545 GRIN3BO60391 1043 aa26.15■■□□□ 1.78
SCARF1-208ENST00000574545 USPL1Q5W0Q7 1092 aa26.15■■□□□ 1.78
SCARF1-208ENST00000574545 COL15A1P39059 1388 aa26.15■■□□□ 1.78
SCARF1-208ENST00000574545 C10orf71Q711Q0 1435 aa26.14■■□□□ 1.78
SCARF1-208ENST00000574545 CANXP27824 592 aaKnown RBP26.14■■□□□ 1.78
SCARF1-208ENST00000574545 DDR1Q08345 913 aa26.14■■□□□ 1.78
SCARF1-208ENST00000574545 BCL2L12Q9HB09 334 aa26.14■■□□□ 1.78
SCARF1-208ENST00000574545 PARP3Q9Y6F1 533 aa26.14■■□□□ 1.78
SCARF1-208ENST00000574545 ZPR1O75312 459 aa26.13■■□□□ 1.77
SCARF1-208ENST00000574545 ZEB1P37275 1124 aaPredicted RBP26.13■■□□□ 1.77
SCARF1-208ENST00000574545 NFE2L2Q16236 605 aa26.13■■□□□ 1.77
SCARF1-208ENST00000574545 PNNQ9H307 717 aaKnown RBP26.13■■□□□ 1.77
SCARF1-208ENST00000574545 NEFMP07197 916 aa26.12■■□□□ 1.77
SCARF1-208ENST00000574545 TGFB2P61812 414 aa26.12■■□□□ 1.77
SCARF1-208ENST00000574545 TAF7Q15545 349 aaPredicted RBP26.12■■□□□ 1.77
SCARF1-208ENST00000574545 DLG5Q8TDM6 1919 aa26.12■■□□□ 1.77
SCARF1-208ENST00000574545 KIAA1551Q9HCM1 1747 aa26.11■■□□□ 1.77
SCARF1-208ENST00000574545 USP16Q9Y5T5 823 aa26.11■■□□□ 1.77
SCARF1-208ENST00000574545 PXDNLA1KZ92 1463 aa26.11■■□□□ 1.77
SCARF1-208ENST00000574545 POLRMTO00411 1230 aaKnown RBP26.1■■□□□ 1.77
SCARF1-208ENST00000574545 PRKRIP1Q9H875 184 aaPredicted RBP26.1■■□□□ 1.77
SCARF1-208ENST00000574545 PRAMEF22A3QJZ6 481 aa26.09■■□□□ 1.77
SCARF1-208ENST00000574545 A1BGP04217 495 aa26.09■■□□□ 1.77
SCARF1-208ENST00000574545 IL6STP40189 918 aaPredicted RBP26.09■■□□□ 1.77
SCARF1-208ENST00000574545 NFIXQ14938 502 aa26.07■■□□□ 1.76
SCARF1-208ENST00000574545 ZNF784Q8NCA9 323 aaPredicted RBP26.07■■□□□ 1.76
SCARF1-208ENST00000574545 MIS18AQ9NYP9 233 aa26.07■■□□□ 1.76
SCARF1-208ENST00000574545 A0A087WZG4 1122 aa26.06■■□□□ 1.76
SCARF1-208ENST00000574545 A0A0G2JLW4 131 aa26.06■■□□□ 1.76
SCARF1-208ENST00000574545 SNRPA1P09661 255 aaKnown RBP26.06■■□□□ 1.76
SCARF1-208ENST00000574545 MAPK8IP3Q9UPT6 1336 aa26.06■■□□□ 1.76
SCARF1-208ENST00000574545 KCNA3P22001 575 aa26.05■■□□□ 1.76
SCARF1-208ENST00000574545 WWC3Q9ULE0 1092 aa26.05■■□□□ 1.76
SCARF1-208ENST00000574545 DPEP1P16444 411 aa26.04■■□□□ 1.76
SCARF1-208ENST00000574545 THUMPD2Q9BTF0 503 aaKnown RBP26.04■■□□□ 1.76
SCARF1-208ENST00000574545 N4BP2Q86UW6 1770 aaPredicted RBP26.04■■□□□ 1.76
SCARF1-208ENST00000574545 PNISRQ8TF01 805 aaKnown RBP26.03■■□□□ 1.76
SCARF1-208ENST00000574545 TBC1D2BQ9UPU7 963 aa26.02■■□□□ 1.76
SCARF1-208ENST00000574545 TMPOP42166 694 aaKnown RBP26.01■■□□□ 1.75
SCARF1-208ENST00000574545 RIPK4P57078 832 aa26.01■■□□□ 1.75
SCARF1-208ENST00000574545 NRXN2Q9P2S2 1712 aa26.01■■□□□ 1.75
SCARF1-208ENST00000574545 KDM3BQ7LBC6 1761 aa26■■□□□ 1.75
SCARF1-208ENST00000574545 NBPF26B4DH59 902 aa25.99■■□□□ 1.75
SCARF1-208ENST00000574545 CAMTA2O94983 1202 aa25.99■■□□□ 1.75
SCARF1-208ENST00000574545 SERPINB2P05120 415 aa25.99■■□□□ 1.75
SCARF1-208ENST00000574545 PIP4K2AP48426 406 aaPredicted RBP25.99■■□□□ 1.75
SCARF1-208ENST00000574545 EIF4A1P60842 406 aaKnown RBP25.99■■□□□ 1.75
SCARF1-208ENST00000574545 NBPF10Q6P3W6 841 aaKnown RBP25.99■■□□□ 1.75
SCARF1-208ENST00000574545 NBPF15Q8N660 670 aa25.99■■□□□ 1.75
SCARF1-208ENST00000574545 AFDNP55196 1824 aaKnown RBP25.99■■□□□ 1.75
SCARF1-208ENST00000574545 BRCA1P38398 1863 aaKnown RBP25.98■■□□□ 1.75
SCARF1-208ENST00000574545 TBC1D9BQ66K14 1250 aa25.98■■□□□ 1.75
SCARF1-208ENST00000574545 ADAMTS8Q9UP79 889 aa25.98■■□□□ 1.75
SCARF1-208ENST00000574545 ZNF330Q9Y3S2 320 aaPredicted RBP25.98■■□□□ 1.75
SCARF1-208ENST00000574545 GIGYF1O75420 1035 aaPredicted RBP25.97■■□□□ 1.75
SCARF1-208ENST00000574545 SCN7AQ01118 1682 aa25.96■■□□□ 1.75
SCARF1-208ENST00000574545 CCDC146Q8IYE0 955 aa25.96■■□□□ 1.75
SCARF1-208ENST00000574545 BCS1LQ9Y276 419 aa25.96■■□□□ 1.75
SCARF1-208ENST00000574545 DZIP3Q86Y13 1208 aaKnown RBP25.95■■□□□ 1.74
SCARF1-208ENST00000574545 RUNDC1Q96C34 613 aa25.95■■□□□ 1.74
SCARF1-208ENST00000574545 CHRNA5P30532 468 aa25.94■■□□□ 1.74
SCARF1-208ENST00000574545 WDR43Q15061 677 aaKnown RBP eCLIP25.94■■□□□ 1.74
SCARF1-208ENST00000574545 BICDL1Q6ZP65 573 aa25.94■■□□□ 1.74
SCARF1-208ENST00000574545 PIM2Q9P1W9 311 aa25.94■■□□□ 1.74
SCARF1-208ENST00000574545 NPM2Q86SE8 214 aaKnown RBP25.93■■□□□ 1.74
SCARF1-208ENST00000574545 RRP7AQ9Y3A4 280 aaKnown RBP25.93■■□□□ 1.74
SCARF1-208ENST00000574545 BABAM1Q9NWV8 329 aa25.92■■□□□ 1.74
SCARF1-208ENST00000574545 TRIM35Q9UPQ4 493 aa25.92■■□□□ 1.74
SCARF1-208ENST00000574545 LMOD3Q0VAK6 560 aa25.91■■□□□ 1.74
SCARF1-208ENST00000574545 CLEC4GQ6UXB4 293 aa25.91■■□□□ 1.74
SCARF1-208ENST00000574545 ADCY9O60503 1353 aa25.91■■□□□ 1.74
SCARF1-208ENST00000574545 CARMIL3Q8ND23 1372 aa25.91■■□□□ 1.74
SCARF1-208ENST00000574545 BCORQ6W2J9 1755 aa25.9■■□□□ 1.74
SCARF1-208ENST00000574545 RGL2O15211 777 aa25.9■■□□□ 1.74
SCARF1-208ENST00000574545 LAMB4A4D0S4 1761 aa25.9■■□□□ 1.74
SCARF1-208ENST00000574545 ZNF316A6NFI3 1004 aaPredicted RBP25.89■■□□□ 1.74
SCARF1-208ENST00000574545 PRR5LQ6MZQ0 368 aa25.89■■□□□ 1.74
SCARF1-208ENST00000574545 TSPYL4Q9UJ04 414 aa25.89■■□□□ 1.74
SCARF1-208ENST00000574545 NEUROD2Q15784 382 aa25.88■■□□□ 1.73
SCARF1-208ENST00000574545 DALRD3Q5D0E6 543 aaKnown RBP25.88■■□□□ 1.73
SCARF1-208ENST00000574545 SETDB2Q96T68 719 aa25.88■■□□□ 1.73
SCARF1-208ENST00000574545 ARFGEF1Q9Y6D6 1849 aa25.88■■□□□ 1.73
SCARF1-208ENST00000574545 ATP10DQ9P241 1426 aa25.86■■□□□ 1.73
SCARF1-208ENST00000574545 CHL1O00533 1208 aa25.85■■□□□ 1.73
SCARF1-208ENST00000574545 ARHGAP27Q6ZUM4 889 aa25.85■■□□□ 1.73
SCARF1-208ENST00000574545 BRIP1Q9BX63 1249 aa25.85■■□□□ 1.73
SCARF1-208ENST00000574545 CCDC184Q52MB2 194 aa25.84■■□□□ 1.73
SCARF1-208ENST00000574545 ANKRD31Q8N7Z5 1873 aa25.83■■□□□ 1.73
SCARF1-208ENST00000574545 HLFQ16534 295 aa25.83■■□□□ 1.73
SCARF1-208ENST00000574545 C2CD5Q86YS7 1000 aa25.83■■□□□ 1.73
SCARF1-208ENST00000574545 CCDC24Q8N4L8 307 aa25.83■■□□□ 1.73
SCARF1-208ENST00000574545 ZNF652Q9Y2D9 606 aa25.83■■□□□ 1.73
SCARF1-208ENST00000574545 LRP10Q7Z4F1 713 aa25.82■■□□□ 1.72
SCARF1-208ENST00000574545 ERBB4Q15303 1308 aa25.82■■□□□ 1.72
SCARF1-208ENST00000574545 DLEC1Q9Y238 1755 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms