RNA–Protein interactions for RNA: ENST00000574137.1

NUBP1-206, Transcript of nucleotide binding protein 1, humanhuman

TSL 1 (best)

Gene NUBP1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1-206ENST00000574137 NEFMP07197 916 aa18.17■□□□□ 0.5
NUBP1-206ENST00000574137 DDR1Q08345 913 aa18.17■□□□□ 0.5
NUBP1-206ENST00000574137 FMNL2Q96PY5 1086 aa18.17■□□□□ 0.5
NUBP1-206ENST00000574137 TEX13AQ9BXU3 409 aaPredicted RBP18.17■□□□□ 0.5
NUBP1-206ENST00000574137 NARFQ9UHQ1 456 aa18.17■□□□□ 0.5
NUBP1-206ENST00000574137 PXDNLA1KZ92 1463 aa18.17■□□□□ 0.5
NUBP1-206ENST00000574137 COL15A1P39059 1388 aa18.17■□□□□ 0.5
NUBP1-206ENST00000574137 ZNF330Q9Y3S2 320 aaPredicted RBP18.16■□□□□ 0.5
NUBP1-206ENST00000574137 GIGYF1O75420 1035 aaPredicted RBP18.15■□□□□ 0.5
NUBP1-206ENST00000574137 MCM10Q7L590 875 aa18.15■□□□□ 0.5
NUBP1-206ENST00000574137 NPM2Q86SE8 214 aaKnown RBP18.15■□□□□ 0.5
NUBP1-206ENST00000574137 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
NUBP1-206ENST00000574137 N4BP2Q86UW6 1770 aaPredicted RBP18.14■□□□□ 0.5
NUBP1-206ENST00000574137 A0A087WZG4 1122 aa18.14■□□□□ 0.49
NUBP1-206ENST00000574137 POLRMTO00411 1230 aaKnown RBP18.14■□□□□ 0.49
NUBP1-206ENST00000574137 TM4SF1P30408 202 aa18.14■□□□□ 0.49
NUBP1-206ENST00000574137 CEMIPQ8WUJ3 1361 aa18.14■□□□□ 0.49
NUBP1-206ENST00000574137 KIF13BQ9NQT8 1826 aa18.14■□□□□ 0.49
NUBP1-206ENST00000574137 KCNQ3O43525 872 aa18.13■□□□□ 0.49
NUBP1-206ENST00000574137 ARHGAP27Q6ZUM4 889 aa18.13■□□□□ 0.49
NUBP1-206ENST00000574137 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
NUBP1-206ENST00000574137 EIF5P55010 431 aaKnown RBP18.12■□□□□ 0.49
NUBP1-206ENST00000574137 C1QTNF8P60827 252 aa18.12■□□□□ 0.49
NUBP1-206ENST00000574137 DCTN1Q14203 1278 aa18.12■□□□□ 0.49
NUBP1-206ENST00000574137 NFIXQ14938 502 aa18.12■□□□□ 0.49
NUBP1-206ENST00000574137 ZNF526Q8TF50 670 aaPredicted RBP18.12■□□□□ 0.49
NUBP1-206ENST00000574137 PIM2Q9P1W9 311 aa18.12■□□□□ 0.49
NUBP1-206ENST00000574137 ATP10DQ9P241 1426 aa18.12■□□□□ 0.49
NUBP1-206ENST00000574137 A1BGP04217 495 aa18.11■□□□□ 0.49
NUBP1-206ENST00000574137 BICDL1Q6ZP65 573 aa18.11■□□□□ 0.49
NUBP1-206ENST00000574137 GPBP1L1Q9HC44 474 aaPredicted RBP18.11■□□□□ 0.49
NUBP1-206ENST00000574137 HTATSF1O43719 755 aaKnown RBP18.1■□□□□ 0.49
NUBP1-206ENST00000574137 KCNA3P22001 575 aa18.1■□□□□ 0.49
NUBP1-206ENST00000574137 CHRNA5P30532 468 aa18.1■□□□□ 0.49
NUBP1-206ENST00000574137 BCL2L12Q9HB09 334 aa18.1■□□□□ 0.49
NUBP1-206ENST00000574137 TBC1D2BQ9UPU7 963 aa18.1■□□□□ 0.49
NUBP1-206ENST00000574137 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
NUBP1-206ENST00000574137 SERPINB2P05120 415 aa18.09■□□□□ 0.49
NUBP1-206ENST00000574137 IL6STP40189 918 aaPredicted RBP18.09■□□□□ 0.49
NUBP1-206ENST00000574137 DDX10Q13206 875 aaKnown RBP18.09■□□□□ 0.49
NUBP1-206ENST00000574137 DALRD3Q5D0E6 543 aaKnown RBP18.09■□□□□ 0.49
NUBP1-206ENST00000574137 PNNQ9H307 717 aaKnown RBP18.08■□□□□ 0.48
NUBP1-206ENST00000574137 KIAA1551Q9HCM1 1747 aa18.08■□□□□ 0.48
NUBP1-206ENST00000574137 SENP3-EIF4A1A0A087X0R7 540 aa18.07■□□□□ 0.48
NUBP1-206ENST00000574137 SNRPA1P09661 255 aaKnown RBP18.07■□□□□ 0.48
NUBP1-206ENST00000574137 TAF7Q15545 349 aaPredicted RBP18.07■□□□□ 0.48
NUBP1-206ENST00000574137 USP16Q9Y5T5 823 aa18.07■□□□□ 0.48
NUBP1-206ENST00000574137 MAPK8IP3Q9UPT6 1336 aa18.06■□□□□ 0.48
NUBP1-206ENST00000574137 RALBP1Q15311 655 aa18.06■□□□□ 0.48
NUBP1-206ENST00000574137 ADCY9O60503 1353 aa18.05■□□□□ 0.48
NUBP1-206ENST00000574137 PRAMEF22A3QJZ6 481 aa18.05■□□□□ 0.48
NUBP1-206ENST00000574137 PIP4K2AP48426 406 aaPredicted RBP18.05■□□□□ 0.48
NUBP1-206ENST00000574137 TBC1D9BQ66K14 1250 aa18.05■□□□□ 0.48
NUBP1-206ENST00000574137 MIS18AQ9NYP9 233 aa18.05■□□□□ 0.48
NUBP1-206ENST00000574137 NPHP1O15259 732 aa18.04■□□□□ 0.48
NUBP1-206ENST00000574137 NFE2L2Q16236 605 aa18.04■□□□□ 0.48
NUBP1-206ENST00000574137 DZIP3Q86Y13 1208 aaKnown RBP18.04■□□□□ 0.48
NUBP1-206ENST00000574137 PLEKHF1Q96S99 279 aa18.04■□□□□ 0.48
NUBP1-206ENST00000574137 AFDNP55196 1824 aaKnown RBP18.03■□□□□ 0.48
NUBP1-206ENST00000574137 C2CD5Q86YS7 1000 aa18.03■□□□□ 0.48
NUBP1-206ENST00000574137 SETDB2Q96T68 719 aa18.03■□□□□ 0.48
NUBP1-206ENST00000574137 H0YIN7 160 aa18.02■□□□□ 0.48
NUBP1-206ENST00000574137 BRCA1P38398 1863 aaKnown RBP18.02■□□□□ 0.48
NUBP1-206ENST00000574137 PNISRQ8TF01 805 aaKnown RBP18.02■□□□□ 0.48
NUBP1-206ENST00000574137 CAMTA2O94983 1202 aa18.01■□□□□ 0.47
NUBP1-206ENST00000574137 C9orf131Q5VYM1 1079 aa18.01■□□□□ 0.47
NUBP1-206ENST00000574137 CCDC24Q8N4L8 307 aa18.01■□□□□ 0.47
NUBP1-206ENST00000574137 THUMPD2Q9BTF0 503 aaKnown RBP18.01■□□□□ 0.47
NUBP1-206ENST00000574137 TTLL6Q8N841 843 aa18■□□□□ 0.47
NUBP1-206ENST00000574137 ARFGEF1Q9Y6D6 1849 aa18■□□□□ 0.47
NUBP1-206ENST00000574137 ZNF622Q969S3 477 aaKnown RBP eCLIP17.99■□□□□ 0.47
NUBP1-206ENST00000574137 ZNF652Q9Y2D9 606 aa17.99■□□□□ 0.47
NUBP1-206ENST00000574137 CARMIL3Q8ND23 1372 aa17.99■□□□□ 0.47
NUBP1-206ENST00000574137 DLG5Q8TDM6 1919 aa17.98■□□□□ 0.47
NUBP1-206ENST00000574137 PDE6BP35913 854 aa17.98■□□□□ 0.47
NUBP1-206ENST00000574137 PRR5LQ6MZQ0 368 aa17.98■□□□□ 0.47
NUBP1-206ENST00000574137 CNBD1Q8NA66 436 aa17.98■□□□□ 0.47
NUBP1-206ENST00000574137 BRIP1Q9BX63 1249 aa17.98■□□□□ 0.47
NUBP1-206ENST00000574137 RNF181Q9P0P0 153 aa17.98■□□□□ 0.47
NUBP1-206ENST00000574137 NRXN2Q9P2S2 1712 aa17.98■□□□□ 0.47
NUBP1-206ENST00000574137 MYBBP1AQ9BQG0 1328 aaKnown RBP17.98■□□□□ 0.47
NUBP1-206ENST00000574137 NBPF26B4DH59 902 aa17.97■□□□□ 0.47
NUBP1-206ENST00000574137 RIPK4P57078 832 aa17.97■□□□□ 0.47
NUBP1-206ENST00000574137 ST5P78524 1137 aa17.97■□□□□ 0.47
NUBP1-206ENST00000574137 NBPF10Q6P3W6 841 aaKnown RBP17.97■□□□□ 0.47
NUBP1-206ENST00000574137 NGEFQ8N5V2 710 aa17.97■□□□□ 0.47
NUBP1-206ENST00000574137 NBPF15Q8N660 670 aa17.97■□□□□ 0.47
NUBP1-206ENST00000574137 PDZRN3Q9UPQ7 1066 aa17.97■□□□□ 0.47
NUBP1-206ENST00000574137 SCN7AQ01118 1682 aa17.96■□□□□ 0.47
NUBP1-206ENST00000574137 CLEC4GQ6UXB4 293 aa17.96■□□□□ 0.47
NUBP1-206ENST00000574137 NBPF5PQ86XG9 351 aaPredicted RBP17.96■□□□□ 0.47
NUBP1-206ENST00000574137 EIF4A1P60842 406 aaKnown RBP17.95■□□□□ 0.46
NUBP1-206ENST00000574137 RRP7AQ9Y3A4 280 aaKnown RBP17.95■□□□□ 0.46
NUBP1-206ENST00000574137 KIF3CO14782 793 aa17.94■□□□□ 0.46
NUBP1-206ENST00000574137 RASSF7Q02833 373 aa17.94■□□□□ 0.46
NUBP1-206ENST00000574137 WDR43Q15061 677 aaKnown RBP eCLIP17.94■□□□□ 0.46
NUBP1-206ENST00000574137 ZNF219Q9P2Y4 722 aaPredicted RBP17.94■□□□□ 0.46
NUBP1-206ENST00000574137 TSPYL4Q9UJ04 414 aa17.94■□□□□ 0.46
NUBP1-206ENST00000574137 NIP7Q9Y221 180 aaKnown RBP eCLIP17.94■□□□□ 0.46
NUBP1-206ENST00000574137 FAM177BA6PVY3 158 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms